Columba livia (rock pigeon): 102085533
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Entry
102085533 CDS
T02912
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clv03037
]
102085533 (NPHP4)
Cilium and associated proteins [BR:
clv03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102085533 (NPHP4)
BRITE hierarchy
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Other DBs
NCBI-GeneID:
102085533
NCBI-ProteinID:
XP_021137609
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Position
Unknown
AA seq
1280 aa
AA seq
DB search
MSPERQPGAADRRARLPRSAAFRCVLKHLEGAALTQGAEYQLRLSLFDATHHHFFGRTWR
SGRRAARVTALRPARVAFNETVYFHTSLNHPGITVVVEVVVVAGKEDGGSRHLSCGFGLI
PLFGSGSEAADLAVEDRTLKLYHGTPRALLHPRFQDPLEKNKYLTVMEKSHLQYSLKPHQ
PLEMIFHLLPENLLMSGLQDVPGLLPARGDTGDRLQRPRLLSPVPRYLERLSVRLHPWKP
RDPRGSGLLVQMEVLAVPESWDGRADNPKAACSALISSLCRWLRALAGLGLLCSSARVKG
TLWARGEAADMHSVRWAIWSPVPGAGEAQVELPLRGGPRRGPCQALVYQTPRGGRGSRQG
KHVESGTVQFHVSTDSEEHLVTAAQILRKDRDRLEKPPTPSLRAKRVFVELNSALRSRAV
SVRCCRYLVAFQCFMSLSVSGEPVIPLAGQGGAGGGGSLPVSQLPSPPRGRGRSPVPCGR
SSWQDGAITHLEADLGSPDAEPCAGDQLRALPFTPLSHTPLSRASLARLHAAGFPDILDR
NGEPVEISEPAEPGSFSLQLEEADPLQGNEITLQLLAFGRDARDSEEGTWPRTIFLTFQF
YRFPPVTTPRLQLLGMDGGTAAQLLLRVNKDGTLSTGPPGWQLRYLVDPAFLRAGEQRWF
LRYLAQHSLQIDVWDGDSLLLVGSAALRLEPLLRQGRAAVRTHHELEVATTEYEPEVPEL
GREALRHGALXXXXATRGRLHLCLANVGHPCEDTPEQPPSPRPSRSCAVPDGTGSRFSLS
TVAGESCRPGLAPALCAGPCWQPRGTAGAVLAVSAVVPCGRTPQLLGWQEQRARDLQLVA
AYREHTKGESISQVLSQAIAATRTVHAVLGTAEFFEFTLKNPYGVQHTVTIEIDHPELSV
VLDPREWRHFKELTQSFSPVEEEMFHLHDDLRPQVYLRPNETVRIPFKYQTFSADPAVIA
VQVSFQVSGGKPIALLHVNVEPQPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGAPVGM
PGGEPQMFVRCSDPDIICETKNMGPGEPQDIFLKVAGGPSPQIKKFFVAIYMDAWLAAPV
QIWQFYVHSLQRLGRGSRVRFVLXAGRCGAATGHSRGCSSWCWFPQVDPDGAFVLPASGA
QELRIGVRPRRAGSRFIYLNLVDVESHQLLSSWLLCLACRQPLISKAFEISLPAGGGRGC
NKRITYTNPSPSPRLYFLGTNRPDLLQFKEDSFQVAGGEVYTIGLRFAPSQAAGEEEILI
HINDHEDKNEETFCVKVLYQ
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggagcgccagcccggcgccgcggaccgacgggcccgcctgccgcgctccgcg
gcgttccgctgcgtcctgaagcacctggaaggggccgcgctcacccagggagccgagtac
cagctgcgcctgtcccttttcgatgccacccaccaccacttcttcgggaggacgtggagg
agcggccggcgagctgcccgcgtcaccgcgctgcgcccggccagggtggctttcaacgag
actgtttacttccacacctccctgaaccaccccggcatcaccgtggtcgtggaagtggtg
gtggtcgcggggaaagaggacgggggctctcggcatctctcctgcggctttgggctcatc
ccgctcttcggcagcgggtcggaggctgcggacctggctgtcgaggacagaacgctgaag
ctgtaccacgggacgccgcgcgccttgctgcacccgcgcttccaggaccccctggaaaag
aacaaatacctgacggtgatggagaagagccacttgcagtactccctgaagccccaccag
cccctggagatgatattccacctccttcctgaaaaccttctgatgtccgggctgcaggat
gttcctggcttgctgccggctcgcggggacacgggtgaccgcctgcagaggccgcggctg
ctgagcccggtcccgcgctacctggagcggctgtcggtgcggctgcacccctggaaaccc
cgggacccgcggggttcggggctcctggtgcagatggaagtgttggcggtgccggagagc
tgggacggcagagccgataatcccaaagccgcttgctctgccctaattagcagcttgtgc
aggtggttgcgggcgctggcgggtctgggtttgctctgcagctctgcccgggtgaagggg
acgctgtgggcccgcggtgaggccgctgacatgcactcggtgcgctgggccatctggagc
cccgtccccggagccggggaggcgcaggtggagctgcccctgcgaggcggaccccgccgc
