Columba livia (rock pigeon): 102086543
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Entry
102086543 CDS
T02912
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102086543 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clv04147
]
102086543 (IRF6)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102086543 (IRF6)
Exosome [BR:
clv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102086543 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102086543
NCBI-ProteinID:
XP_021153967
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MEKHWSRASPKFDTAEPYSNVYSTERIGIALNLLTAQGTKDCKRPALQSRAAAITDSPLS
HDSPPTRKSNETRGWRRSGWKTAAGPEGDAPEPETMALHPRRVRLKPWLVAQVDSGMYPG
LIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAWAVETGKYQEGVDEPDPAKWKAQLRC
ALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQGSIINPGSTGSAPWDEKDNDLDDEE
EEELNQSQHVPIQETFPFLNINDSPMAPASAENCSSEAVWPKNEPLDMEMPPTALQHDFF
SSPELWISSLPMTDLEIKFEYRGKETGATTTVSNPQGCRLFYGELGPMPDQEELFGPISL
EQVKFPGTEQITNERQKIFTSRLLDVMDRGLILEVSGHAIYAVRLCQCKVYWSGPCAPSS
TTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQPPYEIYFCFGEEWPDGKPRERKLIV
VQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQLYRLGAKRRGLQE
YL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacactggtcaagagctagtccaaaatttgatactgcagaaccatacagcaac
gtatactcaactgaaagaatagggattgctctgaatctgcttacagctcagggaacaaag
gactgcaagagacctgcgttacaaagccgagctgctgctattacagattcaccactgagt
cacgattctccacctacgaggaaaagcaacgaaacgcgaggctggcggagatcggggtgg
aaaactgcggccgggccggagggggatgcgccagagccagagacaatggcgttacacccg
cgaagagttcgcttgaagccgtggctggtggcgcaggtggacagcgggatgtaccccggg
ctcatctggctcaaccgcgaggccaagcggtttcagatcccctggaaacacgcgactcgg
cacagcccgcagcacgaggaggagaacaccatcttcaaggcttgggctgtggaaacggga
aagtaccaggaaggagtcgatgagccagaccctgcaaagtggaaagcccagctccgatgt
gctctcaacaaaagccgggaatttaatttgatgtacgatggcaccaaggaggtgcctatg
aatcctattaaaatttatgaagtgtgcgatatcccgcagtcccagggatcaatcattaat
ccaggttccactggctcagctccctgggatgaaaaggataatgatcttgatgatgaagag
gaggaagaattgaatcagtctcagcatgtccctattcaagagacatttccatttctcaat
atcaatgattctccaatggctccagccagtgcagaaaactgcagctctgaagctgtgtgg
ccaaagaatgaacctctggatatggaaatgccaccaactgcactgcagcatgacttcttc
agcagcccggagctctggatcagctctctgccaatgacagacctagaaatcaagtttgaa
tatcgaggaaaggagactggagcgacgacgactgttagcaacccacagggatgcagactt
ttctacggagagctgggtcccatgccagaccaggaagagctctttgggcctatcagtttg
gagcaagtcaagtttccaggaacggagcaaatcaccaatgaaaggcagaagatctttacc
agtcggctgctagatgttatggacaggggactgatcctggaggtcagtggccatgccatc
tacgccgtccggctctgccagtgcaaggtgtactggtctggtccctgcgcgccttcctcc
accacaccaaatttgattgagaggcagaagaaagtcaaactcttctgcctggagacattc
ctaagcgagctgattgcccatcagaaaggacaaattgagaaacagccaccatatgagatc
tacttctgttttggagaagaatggcctgacggaaaacccagggagaggaagctgatcgtg
gttcaggtcatcccagttgtggcccggatgatctacgaaatgttttctggtgacttcacg
cgctcctttgacagcggcagcgtgcggctccagatctcgacgcccgacatcaaggacaac
atcgtggctcacctgaagcagctgtaccggcttggtgcaaaacggaggggattacaggaa
tacctctag
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