Columba livia (rock pigeon): 102086781
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Entry
102086781 CDS
T02912
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102086781 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clv03009
]
102086781 (UTP4)
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102086781 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_2nd
ANAPC4_WD40
WDR55
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_ACSF4
Frtz
VID27
PROPPIN
Motif
Other DBs
NCBI-GeneID:
102086781
NCBI-ProteinID:
XP_005504887
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MLRACKIYNFAANYFQEKVIPGHDARSVEALCWAGADRLFGAGLGGAVTEYDLARLSTSC
SVDGGGGPIWSMAANGSGTRLVIGCEDGSIKLFQVVPGGIQFERNLDRRKGRILCLSWHP
SDSHIAAGSIDILRVLDVCSGQTVQRIMVNYHVQKVQRECVVWSVIFLASSTIVTSDSFG
RVQFWDWQRGTLVESHTVSTSSALSLAVSEKEDSIIVGTSTGATYQLQLLPVRVGSLEKR
WVRTKPFQHHTHDVRAVVHSGTALISGGLDAQLVIRSLMEKVQKKGYEAALRKFTFPHRR
LVSCARKARLLLFQFTQHLELWRLGSTDKTGKDGEVLPLRSMPEHLVQLKSKGPEHIYCS
CVSPCGSWIAYSTASRFHLYRLRYEGDSISIAKVPRVPKLLLPAYQLQFAADSGSLFVAS
AQGSIHILQLLEPGGCKHLHTLRPPSETPEAVYLLAVSADGRWVAAVGGDWAIHIYSLKC
FKHHCTVPTYSCAVTALAIHPVTNNLVIAYADQQLFEFSIPEQQYTAWSRMVQNCGLHRL
WLERDTHITHITFNPKNPSHILLHDVYMFCVLDKSLICKKFQPLLFADLLDENCLVVVER
PVMDIKTQLPLPVQQKKFGT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggcctgcaaaatctacaacttcgccgccaactatttccaagagaaggtgatc
cccgggcacgatgcccggtcggtggaagcgctgtgctgggcgggggccgaccggctgttc
ggggctgggctcggtggggctgtcaccgagtacgacctggcgcggctgagcacgtcctgc
tcggtggacggcggcggagggcccatctggagcatggcggccaatggcagcggcacccgg
ctggtgatcggctgtgaggatggttccattaaactcttccaagtcgtgcctgggggcatc
cagtttgagcggaacctggacaggcggaaaggccgcatcctctgtctctcctggcacccg
tcagactctcatatagcagctggctccatcgacatcctccgtgtgctcgacgtctgttca
ggccaaacggtgcagcggatcatggtgaactaccacgtgcagaaggtgcagcgcgagtgt
gtcgtctggagcgtcatcttcctcgccagcagcactattgtcacctctgactcctttggg
agggtgcagttctgggactggcagcgggggacgctggtggagtcccacactgtcagcacc
tcctctgccctctcgctggctgtgtcagagaaggaggacagcatcattgtgggcacctcc
accggggccacttaccagctccagctgctgccggtgcgggtgggcagcctggagaagcgc
tgggtgcggacaaagcccttccagcatcacacccacgacgtgcgagccgtggtgcacagc
gggactgctctcatctctgggggcctggatgcgcagctggtgatccgctcgctgatggag
aaggtgcagaagaagggctatgaggcagcgctccgcaaattcaccttcccccatcgacgc
ctcgtctcctgcgccaggaaagctcggctgctcctcttccagttcacccagcacctggag
ctctggagacttggctccaccgacaagaccggaaaggatggtgaggtccttcccttgcgc
agcatgcctgagcacctcgtgcagctcaagagtaaggggccagagcacatctactgcagc
tgtgtctcaccatgcggcagctggatcgcgtactctactgcctcccgcttccacctctac
cgcctgcggtacgagggtgacagcatcagtattgcgaaggtccccagagtccccaaactg
ctcctcccagcctaccagctccagttcgccgctgactcgggcagcctcttcgtcgcctct
gctcaaggctccatccacatcctccagctgctggagccagggggctgcaaacacctgcac
acgctgcgcccgccatcagagacccccgaggccgtttacctactggcagtgagtgcagac
gggcgctgggtggccgcggtgggcggggactgggcgatccacatctacagcctgaaatgc
ttcaagcatcactgcacagtgcccacctacagctgcgcggtgacagccctcgccatccac
cctgtcaccaacaaccttgtcattgcctacgcggaccagcagctgttcgagttcagcatc
cctgagcagcagtacacggcctggagccgcatggtgcagaactgcgggctgcacaggctc
tggctggagagggacacacacatcacccacatcaccttcaaccccaagaacccctcgcac
atcctgctccacgacgtctacatgttttgtgtcctcgacaagtccctgatctgcaagaag
ttccagcccctgctctttgcggatctgctggatgagaactgcctggtggtggtggagcgg
cctgtcatggacatcaagacccagctgcccctgcccgtccaacagaagaaattcggcacc
tga
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