Columba livia (rock pigeon): 102087819
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Entry
102087819 CDS
T02912
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102087819 (SOX30)
Transcription factors [BR:
clv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102087819 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102087819
NCBI-ProteinID:
XP_005503678
UniProt:
A0A2I0LWM5
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All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MPPTGTSAWPERKRKRPLRARQQALLGDQADLSMVSAGGRSVARDARPGPGAGPPPAVSM
ATALCGGRRACCALIGGRRGARGGGGRWPGLLRGQRRVGSPSPWWGKEGSRVVTKRERDH
ERGSGENQSEVKVLENRGDGKEPWRAAAAKAEPLPAAFEVKLEKDDGPAGSPCGPVQPSP
TDHKAQLCQSFGILPEDVKLPVVFRPLPPGTRIQIQGPLPPDLIHVTKVPVNQVPLKTQS
LLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALAKANP
AANNAEISVQLGLEWSKLTEEQKQPYYDEAQKIKQRHREEFPGWVYQPRQGKRKRFPLPV
SAVFAGAPQSLITTNPAGICPFQPPAYSVVIPNVKNSIGHPVCEASPAIRLPASSIQHAG
PITLFQTTSASTAPVAVPAPTLPLRPVISPQHFAEPAQTEALDVSSGLSCSPKRPTPVFI
ESFSRNPSNVTNTNGRFSVSSSEPPKEYPGVSVFPRAVPLPQATPFLHSHLCESFPISQP
PSLFGVPPRFSFYHPYFVPGPHYFPSSTCPFSRPPFGCGNFSSSVPECLGFYEDRYQRAE
VMFSALDGDYPFKEYPEGSVREEPRSCESLDVVSCHNSGSEEQYLSPLPQLDVGALEEVL
SATPSSPSSVHLINVTDSDEEDEVKLLQEL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaccggcacctcagcatggccagagcggaagcggaagcgccctctgagagcg
cggcaacaagcccttctgggcgaccaggcggacctctccatggtttcagcgggtgggcgg
agcgtggcgagggacgcacggccgggcccgggggcggggcctccgccagcggtctccatg
gcgaccgcactgtgtggcgggaggagggcttgctgcgcgctcattggtgggcgtcgagga
gcccgaggcggaggagggagatggcccggcctgctgcggggacagcggagggtcggctcc
ccgtctccatggtggggcaaagaggggagccgcgttgtcaccaagagagaaagggaccac
gaaaggggcagtggtgaaaaccagagtgaggtgaaggtgctggagaacaggggcgatggg
aaggagccctggagagcagctgctgccaaagcggagccgcttcccgcggccttcgaggtg
aagttggagaaggacgatggcccggccggctccccatgcggccccgttcagcccagcccc
actgaccacaaggcacagctgtgccagagcttcgggatcctccctgaagatgtgaagctc
ccggtcgtgtttcgccccttgcctcctggaacccgcattcagatccaagggcctctgccg
ccggacctcatccatgtgaccaaagtgccggtgaatcaagtgccgcttaaaacgcagtct
ttgctggagccttccgtaaagattgaaactaaaaacgttcccctcacagtactgccctct
gactcaggtatgccagatactccatttagcaaggacaaaagtggccatgtaaagcgtccg
atgaacgcgtttatggtgtgggcaaggattcatcggcctgccctagcaaaagccaaccca
gctgccaataatgcagaaatcagtgttcagcttggactggagtggagcaaactgactgaa
gagcagaagcagccctattatgatgaagctcagaaaataaaacaaaggcacagagaggaa
tttcctggttgggtttatcaaccacgacagggcaaaaggaagcgttttccactgcctgtc
tctgctgtgtttgccggcgctcctcagagcctcatcaccacaaatccagctggcatttgt
cccttccagccgcctgcttactctgttgtcatccccaatgttaagaacagtattggacat
ccagtctgtgaagcttctcccgcgatccgtctgccggcttcttccatccaacatgctggt
ccaattactcttttccagactactagtgcaagcaccgcaccagtggctgttccagctccc
accctgcccctgcgtcctgtcatttcaccacagcactttgctgaacctgctcagacagaa
gctcttgatgtatcatctgggctcagttgctctcctaagagacctaccccagttttcatc
gagagcttcagcagaaacccaagtaacgtaaccaacaccaatggcagattttctgtctct
agtagcgagcccccaaaggagtacccaggggtttctgttttccctagagctgtgcctcta
ccccaggctactccttttcttcactcacatctttgtgagtcttttcccatcagtcagcca
cccagtctgtttggagtgcctcctcgcttttcattttaccacccttactttgtacctgga
ccgcactatttcccctcaagcacatgccccttcagccgacctccatttggctgtgggaat
ttctccagctcagtgcctgaatgccttggcttttatgaagacaggtaccaaagagcagag
gtgatgttttcggctctggatggagactatcctttcaaggaatacccagaaggaagcgtc
cgtgaggagccccgcagctgtgagagccttgacgtggtgtcctgtcacaacagcggcagc
gaggagcagtatttaagccccctgccacagctggatgttggagcgttggaggaggttttg
tcagccaccccatcttctccttccagcgtccaccttatcaacgtaactgacagcgacgag
gaagacgaagtaaagttgttgcaagaattgtaa
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