Columba livia (rock pigeon): 102086957
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Entry
102086957 CDS
T02912
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clv01002
]
102086957 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102086957 (USP38)
Enzymes [BR:
clv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102086957 (USP38)
Peptidases and inhibitors [BR:
clv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102086957 (USP38)
Ubiquitin system [BR:
clv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102086957 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
DUF6221
Motif
Other DBs
NCBI-GeneID:
102086957
NCBI-ProteinID:
XP_005499952
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAAVQKFTILI
DVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVSLVQSFKRDGL
PSSTAFLMQLTELIHCMMYHYSGFPELYEPILEAIKDMPKPSEEKIKLILSQSAWTSQSS
SLPSCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRHVLSLNLNGCNSLMRK
LQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEERTLKALS
STKTSEGTTNEESQTQEAVHKAQVFAEAPCVGSEERTLIEKMFGGKLKTTICCLNCKSTS
QKEEAFTDLSLAFCPPTSLENIDPKCVERSEVKDDYMVQTNTTATSPAGETPLNNLEANG
GHDTVMNEGTIKDFSTEPDSENTTNSELNKVQDNGDMSQRLVGKNTPSVTDLLNYFLAPE
ILSGDNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIRRKILDNVSLPLV
LELPVKRATCPLAVVSGSWSVGVEISDIGENLAKKLKPSGADEVTCPQLVPYTLSSVVVH
SGVSSESGHYYSYARNVTGSGPSGLCHQSTALSLVSPQAKLLTEESPCTVLENELDPEMP
REWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQNSTSGFSTNSANGLWVNGDPP
LQKDLMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCGPTGGGGG
GGFSTVGRLVF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgattacagtactcatcaggagccttactacagatccaaatgtgaaagatgcaagtatg
acccaagctctgtgcagaatgatagactggttgtcctggcctctggctcagcatgtggaa
acatgggtgattgcactgctgaagggactggctgcagtccagaagtttaccatcctcatt
gatgtcactctgcttaagattgaattggtctttaatcgactttggtttcctctagtgagg
cctggtgcccttgctgtcctttctcacatgttgcttagttttcagcattctccagaagct
tttcatttgattgtcccacatgtggtcagtttggttcagtccttcaaaagagatggctta
ccttccagtacagccttcttgatgcagctaacagagttgatacactgtatgatgtatcat
tattcaggatttccagagctctatgaacccattctggaagctattaaggatatgcccaaa
cccagtgaagagaaaattaagttgattctcagtcagagtgcctggacttctcaatccagt
tctttgccatcttgtctatctagactttctggaaagtctgaaacggggaagacaggtcta
attaatttaggaaatacttgctacatgaacagtgttattcaggcactttttatggctaca
gattttagaagacatgttttatctctaaatctaaatgggtgtaattcactaatgagaaaa
ttacagcatctttttgcatttttggcccatacccagagggaagcatatgctcctagaatt
ttctttgaggcctccagaccaccgtggttcacccctcgatcccagcaggattgctcggaa
tatctcagattcctgctagacaggctgcatgaagaagagagaaccttgaaagcgttgtct
tcaacaaagacttctgaaggtacaacaaatgaagagtcccagacacaagaagctgtccat
aaagcacaggtatttgcagaagcaccttgtgtgggaagtgaagaaagaactctgatagag
aagatgtttggaggaaaattgaagactactatatgctgtttgaactgcaaaagtacatct
caaaaggaagaagcttttacagatctttctctggctttctgccctccaacttccttggag
aacattgacccaaaatgtgtggaacgttctgaagtgaaagatgactatatggtgcaaact
aacactacagcaactagtcctgctggagaaacacctctcaataatttggaagcaaatggt
ggacatgacacagtaatgaatgaaggaactataaaagatttttctactgagccagactct
gagaataccacaaattcagaactcaacaaagttcaagataatggggatatgtctcagagg
ctagtaggtaaaaacactccatcagttacagacttactgaattattttctggcacctgag
atcctcagtggagacaataagtattattgtgaaaagtgtgcctctctacagaatgctgag
aaaactatgcaaatcattgaggaacctgaatacctcattctcactcttttgagattttct
tatgatcctaagtgtcatataaggcgcaaaatcctggacaatgtgtctctgccactggtt
ttggaactgccagtcaaaagagcaacatgccctctggctgtggtttccggcagttggtct
gttggtgttgagatttctgatattggagaaaatcttgctaaaaaactgaagccatcaggt
gctgatgaagtgacctgcccacaactagtgccctacacgttaagctctgtggtggtgcat
tctggtgtatcctctgaaagcggacattattattcatatgctagaaatgttactgggtca
gggccgtcaggactctgccaccagtctacagctctttctttagtttctcctcaggctaag
ctgctgacagaggagagtccttgtactgttttagaaaatgagttggaccctgaaatgcca
agagaatggtttctgttcaatgacagcagagtgacatttacctcatttcagtcagtccag
aaaattaccagtagatttccaaaggacactgcttatgttctgttttacaaaaaacagaat
agcaccagtggcttcagcaccaattcagcaaatggactctgggtaaatggagaccctccc
ctacaaaaagacctcatggatgcaattacaaaagataacaaactgtacttgcaggagcag
gagcttagtgctcgaacacaagcacttcaagctgcctcagcctcgtgctctttccgaccc
aatggatttgatgacaatgaccccccgggaagttgtggaccaacaggtggaggaggaggg
ggtgggttcagtacagttggtagattagtcttttga
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integrated database retrieval system
