KEGG   Columba livia (rock pigeon): 102087583
Entry
102087583         CDS       T02912                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03030  DNA replication
clv03410  Base excision repair
clv03420  Nucleotide excision repair
clv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102087583 (RFC4)
   03410 Base excision repair
    102087583 (RFC4)
   03420 Nucleotide excision repair
    102087583 (RFC4)
   03430 Mismatch repair
    102087583 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clv03032]
    102087583 (RFC4)
   03036 Chromosome and associated proteins [BR:clv03036]
    102087583 (RFC4)
   03400 DNA repair and recombination proteins [BR:clv03400]
    102087583 (RFC4)
DNA replication proteins [BR:clv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102087583 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102087583 (RFC4)
Chromosome and associated proteins [BR:clv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102087583 (RFC4)
DNA repair and recombination proteins [BR:clv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102087583 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102087583 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_assoc_2 Rad17 AAA_16 AAA_30 AAA_22 AAA_11 DUF815 Mg_chelatase SLFN-g3_helicase AAA_14 AAA_24 AAA_28 RuvB_N TIP49_C AAA_19 AAA_5 DNAX_ATPase_lid ResIII AAA_7
Other DBs
NCBI-GeneID: 102087583
NCBI-ProteinID: XP_005506649
UniProt: A0A2I0MBH7
LinkDB
Position
Unknown
AA seq 362 aa
MQAFLKGPSSISTRPPAAKEKGAAGSSGEGKRLKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVAEKEHVKISSEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIVTEIAGVIPKETIDELLSVCQSGSFEKLETLAKNLINEGYA
VAQLVNQLHDAVVESEAYRDKEKSAIVEKLAEVDKCLVDGADEYLQLMSLCALVMQQLTQ
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaaaggcccgtcttccatcagcaccaggccccccgccgccaaggag
aagggcgcagccgggagcagcggggagggcaagaggctcaaacccatcccctgggtggag
aaatatcgccccaaaaatgtggatgaagtcgccttccaggatgaagttgttgctgtgctg
aaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggcccacctgggact
ggaaagacttccactattttggcagctgctagagaactctttgggcctgaattattccgg
caaagagtccttgagttaaatgcttctgatgagcgtggaatacaagtgattcgggaaaaa
gtgaaggcttttgctcagctgactgcgtctggaagccgttcagatggtaaagtttgtcct
ccttttaaaattgtaattctggatgaagcagactcaatgacttcagcagcccaggcagcc
ttgagacgcacaatggaaaaggaatctaaaacaacacggttttgccttatttgtaactac
atcagcagaataattgaacctttaacatcgcgatgctccaaattccgcttcaagcctttg
tcagacaaaatccaacagcagagattattggatgtcgctgaaaaggagcacgtgaaaatc
agtagtgaggcagtatcttaccttgttaaagtgtcagaaggggacttaagaaaagcaatt
acttttcttcaaagtgccactcgcctcatgggcgggaaggagatcacagagaagatagtc
actgaaattgctggggtcatccctaaagagacaattgacgaactgctgtctgtctgccag
agtggttcatttgagaaactggaaacgctggcaaagaatctcatcaatgaagggtatgct
gttgctcagctggtaaaccagctgcacgatgctgttgttgagagcgaagcttacagagac
aaagagaaatctgccatagttgagaaactcgcggaagtagacaaatgcttggtggatgga
gctgatgaatacttgcagctgatgagtctctgtgccctggtgatgcagcagctgacacag
aacacttaa

DBGET integrated database retrieval system