Columba livia (rock pigeon): 102086999
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Entry
102086999 CDS
T02912
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102086999 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102086999 (EDC4)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102086999 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
102086999 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
NBCH_WD40
WDR55
Motif
Other DBs
NCBI-GeneID:
102086999
NCBI-ProteinID:
XP_013225940
UniProt:
A0A2I0LPQ8
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MKAGSDFSKTLWSGTWFSSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSIS
LGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQ
KYYYGNLIAVSNSYLAYAIRAATNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSN
QLACLDEAGNLFVWRLAMDKDKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGE
EGSQTLALLHEDRAEVWDLDIIRANNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGT
VLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFL
ITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKV
LYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLCVE
GAQGSGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSTSMPSHGSHDEFAFPDHM
ADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSASLQQ
IAVSPGSSVSSLTAVTAMSSTSVTDASMPRPSEDLTVSPKMQLDTSLTLSSSSSSLQTSP
RSHSVLIPGLPDKLAPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERSPDVISSAST
AMSKDIPEIASETLQRSFAAAPSGLPAEVLEPNHHADSMASAASALHLLSPRNRHNSEHS
HHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDE
VEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDW
KTKVSPRASPKLKRKGKKDDGDVNQSPRSSNNQMTPEFQDELMCILRSQQRELSELRQNQ
MELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLS
QSLSTAVCNRLERTVREEMKKTVPQCISKSMDPVAGQLSNTITAKLTAVEGTLKESITKL
VKSKNLTDSVVRATADTLQGPIQSAYXXXXEKSCQSMFQQINDTFKQGTQEYIQQLENHL
KNKKVREQEARDPLLNQLRQLISTFQSTTEQLASTIAASVHAEVQHQLHIIVGNLQESIL
AQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHLDFQSQQTHILQLLQQGH
LNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELK
LNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARRLMIMLQGLV
TPGMS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgggagcgacttttcaaaaactctttggtctggcacctggttcagttccgtg
aatgagaaccagagaccgtccaattcatataacggagacctgaatggactgctggtgcct
gatcccatcgtggccggagatggaccttctttggctaagccagtccatcgcagcatctct
ctgggagccctgcaggagaagcaagtcatctgcctttctggtgatgacagctccacttgc
atagtgatatcagcaaaagatgtggagatagtggccagcagtgattccagcatcaccagt
aaggccagagggagtaacaaggtgaaaattcagcctgttgctagatatgactgggagcag
aaatactattatggcaatctgatagctgtttcaaactcttacctggcttatgccattaga
gctgccactaatggctccgctatggtgcgggtgttgagcgtcagcactgctgagcggacc
ttgctgaaaggattcacaggcggcgtggcagacctggcttttgctcatctcaactccaac
caactggcctgcctggatgaggctggcaacctttttgtctggcgcctggccatggataaa
gacaaaatccaagaggagatcttggttaacatcaagcgacctgacaatacccccttgaac
acctctcgaagaatcatctggtgccctttcatcccagatgataacgaagagagtggtgaa
gagggaagtcagacgctggcattgttgcacgaggacagggcagaggtgtgggatttggac
ataatccgagcaaacaacagctcctggccagtggaagtgcccagcatcaaagaaggcttc
atcgtagtgaaaggccacagcacgtgcctgagcgagggagcgctttctccagatggaact
gtgttggccacagcaagccacgatggttttgtcaaattctggcagatctatattgagggg
caagatgagccaagatgtcttcatgagtggaaacctcacgatggtaggcctctctcctgc
