Columba livia (rock pigeon): 102088216 Help Entry 102088216         CDS       T02912                                  Symbol SPG11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism clv  Columba livia (rock pigeon) Brite KEGG Orthology (KO) [BR:clv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:clv03400]     102088216 (SPG11) DNA repair and recombination proteins [BR:clv03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      102088216 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  102088216 NCBI-ProteinID:  XP_021154941 LinkDB All DBs Position Unknown AA seq 2227 aa AA seqDB search MAGAKRELRVLLAALSGEARGSLRDAALVRLSRGQDALGSLLVPGGIYLEPLVPSGGGRA RGSVLPGDWADFMWEKSEDDLQAAKTKILALNKSHELFVYEITVEDGKYNPISLHSCKED TLKKLLELKNISLSSVFSLRILSFRNNKCRLLLNKFVVVHLTFPGQDSPLETCDCFTLDL RPRVLDRITDTHFCRGILFLLDSSGWIYVFDSFDGANLANINVVLWQAGDRSPAVTSPLA AVTVSQDLGVAVVTSSSSCAIAVDLNMYFRQFPGHLLCKKDPENLAVKPPEGLDEDDLAS SERSMELLARPFRTDRSWKAHLSSLRDTVRRRKPGSPGLTDDLNLPWYQFFTHLEVHDPE FYENSEKLVAFVPRVVTWAPSKRGQSYGTNLSDAGRQWKQIPVAAPQEVVKLECKLVTSV TALFVMLTNDQGLTLALWDLESQDVTHYHFGKHSVYVDCSEEVPLCLILTERGLSLVLFG LTQEEFLNRLMIYGSAGVVDSVCRLNGWEQCSIPVHALEAGLENRQLDTVDLFLKSKESL FDLAAPCPGVEQSAGGVSQSYLKNLEELRPALNLLCSAIRENDMDPHFSEQLLNLTLTFL TKQLEEIFVYTEEPDEFLQKAADILTDYIIKLRKFLRKYPQPQITIGHIERGHDEDLPAL EESHIWEKLTPEEVIAEAILSNKIPEAQIFFQIHQHPAQNFPELIQTGLNLVYDCLLKND TREASELLRNMGFDVKEEFRKICFYTVDKRVRDLLVKVLREENYFSEKEKKMIDFVHQVE SFYSESFQENKEIQSLSSWKSWGKEQDFSRHAAVLDSLLNCSRHRVQHRRVRMVFDWAQS WDELTQEMILLPRKPRQELKTCSPEVLWRHLTAQHDWVSICSWLEESEPNQALCGQENWP PLTPDIIDQSTLCSSYMRNDILNMLARKGIFVCSELEDFELLLQRLSYVGGVLQNPPPVP TYSAASGLDFHARFVLHCLEHNLQYLLYTYLDYYSLSPSNCPILDKKELHEAHPWFEFLV QCRGVAANPRDPKMIFQASLANAQILIPSSQAGVSSMLLEGRTLLALATTMFAPGGIDQV LQNEDTEKPLKKVDPQLLKMALAPYPKLRAALFPPCTSHGILPPDISLYHLVQSLVPFDP TKLFGWQSANTLAVSDASSDFPHFSSPELVNKYAIMERLDFLYYLHHGRPSFAFGTFLVQ QLVKSKSPRQLIQQAGNEAWILALSFFSVRSVGAACVCFLELLGLDSLRLRVDLKVANMI FSYRTRNKESQHNQIRESLVEKLTKLADGEKAAAAAVLISLEEAFWDAVEHQGIKKTSSD SRRQWSLVMQFCKLHNIGLSTSYLKECAQSNDWLQFVVQAQLYSYQPDEVISVLQDFTPV LQDHLTLALEKFPLSHPGSPGNSPAGMAKGQRAESLFQVLFQCQGNPSPWRYLLAEGLRE HVPVLSVFATCFQDANIIHCLCVWIITTVDDTTRAEATNHIESSVENHQWDLHDLSVIWK VFLRKQRSKTLLNGFQLFLKDSPLLYILEMYELCMNCKKYKEAKTKLDKFQESLTKLKTE DEPAVSELPVQWLESQALFLLELMMQQCRTEYELGKLLQLFAAADHLPLNGPYVKKLCAL SETLKDSSIPINRSILTSYSIETFQSECRSILEQLQEKGKFSLARQVAALAGLPVDNIVT QEVLRDLHHLRDLGQWHQNQTRIEFWKKCNDNFMKNSISSGAASDFFLNQANTVFESLAH KKINSIMERHLLLTLAGHWLADSVSPHELEELEKQIWVCRIAQQVLCADEGSDESRSSSH