ggcccctgccaagccctggtgtaccagaccccccggggcggccgcggctcccgccagggg
aagcacgtggagtctgggactgtccaattccatgtttccactgattcggaagaacatctt
gtaactgctgcacagatcctacgtaaagacagggacaggttggagaagcctcccacgccg
tcgctgagagcgaagcgagtttttgtcgagctgaactcagctctcaggtcccgtgcggtc
tcggtgcggtgctgcaggtacctcgtggcgtttcagtgttttatgagcttatctgtctcc
ggtgagccggtgatcccgctggcgggtcagggtggtgctggtggggggggcagcctcccg
gtgtcccagctcccatccccaccgcggggcaggggccggtccccggtgccatgtggccgc
agctcttggcaggacggggccataactcacctggaagctgacctgggctcgccggacgcc
gagccttgtgccggtgaccagctgcgggcgctgcccttcaccccgctctcccacacgccg
ctgtcccgcgcgtccctggcgcgcctgcacgccgccggcttcccggacatcctggaccgc
aacggggagccggtggagatctcggagccggcggagccggggagcttcagcctgcagctg
gaagaagccgaccctctgcaaggcaatgaaataaccctgcagctcctggccttcggcagg
gacgcccgggacagcgaggaggggacgtggccgaggaccatcttcctcaccttccagttc
taccgcttcccacctgtcaccacgccgcggctgcagctgctcggcatggatggcgggacc
gcggcacagctcctgctccgggtgaacaaggacgggaccctcagcaccgggccaccgggc
tggcagctcaggtacctggtggatcccgcgttcctgcgcgccggggagcagcgctggttc
ctgcggtacctggcccagcacagcctccagatcgacgtctgggacggagactccctgctc
ctcgtgggctccgctgccctcaggctggagcccctgctgcgccagggccgggcggccgtc
aggacccaccacgagctggaggtggccacgaccgagtacgagccggaggtgccggagctg
ggccgggaggcgctgcggcacggcgccctgnnnnnnnnnnnngccacccggggccgcctc
cacctctgcctggccaacgtcgggcacccgtgcgaggacacaccagagcagccgccgtcc
ccacgcccatcccgctcctgcgcggtcccagacggcaccggcagccggttctccctgagc
actgtcgccggtgagtcctgccggcctgggctcgctccggctctctgtgcgggtccatgt
tggcagccccgtggcaccgcgggggctgtgctggcggtgtctgcagtggtgccatgtggg
aggacgccccagctcttgggctggcaggagcaacgtgcccgggacctgcagctcgtggcc
gcctaccgggagcacacgaagggtgagagcatctcgcaggtgctcagccaggccatcgcc
gccacccgcaccgtgcacgccgtgctgggcactgctgagttcttcgagttcaccctgaag
aacccctacggtgtccagcacaccgtcaccatcgagatcgaccaccctgagctcagtgtc
gtactggacccgagggagtggcggcacttcaaggagctgacgcagagcttctcgccggtg
gaggaggagatgttccacctccacgatgacctcaggcctcaggtgtacctgcgccccaac
gagaccgtccgcatccccttcaaataccagaccttctccgcagaccctgccgtcatcgca
gtgcaggtctccttccaggtgagcggggggaagcccatcgcgctcctgcacgtgaacgtg
gagccgcagccacacgtcgtggaccagaccttccgcttctaccacccggagctcaccttc
ctgaagaagaccatccggctgcccccctggcacaccctccccggcgcgccggtggggatg
ccgggcggggaaccccagatgtttgttcgctgcagcgaccctgacatcatttgcgaaacc
aaaaatatggggcccggggagccgcaggacatcttcttgaaagtagccggaggaccaagc
ccgcagatcaagaagttctttgttgctatttatatggacgcctggctggcggcgccggtg
cagatctggcagttctacgtgcactcgctgcagcggctggggcggggcagtcgggtccgg
tttgtgctctgagctggccgttgtggagctgcgacaggccacagccgtggctgcagctcc
tggtgctggtttccgcaggtggatccggacggcgccttcgtcctccccgccagcggcgcc
caggagctgcgcatcggcgtgcggccgcggcgcgcgggcagccgcttcatctacctcaac
ctggtggacgtggagtcccaccagctgctgtcctcctggctgctgtgcctggcctgccgg
cagccgctcatctccaaggcgttcgagatctcgctgcccgccggcggcgggagaggctgc
aacaagcgcatcacctacaccaacccctccccctcgccgcggctctacttcctgggcacc
aaccgccccgacctgctgcagttcaaggaggattccttccaggtggccggcggggaggtg
tacaccatcgggctgcgcttcgcgcccagccaggcggcgggagaggaggagatcctcatc
cacatcaacgaccacgaggacaagaatgaggaaaccttctgcgtcaaggttctctaccag
tga
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