ctgctcttctgtgataaccataaaaagcaagacccagaggttcccttctggaggtttctc
atcacaggtgcagatcagaatagagagctgaagatgtggtgcaccgtgtcttggacctgt
ctgcagactgtccgcttttctcctgacatcttcagctccatgagtattcttcccagcctg
aaagtctgcctggacctctccgctgaatatctgatactgagtgatgtgcaaagaaaagtc
ttgtatgtgatggagctgatgcagaaccaagaggagggaaaagcttatttcagctccatc
tccgagttcctccttacccacccagtgctcagctttggcatccaggcagtgagccgctgc
cggttaaggcacaccgaagtgctcccagcagaagaggaaaatgacaacttatgtgtagaa
ggtgctcagggatccggggctgttgaatcagcagcaggcgtgctgataaaactcttctgt
gtgcacaccaaggccctacaggatgtgcagattagatttcagcctcttcatagccctgac
atgagcacatccatgccttcccatggctctcatgacgaatttgcctttccagatcacatg
gctgatctaagcacagaagggttgggatccgaaaaaggatcggtgcacggctctcaacca
gacctgcggcgtatcgctgatctgcctgtaccagcagatttcctctctctctcaaatgat
gccaaacctaagctgatgactccagatgcattcatgacaccaagtgcatctctccaacag
attgctgtgtctccaggcagcagcgtcagctccctgactgcggtcacagccatgagtagc
acttctgtcacagatgcctctatgcccaggccatcagaagacttgactgtgagtcccaag
atgcagctggacaccagcctcacgctgagtagcagcagcagcagtctccagactagtcct
aggagccactcagttcttatcccaggcctccctgacaagctagcaccaaaggcacctgtt
ccagtcgcaccaggaaactcctctctagcactggaactgcaggaagtggaacctttggtg
gtgcctcaggcttctcccacccgtgagcgctcgccagacgtcatttcctctgcttccaca
gccatgtccaaagacatcccggagattgcttccgagaccttgcaacgcagctttgcagca
gctccgtctgggctccctgcggaggtgctggagcccaatcatcacgcagacagtatggca
tccgctgcctcggccttgcatttgctgtctccgaggaaccggcacaattcagagcacagc
caccactctttggacatgcctccagtggaggtggacagactgaatgctccatcattactg
gagactgctttaactcaggaaaatgcatcttctgacagtgttgtgagtcagccatggcca
gcagctcctgacataaccagagaaaccaggaacagcatggcagacagcccaagggatgag
gttgaagagaagcacaagagctcttcctatcatcgacacagctaccacctgctgcagcac
gacagccaggatgctagtgctgaacaaagtgaccatgatgatgaagttgcgagcttggca
tctacatcaggtggatttggtgccaaagcgtctacgcagaggctacctgtgaaggactgg
aaaaccaaggtgtcccctcgggcttccccaaagctgaagcggaagggcaagaaagatgac
ggggacgtgaaccagtcgccaagatcatctaacaaccagatgacaccagagttccaggat
gagctgatgtgcatattgaggagccaacagcgggagctctccgagctgcgtcagaaccag
atggagctgctgcagagactcacggatcacctggatgccatccagagctccctgatgggc
cacgtggagagggtgatcgactcccagcaggagcaagagcagaggaggctagaccgagca
ctgacggaagggcagcagcgcaatgggcagctccaggagcatctgtctcagcagctctct
cagtccctttccactgctgtctgtaaccgcctggagaggaccgttcgcgaggagatgaag
aagaccgtaccccagtgcatttccaagagcatggaccctgtcgctggccagctaagtaac
actattactgccaagctcactgctgttgaggggacactgaaagagagtatcaccaagcta
gtgaaatcaaagaaccttacagatagtgttgtgagagcaacggccgataccctgcagggg
ccgatccagtcagcttacannnnnnnnnnngagaagagctgccagtccatgttccagcaa
atcaatgacaccttcaagcagggcacacaggaatatatccagcagcttgagaatcacttg
aagaacaagaaggtacgggaacaggaggcccgggacccgctgctgaatcagcttcgacag
ctcatcagcaccttccagagcaccaccgagcagctggcttccaccatcgcagccagcgtc
catgctgaggtgcagcaccagctgcatattatcgtgggcaacttgcaggagtctattttg
gcccaggtgcagagagtcattaaaggagaagtgagcctggccatgaaggagcagcaagca
gctgtcacctcgagcatcgtccaggcaatgcgctctgcagccgggactccaatcccctcc
actcacttggatttccagtcacagcaaactcacatccttcagctgctccagcagggacac
ctcaaccaagctttccagcaggctctaacagcagctgatctcaacctggtgctgtatgtc
tgcgagaccgtggatacccagcaagtatttgggcagcatccgtgcccgctgtcccagcct
gtgctgctctctctcattcagcagctctcctcggatctgggtactcgtacagaactgaag
ttgaattacttggaggaagcagtgatgcacctggaccacagtgaccccatcacccgagac
cacatggggtcagtcatgaaccaggtgcggcagaagctcttccagttcctccaggtggaa
ccccacaacacgctgagcaagcctgcccgtcgcctcatgatcatgctccagggcctggtc
acccccggcatgtcctag
DBGET
integrated database retrieval system