AVVNGDLSFDHLAKEFSFSKLPALNTPKYLKLEGLAFRESQQTLTSEEEESLQVLIGRLL DEGSVHEASRVCQYFHFYNRDVWLVLHCRALAAGEAELDKLHTDIQTLLVAREETPESCA AQPSRVPSASSLEDWTHITAPSPEDRVVASLKALTDECVHGRNYCRQVLCLYELAKELNC SYSDVSARDPETVLGAILSSRRPDRCSRARAFIAAQGILPETVAELVAEEILRELLASSE GKGQKQVWSPAAESQAFLQLAKLGQDHTLVGMKLLGKVPCVPRGELACITELLILAHNCF SLTCHMEGITRVLQAVRLLTDEHLAPNEEYGLVVRLLTGIGRYNEMTYIFELLHEKHYFE VLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAARTQLKLI ESQPWGE NT seq 6684 nt NT seq  +upstreamnt  +downstreamnt atggcgggagcgaagcgggagctgcgcgtcctcctggccgccctctcgggggaagcgcgg ggctccctgcgggacgcggccctggtccggctgagcaggggccaggacgctctgggcagc ctcctggtccctggtgggatctacctggagccgctggtgccgagcggaggcggcagggcc cggggcagcgtccttccgggagactgggctgacttcatgtgggagaaatctgaagatgat ctgcaagcagccaagacaaaaatactggctcttaataaaagccatgaactgtttgtctat gaaatcactgtagaagatggaaaatacaacccgatttccctgcacagttgtaaggaagac acacttaaaaagctccttgaacttaaaaacattagtctgtcttccgttttctctttgagg atactgtcttttcgaaacaacaaatgcagacttctgctcaataagttcgttgttgtgcat ctcacctttcctggacaggactcgcccttagagacgtgcgactgcttcaccctcgatttg cgaccacgagttttggacagaataacagatacacacttctgcagggggatcctgtttctc ttagatagctctggctggatttacgtatttgactcttttgatggtgcaaatctggcaaac atcaacgtagtgctctggcaggctggggacaggagcccggctgtcacatcgccactcgct gccgtgacagtgtcgcaagatctcggtgttgctgtggtcaccagctcttccagctgcgcc atcgcggtggatctaaacatgtacttcagacagttccccgggcatttgctctgtaagaaa gatcctgaaaatctggcggtgaagcctccggagggactggacgaggatgacctggccagt tctgagcggagcatggagctgttggcacggcctttccgcacagacaggtcctggaaggca catttgtcctcgctgcgtgacacagtaaggagaagaaaaccaggttctccaggcttgaca gatgacttgaatttaccttggtatcagttttttacccatcttgaagttcatgaccctgaa ttctatgaaaattcagagaagttggtggcttttgttccacgtgttgttacatgggcccct tccaaacgaggacaaagctatggtacaaacctcagcgatgcaggacggcaatggaaacaa atccccgtggcagcaccacaagaagtggtgaaactggagtgtaaactggtaaccagcgtt accgccctgtttgtcatgttaaccaatgaccagggactgactcttgctctctgggatttg gagtcgcaagatgtgacgcattaccactttggtaaacatagcgtttacgtggattgcagt gaagaggtgccgttatgtctaattctgacagagcgtggtctctccttggttctctttggc ttaactcaagaagagtttttgaatagattgatgatctatggcagcgctggcgttgtagac tctgtttgtcgtctcaatggatgggaacagtgttcaattccagtacatgcgctagaggca ggtttggaaaatcgtcaactcgacacagtagacttgtttttaaaaagcaaagaaagtctc tttgatctggctgccccctgccctggagtggagcagtctgctggtggtgtgtcccagtct tacctcaaaaatttggaagagctgagaccagctttaaacttactttgctcagcaatcaga gaaaatgatatggaccctcacttttctgagcagctgctaaacctcacattgacattcctt accaagcaacttgaagaaatttttgtgtacacagaagaacctgatgaattcctgcagaag gctgcagatattttaactgattacattattaaacttagaaaatttctgagaaaatatcct