Columba livia (rock pigeon): 102087330
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Entry
102087330 CDS
T02912
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102087330 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102087330 (DDX3X)
03041 Spliceosome [BR:
clv03041
]
102087330 (DDX3X)
03036 Chromosome and associated proteins [BR:
clv03036
]
102087330 (DDX3X)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102087330 (DDX3X)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102087330 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
102087330 (DDX3X)
Spliceosome [BR:
clv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102087330 (DDX3X)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102087330 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102087330
NCBI-ProteinID:
XP_021142216
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MLLDYYSFTVACKKNPVAQEWRPDIFAVFRYEERGRGGDYDRSGFGRFDRGGNSRWSDKS
DEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEII
MGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAL
RAMRENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIR
DLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMP
PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFL
LDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK
SPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNMN
ITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSGSGS
SSFSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctgctagattattatagctttactgttgcgtgtaaaaagaatcctgttgcccaggag
tggcggcctgatatttttgctgtatttagatatgaagagcgtggaagaggtggcgactat
gataggagtggctttggtagatttgaccgtggtgggaatagccgctggtctgacaaatca
gatgaagatgactggtcaaagcctcttcccccaagtgaacgcctggaacaggagctcttt
tcaggaagcaatactggcattaactttgagaaatatgatgacattcctgttgaagcaaca
ggcagcaactgtcctccacatattgaaagtttcagtgatgttgacatgggagaaattatt
atgggaaacattgagctcacacgttacacccgtcctactccagtccagaagcatgcaata
cctattattaaagaaaagagagacttgatggcctgtgctcagacagggtctgggaaaacg
gctgcgtttcttctgccaatactgagccagatctacgcagatggccctggtgatgcattg
agagctatgagggagaacggaaggtatgggcgccgtaagcaatacccaatctcactggtc
ttggctcccaccagagaactggctgtgcagatctatgaggaagccagaaagttcgcatac
cgttccagagttcgtccctgtgttgtgtatggtggtgcagatattggtcagcagattcgt
gacttggaacgtggatgtcacttgcttgtagcaactccaggacggctggttgatatgatg
gagaggggaaagattggactggatttctgcaagtacctggtgcttgatgaagctgacaga
atgcttgatatggggtttgaacctcaaattcgtcgcattgttgaacaagatactatgcca
ccaaagggggttcgtcataccatgatgttcagtgctactttccccaaggaaatccagatg
cttgctcgtgacttccttgatgaatatatctttctggctgttggcagagtaggttctact
tctgagaatatcacacagaaagtagtatgggtggaagagttagacaaacgatcatttctg
cttgacctgctaaatgccacaggcaaggattctttgactctggtgttcgtggaaactaaa
aagggtgcagatgctcttgaggacttcctgtaccatgaaggatatgcctgtacaagtata
catggagatcgctctcaaagagacagagaagaagcgctgcaccaattccgctcgggcaag
agcccaattcttgttgccacagcagtagcagcaagaggactggatatctcaaatgtaaag
catgtcataaacttcgacttgccaagtgatattgaagagtatgtacaccgtattggtcgt
acaggccgtgtaggaaaccttggtcttgccacttcattcttcaatgagagaaacatgaac
attaccaaggacttgcttgatcttcttgttgaggctaagcaagaagtaccatcttggctg
gaaaacatggcttacgaacagcatcacaaaggaggtggcagccgtgggaggtctaagagc
agtagattcagtggaggatttggtgccagagattaccgaacaagtagtggttctggcagc
agtagctttagtagcagtcgatcaaccagcagccgcagtggaggaagtggcagcagagga
tttggaggtggtggttatggaggcttctacaacagtgatggctatggaggaaactataac
tcccagggggttgactggtggggcaactga
DBGET
integrated database retrieval system
