Columba livia (rock pigeon): 102087047
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Entry
102087047 CDS
T02912
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X3
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102087047 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102087047 (PNLDC1)
Enzymes [BR:
clv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102087047 (PNLDC1)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102087047 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
102087047
NCBI-ProteinID:
XP_005507751
UniProt:
A0A2I0MU41
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MHASYFRFFCVCVLSIPTAFDMEFTGLHSSCPENNEPSLFDSPMERYLKARQSVQRFTVT
QLGLAIFSNENSNKYVVHSYNFYLFPATLGVMDVEFTLSASSIQFLSHYGFDYNKFLKDG
IPYMNEEQEKIFSQHLLAGSWKVSSDLDRDVLKKAIDEVTCWIAAAEEDDTMVLHDLSGY
QMFEVQLVLRQALQNVWTQPLGDKKVIVKKVSFQHRQLLENSPHDCCQKELILLSARGFT
NLFQTLVKAKKPLVGHNMLMDLMHLHDKFYKPLPESYEEFKRNIHILFPVLIDTKTITKS
IWKKYPFPRVSNLLEVYEVLCSRNLNPTDPASPVITLASDCSRYAEKKSPHEAGYDAFLC
GSVLLKSAHLLLCRSTDDAVEADPSFSQYLTVLAEYLNKVNFIRGSVSSINFSGEDASCQ
HLPLLVVHVQGWPGLNERQIYQEFNAFCCFDVRRLSKNQFLLLSNKFKDIRHVLRDYKDH
PHLRVSVYRHWKHSPSVNCLLQVSGIVVLWSVLAFVLGGAPCS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcttcatatttcagatttttttgtgtgtgtgttctttccatcccaacagccttt
gatatggagtttactggcttgcattcaagttgcccagaaaataacgagcccagcctgttt
gattcccccatggagcggtacctgaaggccaggcagagcgttcagcgcttcacagttact
cagctcgggctggcaatattctcaaatgaaaattcaaacaagtatgtggtgcattcatac
aacttctatctctttcctgcaacattgggagttatggatgttgaatttaccctctctgca
tctagcattcagttcctgtctcattatggctttgactataataagttcctcaaagatgga
atcccatacatgaatgaggagcaggagaagatctttagccagcatctcttagcaggtagc
tggaaagtcagcagtgacctagacagggatgtgctgaagaaggctattgatgaagtgacc
tgttggatagctgcagcagaggaagatgacactatggttctgcatgatctgagtggctat
cagatgtttgaagttcagctggttttgagacaggctctccaaaatgtttggacacagcct
cttggagacaagaaggtaatagtgaaaaaagtgagtttccagcatcgccagcttctggag
aactctcctcatgactgctgccagaaggagctcattctcctgtctgcccggggcttcacc
aacctcttccagacacttgttaaagccaagaagcccctggtgggacacaacatgcttatg
gaccttatgcatcttcacgacaagttctacaagccccttccagaaagctatgaagagttt
aaaaggaatattcacattctgtttcctgtcctcatagacaccaagactataacaaaatct
atctggaagaaatatccgtttcctcgagtatctaatcttttggaggtgtatgaggtgctg
tgcagcagaaacctaaatccaacagatccagcatccccagtgatcactcttgcaagtgac
tgctcaagatatgctgagaagaaatctcctcacgaggcaggctatgatgcatttctctgt
ggttcagttcttctgaagtcagctcatttgctactatgcagatccacagatgatgcagtg
gaggctgatccttctttctctcagtatctcaccgtgttagctgagtatctgaacaaagtg
aatttcatccgaggaagtgtttcaagcattaatttttctggagaagatgcttcgtgccaa
catctccctcttctggttgtccatgtccaaggctggccagggctgaatgaaaggcagatc
taccaagagtttaatgctttttgttgctttgatgtcagacggctttcaaagaaccagttc
cttctgctctccaataaatttaaggacatcaggcatgttctgagagattataaggaccac
cctcacctgcgggtttccgtctatcgccactggaagcactctccgagcgtgaactgcctg
ctgcaagtctctggcattgtggtgctgtggtctgtcttggcctttgtactcggaggagct
ccttgctcttag
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