caaccacaaataaccataggacatatagagagaggtcatgatgaagacttacctgcatta gaagaaagccacatatgggaaaaactgacaccagaggaagtcattgctgaggccatctta agcaacaaaataccagaggcccagatcttcttccaaatccatcaacatcctgctcagaat tttccagaactgattcagacaggtttgaacctggtctatgactgtcttctgaagaatgat accagagaggcctcagagcttttgagaaatatgggctttgatgtgaaggaagaattccgt aaaatatgtttctacacagttgataaacgtgtacgagatttgttggtgaaagttttacga gaagaaaattatttttctgaaaaagagaagaaaatgatagactttgtgcatcaggttgaa agcttttactcggagtccttccaagaaaataaagagattcagtctctttccagttggaag agctggggaaaagagcaggacttttccagacatgcagccgtcctggactcgctgttgaat tgcagcagacatcgggttcagcaccggagggtcaggatggtgtttgactgggcccagagc tgggatgagcttacacaggaaatgattcttctccccagaaaaccacgccaagagctcaag acgtgcagtcctgaggttctttggaggcatttgacagcccagcatgattgggttagcatt tgttcatggcttgaagaatctgagcccaaccaggctttgtgtggacaagagaactggcct cctctcactccagacattattgaccagagcacattatgcagcagctatatgagaaacgat atattgaacatgctggccagaaaggggatttttgtctgttctgagttggaagattttgaa cttctgctccaaagactgtcctacgttgggggagtactgcaaaatcctccccctgttcca acatacagtgctgcaagcggtttggacttccatgctcgctttgtccttcactgtttagaa cacaatttgcagtatctgttatacacttacttagactattacagtttaagtccttcaaat tgcccaattttggataagaaggaactgcatgaagctcacccctggtttgaattcctcgtg cagtgccgaggggtggccgctaacccacgagatccgaagatgatttttcaggccagtcta gcaaacgctcagatcttgattcccagttcccaagccggtgtgagcagcatgctgctggaa ggacggacgctcctcgcacttgctactaccatgtttgcacccgggggtattgatcaggtt cttcagaatgaagacacggaaaaacctctaaagaaagttgatccgcagctcttaaaaatg gccttggctccctaccccaagctcagagctgctctctttcccccatgtacgtctcatgga attttgccacctgacatctctctttaccaccttgttcagtcattagtgccctttgatccc actaaattgtttggctggcagtcagcaaatactcttgctgtatcagatgcatcaagtgac tttcctcatttttcatcccctgaactggtgaacaaatacgctataatggagcgactggat tttttatactatctgcaccatggacgtccatcatttgcttttggtacatttttggtccag cagttagtgaagagcaaatctcccaggcagttgatccagcaggcagggaacgaggcctgg atcttagctctttctttcttcagcgtccggtcggtaggagcagcctgtgtgtgttttctg gaattgctcggccttgacagcctcagactcagagttgatcttaaagttgcaaacatgatt ttcagttacagaacgagaaataaagaatctcagcacaatcaaataagagaatctttggtt gaaaagttaacaaaattggctgatggtgaaaaagcagcagcagcagcagttcttatctcc ttagaagaagccttttgggatgcagttgagcatcaaggaataaaaaagacgtctagtgac tctagaaggcagtggtctttggtaatgcagttctgtaaactccacaatatcgggctgagt acatcttacctaaaggaatgtgcccaatccaacgactggctgcagttcgtggtgcaagcg cagctgtacagctaccagccggacgaggtcatttctgtccttcaggatttcactcctgtt ttacaagatcatttgacgctggcattggagaagttcccgctgtcacatccagggagccct ggtaacagccctgctgggatggccaagggccaacgtgcagagagtctcttccaggtcctg tttcagtgccaggggaaccccagcccctggcggtaccttctggctgaagggctgagagaa