Columba livia (rock pigeon): 102085714
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Entry
102085714 CDS
T02912
Symbol
CHD5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102085714 (CHD5)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102085714 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
zf-HC5HC2H_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
102085714
NCBI-ProteinID:
XP_021137485
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MIQCGERKRDRVEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEG
RWSCPHCXXXXXXXXXXXXXXXXXXXXXXXXEPKEEEEEEEEGGEEEEDDHMEFCRVCKD
GGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTVSVPNLARLLPAPTALPVPWGQR
PAPCHKPSLENPARVLGLCPAGALGGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMY
RNYQRKNDMDEPPAFDYGSGDEDSQREKRKSKDPQYAKMEERFYRYGIKPEWMMIHRILN
HSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQLYWNHRELMLGEDTRPLKKL
NKKGKKLKEEKLEKPPERPLVDPTVKFDKQPWYIDTTGGTLHPYQLEGLNWLRFSWAQGT
DTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVT
YTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSI
EWACLVVDEAHRLKNNQSKFFRVLNCYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFN
NLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSL
VKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLR
QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
NKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEE
LFKDDVEGTVSQGQRVAVPDAVTPFSDTLSTKGGAATTGMKKKHGGTPPGDNKDVDDSSV
IHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEEN
VDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSI
GSEDEDEDFEERPEGQSGRRQSRLXFKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
AVPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKKSMEIVSSDPTTPVPTSPAHTQ
AGPPALADKPEMQLGFQEEKEQGEHVSRKASDSQVPASAEKGESEEHLESCESKEKPREE
KQEESEKAEPSPEPPLKDEGVPEKEKPLEKPELSSSTGKGEDKEVKAEDAKAEEKEHSEA
QQNGDREDDEDGKKDDRSVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPATQQGSFGSS
QIYNSNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgatacagtgtggagagagaaagagagacagagttgaagaaggggatggctacgagaca
gaccaccaggactactgcgaggtgtgccagcagggcggggagatcatcctgtgcgacacc
tgtccccgcgcctaccacctggtgtgcctggaccccgagctggagaaggcgcccgagggc
aggtggagctgcccccactgcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagccgaaggaggaggaggaggaggag
gaggaaggcggcgaggaggaggaggacgaccacatggagttctgccgggtctgtaaggac
ggcggggagctgctgtgctgcgacacctgcccgtcctcctaccacctgcactgcctgaac
ccgccgctgccagagatccccaacggggaatggctctgccctcgctgtacggtgagtgtc
cccaaccttgctcgcctcctccccgctcccacagccctccctgtgccgtggggccagcgt
cctgccccgtgccacaaaccctccttggagaacccagctcgggttctgggtctctgcccc
gcgggagcgctgggggggatcccggagcgcgagttcttcgtgaaatgggcaggtctgtcc
tactggcactgctcctgggtcaaggagctgcagctggagctctaccacaccgtcatgtac
cgcaactaccaacgcaagaacgacatggacgagccaccggccttcgactacggctctggg
gacgaggacagccagcgggagaagcgcaagagcaaagacccgcagtacgccaagatggag
gagcggttctaccgctatggcatcaagcccgagtggatgatgatccaccgcatcctgaac
cacagttttgacaagaagggagacgtccactacctgatcaagtggaaggacctgccgtac
gaccagtgcacctgggagatcgacgacatcgacatcccgtactacgagaacctcaagcag
ctctactggaaccacagggagctgatgctgggggaggacacgcgcccgctgaagaagctg
aacaagaaagggaaaaagctgaaagaggagaagctggaaaagcccccagaaaggcctctg
gtggatcccacagtgaagttcgacaagcagccgtggtacatcgacaccaccggagggacg
ctccacccgtaccagctggaggggctgaactggctgaggttttcctgggcccaagggaca
gatacaatcctggccgacgagatggggctggggaagacggtgcagactattgtgttcttg
tactccctgtacaaggagggccactcgaaagggccgtacctggtcagcgcccctctctcc
accatcatcaactgggagcgtgagtttgagatgtgggcacctgacttctacgtcgtcacc
tacacgggggacaaagaaagccgctctgtcatccgggagaacgagttttcttttgaggac
aacgccatccgcagtggaaagaaggttttccggatgaagaaggaagcccagatcaagttc
