Columba livia (rock pigeon): 102088399 Help Entry 102088399         CDS       T02912                                  Symbol RAD50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism clv  Columba livia (rock pigeon) Pathway clv03440   Homologous recombination clv03450   Non-homologous end-joining clv04218   Cellular senescence Brite KEGG Orthology (KO) [BR:clv00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     102088399 (RAD50)    03450 Non-homologous end-joining     102088399 (RAD50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     102088399 (RAD50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:clv03032]     102088399 (RAD50)    03400 DNA repair and recombination proteins [BR:clv03400]     102088399 (RAD50) DNA replication proteins [BR:clv03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     102088399 (RAD50) DNA repair and recombination proteins [BR:clv03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      102088399 (RAD50)     BRCA1-C complex      102088399 (RAD50)    NHEJ (non-homologous end-joining)     MRX complex      102088399 (RAD50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_15 AAA_21 SbcC_Walker_B SMC_N DUF2703 AAA_29 Motif Other DBs NCBI-GeneID:  102088399 NCBI-ProteinID:  XP_005512485 UniProt:  A0A2I0LTA5 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG TKGSSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR TKHGEKASLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF SATRYIKALDTLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKDN VKSIESQLEPLKSSLAAVEQNLVKAMRLDNDVKALESRRRQMEKDNEDLQQKMKKVFQGT DEQLRDRYQNHQRTVNEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH QEHITTRDSLIQSLAAQLELDGFERAPLNERHVASFHVLLKERQERDAEAANHLMREFAR KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQE IVKTEHELEKAERNSNVEKLELEVRTLQNEKINLDKTLRKLDQEMEQLNLHTATITQMEI LKKDKADKEEQIRKIKSRHSDELTSLLGYFPNKNQLEDWLHSKNKKINQTRDNLGKLNKR LASVEYDKSHASSELRRKEEQLSLHEAQIFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK RKELKRDEMMSLKPLRQTVVELQNTDIPGLRNKIQNANRDLVSLKGEIEEQESQLQAALS EEEGAKACLQDITLMERYQADIRDCERKIAQQEAKLLGVDLSRSVLQVSQEKQEKKHLWD TVTGKIELNQKLKQDQQTQIQQLKSAVNELKAERLQISSSMQRRRQLEEQTVELTTEVQS LCREIKEAQEQAFPLDATLEKLQQEKEDLMNKRTTSNKEAQEKISVIKEKVKDINKYVKE IENYIQQRKDDYKKQKEAELEEVKSQLAACEKQKEKISKEMETIRQDIDTQKIQERWLED NLTLRKRNEDLKEVEDNIKQLVKEMGEMKVPQMKNEQKRLEEKIESLKRNHDVALGRQRG FEEEIVRFKKELRESQFRDADEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIYQCSEIMKCSVSSLGSYVH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagattgagaaaatgagtatcctcggagtgaggagttttggtgtagaggataaa gacaaacaaattatcactttctttagtccattaactatcctggtgggaccaaatggtgca ggaaaaacgactatcatcgaatgtcttaaatatatatgcactggtgattttcctcctggc accaaagggagctcatttgttcacgatccaaaggttgccaatgagacagatgttagagct cagattcgattacagtttcgagatgtaaacggggagcttgtagctgtccagcggtccatg gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaaggtgtcattactaga acaaagcatggcgagaaggctagtctgagttccaagtgtgcagaaatcgatcgggagatg atcagcgcccttggtgtttccaaatcggtgcttaacaatgtcattttctgccaccaagaa gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt tcagcaacaaggtacattaaggccctcgacactctccgtcaggtacgactgaaacaaagc ttgaaagtaaaagagtgtcagacggaactgaaatacctaaaacagaataaagaaaaagca caggaaatccagaatcatcttagcaatagagaggctcagctggctgcttcgaaggacaat gtgaaatctattgagagtcagcttgaaccgctaaagagctctctggcagcggttgaacag