cacgtgcccgttctgagcgtctttgccacctgcttccaagatgcaaacatcattcactgt ctctgtgtttggataatcactactgtggatgacaccaccagagctgaagcaacaaaccac attgaaagctcagtggaaaatcaccaatgggaccttcatgacctatcagttatctggaaa gtctttttaagaaagcaaaggagtaaaacacttctaaatggcttccagctctttttaaag gattcccctttactgtatatactggagatgtatgaactatgtatgaactgcaaaaagtac aaggaggcaaaaaccaaactggacaagtttcaggaaagcctcacaaaacttaaaactgaa gatgaaccagcagtgtcagaattacctgtgcagtggttggaatcacaagcgttgtttctt ctcgagttgatgatgcagcagtgcaggacggaatatgaattaggaaagctcttacagctc tttgctgcagcagatcatctgccactcaacggcccttacgtgaagaaactctgtgcactg agtgagaccctgaaggattcctccatcccaattaaccgctccatcctaaccagttacagc atagagacgttccagagcgagtgcaggtccattctggagcagctgcaagagaagggaaag ttctccctggctcggcaggtcgcagcattggctggattgcccgtggacaacatagttacc caagaggttctaagagatctacatcatttaagagacctcggacagtggcatcagaaccag acaagaattgaattctggaaaaagtgtaatgacaacttcatgaaaaattcaatctccagc ggagctgcgtctgacttttttttgaatcaggcaaacacagtatttgaatctttagctcat aagaagataaacagcatcatggagagacacttgttgcttaccctggctggccactggctg gctgactcggtgtcaccgcacgaattagaggaactggagaagcagatctgggtctgtcgc atcgcacaacaagtgctatgcgcagatgaggggtcagacgagtccaggtcatcctcccat gctgtagtgaacggggatctttcctttgatcacttagctaaggaattttctttttcaaag ctgcctgctctgaacacgccaaagtacttaaaactagaaggtcttgcattcagagagtct caacagaccttgaccagtgaggaggaggaatcgctccaggttctgatcgggcgcctcctt gacgaaggcagcgtgcatgaagccagccgggtttgccagtatttccacttctacaacaga gacgtttggctggtgttgcactgcagagctctggctgccggggaggccgagctggacaaa ttacacacagatattcagactctccttgtagcaagagaagagacacctgaaagctgcgca gctcagccgagcagggtccccagtgcatcaagcttagaagactggacacacatcacggct ccatctccagaggatcgggtggtcgccagtctgaaggctctcacagatgaatgtgtccat ggcagaaactactgcagacaggttctctgtctatatgaacttgctaaggaactgaactgc tcctacagtgacgtgtcagcgcgtgaccccgagacggtgctgggagcgatcctgtcgtcc cgccggcccgaccggtgcagcagggcccgggcgttcatcgctgcgcagggaatcctgccc gagaccgtggccgagctggtggctgaggaaatcctgcgggagttactggcgtcttcagaa gggaaaggacagaagcaggtttggagccccgcagctgagagccaggcgttcctgcagctc gccaagctgggccaggaccacacgctggtcggcatgaaactgctgggcaaagttccctgt gtcccacgcggggagctggcgtgcattacagaattgctgattttggcccataactgcttt agtttgacttgccacatggaaggaatcaccagggtcctgcaagcagtgcggcttctcaca gacgagcatttggcacctaatgaagagtacgggctcgtggttcgtcttctcactggaatt ggcagatacaatgaaatgacctacatatttgaactgctgcacgagaaacactactttgaa gtgctcatgagaaagaaattagacccgagcgggacgctgaagacggctctgctggattac atcaagcgctgccgccccggggacagcgagaagcacaacatgatcgcgctctgcttcagc atgtgtcgggaaatcggggagaaccacgaggctgccgctcgcacgcagctgaaactcatc gagtcgcagccctggggtgagtga

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