cacgtcctgctcacctcctacgagctgatcaccattgaccaggcggtgctgggctccatc
gagtgggcctgtctggtggtggatgaggcgcacaggctgaagaacaaccagtccaaattc
ttcagagtgttaaactgctacaagatcgattacaagctgctgctcaccgggactccgctc
cagaacaacctggaagagctcttccacctgctcaacttcctgactcccgagaggtttaat
aacctggaggggttcctggaggagtttgctgacatctccaaggaggaccagatcaaaaag
cttcatgatctgctgggtccccacatgctgcggcggctcaaggccgatgtgttcaagaac
atgccggccaagacggagctgatcgtgcgggtggagctgagccagatgcagaagaagtac
tacaagttcatcctgacgaggaatttcgaagccctgaactcgaaaggtggtgggaaccag
gtctcgctgctcaacatcatgatggacctgaagaagtgctgcaaccatccgtatctcttc
ccggtggcggccgtggaggccccggttctgcccaacggatcctacgatgggaattctttg
gtcaaatcttctgggaaactgatgctgctccaaaagatgctgaagaagttacgggatggg
ggtcacagagttctgatcttctctcagatgacgaagatgctggacttactggaggatttc
ctggagtatgaaggctacaagtacgagcggatcgacgggggcatcaccggtggcctgcgc
caggaggccatcgacaggtttaacgctcctggtgctcagcagttctgctttctcctctct
acccgtgctggcggtctgggcataaaccttgctacggccgacacagtcattatttatgat
tctgactggaatccccacaatgacatccaggcgttcagcagagctcaccgcatcgggcag
aacaagaaggtgatgatctaccgcttcgtgaccagagcctcggtggaggagcgcatcacc
caggtggccaagcggaagatgatgctcacgcacctcgtggtgcgcccagggctgggctcc
aagtcgggctccatgaccaagcaggagctggacgacatcctcaagtttgggacggaagag
ctgttcaaggatgatgtggaaggcacggtgtcccagggacagcgcgttgctgtgccagat
gctgtcacccctttctctgataccctgtcaaccaaagggggtgcagcgactactggcatg
aaaaagaagcacggtggtacccccccaggtgacaataaggacgtggatgacagcagcgtg
atccactatgacgatgctgccatctctaagcttctggaccgcaaccaggatgcgaccgat
gacacggagctgcagaacatgaacgagtatctcagctcctttaaagtggcccagtatgtt
gtgagagaagaggacggtgtggaggaggtggaacgcgagatcatcaagcaagaggagaac
gtggaccccgactactgggagaagttgctgcgacaccactacgagcagcagcaggaagat
ctggccaggaacctggggaaagggaagaggatccgcaagcaggtcaactacaacgacacc
tcgcaggaggaccaagagtggcaggatgagctctctgacaaccagtccgagtactccatc
ggctccgaggacgaggacgaagactttgaagagaggccagaaggtcagagtggcaggaga
caatcccggcttntttttaagccgctccctcctctgctggcgagagttggggggaacatc
gaggttctcggcttcaacgcgcggcagcgcaaggcgttcctgaacgccatcatgcgctgg
gcggtgccgccccaggacgccttcaactcccactggctggtgcgggacctgcgcgggaag
agcgagaaggagttcagggcctacgtctccctcttcatgagacatctgtgtgaacccggg
gcagacggtgccgaaacctttgcggacggcgttccccgggaagggctgtcccggcagcac
gtgctgacccgcataggggtcatgtcgctagtgaggaagaaggtccaggagttcgagcat
gtcaacgggaagtacagcaccccggacctggttctcgagggcccggagagcaagaagtcc
atggagattgtgtcttcagaccccaccacccccgtccccaccagccccgcgcacacgcag
gcgggaccgccagccctggcagacaaaccagaaatgcagctggggttccaggaggagaag
gagcaaggggagcacgtgtccaggaaggcgtctgacagccaggtgcctgcgagtgccgag
aagggggaaagcgaagagcacctggagagctgtgagagcaaggagaaacccagggaggag
aagcaagaggagagtgaaaaggctgagccttctcctgagcccccgctgaaagacgagggg
gttccagagaaggagaagcctttggagaagccggagctgagcagcagcacagggaaaggg
gaagataaagaagtcaaagcagaggatgccaaggcggaggagaaggagcacagcgaggct
cagcaaaacggggacagagaggacgacgaggatggaaagaaggatgacagaagcgtgaac
ttccgattcatgttcaacattgcagatggtggttttacagagctgcacacgctgtggcag
aacgaggagcgggctgccatctcctccggcaagatctatgacatctggcaccgccgacac
gactactggctgctggcaggaattgtcactcacggctacgcccgctggcaggacatccag
aacgacccgcggtacgtgatcctgaacgagcccttcaagtcggaggtgcacaaggggaac
tacctggagatgaagaacaagttcctcgcccggcggttcaagttgctggagcaggccctg
gtgatcgaggagcagctgcggcgggccgcgtacctcaacatgacccaagaccccagtcac
ccggccatggccctgaacgcgcggctggctgaagtggagtgccttgccgagagccaccag
cacctctccaaagagtccctggccggcaacaagcctgcgaatgctgtcctgcacaaggtg
ctgaaccagctcgaggagctgctgagcgacatgaaggccgacgtgacgcgcctgccctcc
atgctgtcccgcatcccgcccgtggccgcccggctgcagatgtcggagcggagcatcctc
agccgcctggccacccgtggcggggacccggccacccagcagggctccttcggctcctcc
cagatctacaacagcaactttgggccgaatttccgaggtcctgggccaggcgggattgtc
aactacagccagatgccgctgggaccgtacgtgaccgatatttag
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integrated database retrieval system