aatctcgtgaaagcaatgaggttggacaatgacgtgaaagccctggagagcaggaggagg cagatggagaaagataacgaagatttgcaacagaagatgaaaaaggtttttcaaggaaca gacgaacagctcagggacaggtaccagaaccaccagagaacagtgaacgagaaggagaag agattatcggactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac agcgagaaatcggaactccttattgaacgaggtcgtcttcaactgcaagcggatcggcac caagagcacatcacaacgagggactcgttaattcagtctttggcagcacagctggaattg gatggttttgagcgagcgcccttgaatgaacggcacgtcgccagttttcacgtgttgttg aaggagagacaggagagagatgcagaagctgcaaatcatttgatgagagaatttgcacga aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa agaaccattgacctgaaatcagacattcaaaataagaagcaagttgagctgaagaatgta aaatatgaattgcagcagttggaagggttttcagacagaattctggagttggatcaggag attgtcaagacggaacatgagctggagaaagctgagaggaacagcaacgtagaaaagctt gaactagaagtacgaactctgcaaaatgagaagataaacctggacaaaactcttcggaaa ctggatcaggagatggaacagttgaatctgcataccgcaacaattacccaaatggagatc ctgaagaaagacaaagcagacaaagaagagcagattagaaaaataaaatcaagacattct gatgaactgacgtcactgttgggatactttccgaacaaaaaccagcttgaagactggctt catagtaaaaataaaaagattaatcagacaagagataatcttggtaaacttaacaaacga ctggcatcggtagaatatgacaaatctcatgccagtagtgagctcagaaggaaagaagag cagttgtcccttcacgaagcgcagattttcgatgtctgcggcagccaagatttcgacagc gatctgaacaaactccaggatgaaattgaaaaaagctcaaaacagcgagcggtgcttgcc ggagccaccgccgtttattcccagttcattactcaactgacggaggaaaaccagtcgtgt tgtccagtttgtcagcgagtttttcaaacggaggccgagctgcaggacgtcatcagtgac ctgcagtccaagctgcggctggcgccggacaaactgaagtcaaccgagtctgagcttaaa agaaaagagctaaaacgcgatgaaatgatgagtctcaaaccacttcggcaaacggtagtt gaactccaaaatacagacataccaggtttgaggaacaagatccagaatgcaaacagggat ctggtgagcctgaagggtgagatcgaagaacaggagtcgcagctgcaggcggctttgtct gaggaggaaggtgccaaggcgtgcttgcaggatataacactgatggagaggtaccaggct gatattagggattgtgaacgaaaaattgctcagcaggaggctaagttgctaggagtcgat ctaagtaggtctgttctacaagtaagtcaagaaaaacaagagaaaaagcacttgtgggat acagttactggtaaaattgagttaaatcaaaaactcaagcaggaccagcagactcagatt cagcagctcaagagtgcagtcaatgagctgaaagcagagagactccagatctccagcagc atgcagcgtcggcggcagctggaggagcaaacggtggagttaaccactgaggttcagtcc ctttgcagggagatcaaggaagcacaagaacaggcgtttcctttggatgccactttagaa aaactgcagcaggagaaggaggatctgatgaataaaaggactacaagtaataaagaagca caagagaagatcagtgtcataaaagagaaagttaaagacataaacaagtacgtgaaagaa attgaaaactatattcaacaaagaaaagacgactataaaaagcaaaaggaggctgagctt gaagaagtaaagtctcagttggctgcctgtgagaaacagaaggaaaagataagtaaagag atggaaacaattcgccaagacattgacactcaaaagatacaggagaggtggctggaggat aatctgactttgaggaagcggaatgaagacctgaaagaagttgaagacaatataaaacag cttgtgaaggagatgggagaaatgaaagtcccacaaatgaaaaatgaacaaaaacgttta gaagagaaaatagaatctctgaaaagaaaccacgatgttgcacttggccgacaacgtgga tttgaggaagagatcgttcggtttaaaaaggaacttcgagagtcacagttcagagacgca gacgaaaaatacagggagatgatgatcgttatgagaacaacagagctcgtgaacaaagac ctggacctttattacaaggctcttgataaagcaataatgacatttcacagcatgaagatg gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt gaatatatagaaatccgttctgatgcggatgagaatgtctcagcctctgacaaaagaaga agttacaattacagagtagtgatgatcaagggagatacagcactggatatgcgaggaaga tgtagtgccgggcaaaaggtgcttgcttctctcatcatccgtctcgctctagcagaaacc ttctgtctcaactgcggcatattggcgctagatgagcccaccaccaatctggatcgagaa aacatcgagtctcttgcacacgcgctggtggagataatcaaaagtcgctcgcagcagcgt aactttcagcttctggtgataactcacgacgaagattttgttgaacttctgggccgttcc gaatacgtggaaacgttctacaggataaagaagaacatttaccagtgctctgagatcatg aagtgcagtgtcagctccttaggctcatacgttcattag

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