Columba livia (rock pigeon): 102086162
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Entry
102086162 CDS
T02912
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clv04040
]
102086162 (TRPC1)
Ion channels [BR:
clv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102086162 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
102086162
NCBI-ProteinID:
XP_013223582
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MVKKLLEENSSGEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSE
VVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQ
DISLPKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELS
ADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLL
EERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFW
PVLSLCYLLAPKSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALE
RIDYLLIIWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFH
DYAERKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFL
GMFLLVLFSFTIGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSL
AHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWK
FARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWR
NLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGF
RTSKYAMFYPRN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaaactcttagaagaaaacagctcaggcgaaatgaacataaattgtgtggat
gtgcttggacgaaatgccgttaccataaccattgaaaatgaaaacttggacatactacag
cttcttttggattatggctgccagtcatcggacgcgcttttggtggctattgactcggaa
gtggtgggagctgtcgacattctactgaatcaccgaccaaaaagatcctccagaccaacc
attgtaaaactaatggaacgcattcagaatccggagtactcaacgaccatggatgtggca
cctgtcattttagcggctcatcgtaacaactatgaaattctcaccatgctgttaaagcaa
gacatatcattacccaaacctcatgctgtaggttgtgaatgcacactgtgtactgcaaag
aacaaaaaagacagtctgcgacattccaggtttcgtcttgacatttatcggtgtttggcc
agtcctgctttaatcatgttgacagaggaagatccgatcctgcgagcttttgagcttagt
gcggacttgaaagaattaagccttgttgaggttgaattcagaaatgattatgaggagcta
gctcaacagtgcaaaacctttgctaaagatttgcttgcccaagcacggaattcacgggag
ctggaagttattctgaatcacacatctagcgatgaacacgtagacaagcgaggattgttg
gaagaaaggatgaacttaagccgcttaaaacttgcaatcaagtataatcaaaaagagttt
gtggctcagtctaactgccagcagtttctgaacacagtatggtttggccagatggcgggc
tatcgacgcaagcacacgtgcaagaaaattttgactgttttgatggttggcattttctgg
ccggttttgtccctgtgttacttgttagcccctaaatctcgagtaggtcgaataattcac
actccttttatgaagtttattattcatggagcttcgtatttcacatttctgttgttactt
aatttgtattcccttgtctacaatgagaataagaagaatacaatgggaccagcccttgag
agaatagactatcttctgataatatggctgataggaatggtgtggtcggatgttaaaaga
ctctggtatgatggtttagaagactttttagaagaatcccgtaatcagcttagttttgtc
atgaattctctatatttggcaacttttgctctcaaagtagttgcccataacaagtttcat
gattatgctgaaaggaaggactgggatgcgttccatcctaccctggtggcagaaggtctt
tttgcttttgctaatgttcttagttacctgcgtctcttcttcatgtacacaaccagctct
attctgggaccactgcagatttcaatgggacagatgctacaagattttggaaaatttctg
ggcatgtttcttcttgtcttgttctcgttcacaattggattgacgcaactttatgataaa
ggatttactgtaaatgaagaaaaggactgtgcggggattttctgtgaacaacagagcaat
gacacattccactcctttattggcacatgttttgctctgttctggtacatattctccctg
gcacacgtagcaatctttgtcacacgttttagctatggtgaagaattacagtcttttgtg
ggtgctgttattgttggtacctacaatgtggtggttgtgattgtattaactaagctcctt
gtggcaatgcttcataaaagtttccagctgatagcgaatcatgaagataaggaatggaag
tttgctcgtgccaagctttggcttagctacttcgatgacaaatgcacgctacctccacct
ttcaatgtcattccctctcccaagactatctgttatcttttcaacagtctcagtaaatgg
atctgttctcatacatcaagtggcaaagtgaaacgtcagaacagcctaaaggaatggaga
aatctgaagcaaaagagagatgagaattatcaaaaggtgatgtgttgcttagtccaccgt
tacttgacgtccatgagacagaagatgcaaagcacggatcaggcaactgtggaaaacctg
aatgagctgcggcaagacttgtcaaaattccgaaatgaaatgagagacctgcttggcttt
cgaacttctaaatatgctatgttttatccaagaaactaa
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