Columba livia (rock pigeon): 102088580
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Entry
102088580 CDS
T02912
Symbol
NBEA
Name
(RefSeq) LOW QUALITY PROTEIN: neurobeachin
KO
K24183
neurobeachin
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102088580 (NBEA)
Membrane trafficking [BR:
clv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
102088580 (NBEA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Neurobeachin
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
DUF4800
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
PIGA
Motif
Other DBs
NCBI-GeneID:
102088580
NCBI-ProteinID:
XP_021156189
LinkDB
All DBs
Position
Unknown
AA seq
2845 aa
AA seq
DB search
MNFIIQDAESITCMSELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQVLLKM
STVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGENGIWPRHAVKLLSVLNQMPQRH
GPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSK
GVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVN
GQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFTEALNPAQIFAIHQ
LGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCLESSPKENPS
IFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLHDSQVETTVCATL
LAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLSHG
APLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYNTIRRVGTVLQLMHTL
KYYYWVVNPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSIL
NYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKLLASKSESIWVQALK
VLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVH
KPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSDMIKLFSNSRENRRCLL
QCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHS
KVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSSQTTGAKGGMEIREIEDLS
QSQSPESETDYPVSTDTRDLLMATKVPDDVLGSAERPGGGVHVEVHDLLVDIKAEKVEAT
EVKLDDMDLSPETLVTGENGALVEVESLLDNVYSAAVEKLQNNVHGSVGIIKKNEEKDNG
PLITLADEKDEPSTNSTSFLFDKIPSQEEKLLPELSSNHISIPNVQETQMHLGVNDDLGL
LAHMTGSVDITCASSIIEDKEFKIHTTSDGMSSISERELASSSKGLEYAEMTATTLETES
SGNKTVPSVDGGSIISDTERSDDGKEAGKEIRKIQTTTTTQAVQGRSVTQQDRDLRVDLG
FRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSV
MDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSAATSPTGSKTELENIEVTQGM
SAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLEC
RQRQRERVNKTSLIGSKTQDALQSVTASAATKTPLENVPGNLSPIKDPDRLLQDVDINRL
RAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEPQRETARSGSQAGRNIRQEINS
PTSTVVVIPSIPHPSLNHGFLAKLIPEQSFAHSFYKETPTVFPENIKDKETPTPVEDIQL
ESSIPHTDSGIGDEQMPNILNGTDLETSTGPDAMSELLSTLSSEVKKSQESLTESPSEIL
KPASSISSISQSKGINVKEILKSLVAAPVEIAECGPDPIPYPDPALKREAHAILPMQFHS
FDRSVVVPVKKPPPGSLAVTTVGATTAGSGLPPGSTPNIFAATGATPKSMINTTGAVDSG
SSSSSSSSSFVNGATSKNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDF
APFLSRTLLGSHGQELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINE
GRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLIS
AAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAF
GSTHSDALLKAAVEYGTEEDVVKSKKTFRSQAVVNQNAETELMLEGDDDAVSLLQEKEID
NLAAPFLPRLFTSRGPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDQAFKKIDPK
VLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLP
RVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLN
QYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQTPPYHY
NTHYSTSTSTLAWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRNSQRDTSDVKELI
PEFYYLPEMFVNSNGYNLGIREDEVVVNDVDLPPWAKKPEDFVRINRMALESEFVSCQLH
QWIDLVFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQL
LIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAV
VTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQS
IQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGG
DCYIVSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLV
ISGAKEGPCLVHTITGDLLRALEGTENCLYPRLISVSSEGHCIIYXXXXXNGKLLAQMEI
NDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLIT
GMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8538 nt
NT seq
+upstream
nt +downstream
nt
atgaactttataatccaggacgcagagagcattacgtgcatgtcggagcttttggagcac
tgtgatgtaacatgccaagcagaaatctggagtatgttcacagcaattctgcggaaaagt
gtccgtaatttacagactagcacggaagttggtttaattgaacaggtactgctgaagatg
agtactgtcgacgacatgattgcagatcttctagttgatatgttgggggttcttgccagc
tacagcatcactgtcaaagagttgaagcttttgttcagcatgctgcgaggcgaaaatgga
atctggccaagacatgcggttaaactattatcagtccttaatcagatgccacagagacat
gggcctgatacctttttcaacttcccaggctgtagtgctgcagcaattgcattgcctcct
attgctaagtggccttatcaaaatgggtttactcttaacacctggtttcgtatggatccg
ctaaacaatatcaatgtagataaggataaaccctatctctattgtttccgcactagcaaa
ggtgttgggtattctgctcattttgttggcaactgcttaatagttacatcgttgaagtca
aaaggcaaaggtttccagcactgtgtgaagtatgactttcagccacgcaagtggtacatg
ataagcatagtacacatctataaccgatggagaaacagtgaaatacgatgctacgtgaat
ggtcagctggtatcctatggtgacatggcctggcatgttaacacgaatgatagctacgac
aaatgttttcttggctcttcggagactgctgatgctaatagagtgttctgtggccagctt
ggagcagtatatgtattcactgaagcgctcaacccagcacagatttttgcaatacatcag
ttaggacctggctataagagcacattcaaatttaaatctgagagtgacattcatctggct
gaacaccacaaacaagtgctatatgatgggaaacttgcaagtagcattgcttttacttac
aatgcgaaagctactgatgctcagctatgccttgaatcctcaccaaaggaaaatccttca
atttttgtacactccccccatgctcttatgcttcaggatgtgaaagctattgtaacacac
tccattcacagtgccattcattccattggaggaattcaggttctctttcctctcttcgcc
cagttagacaatcgacagctgcacgacagtcaggtggaaacaacagtttgtgctaccctg
ttggcttttttggttgagcttcttaagagttcagtagccatgcaagaacaaatgcttggt
ggaaaaggcttcctagtcattggctacctccttgaaaagtcatctagagttcatataacc
agagcagttctggaacaatttttgtcgtttgctaaatatttggatggattgtctcatgga
gcaccactgctgaagcaattatgtgaccacatcctgtttaatcctgctatctggatacac
acccctgcaaaggtgcaactttctttgtatacctacttgtcagctgaattcattggaact
gctacgatctataacaccatacgcagagtgggaacagtactgcagttaatgcacacactg
aaatactactactgggtggttaatcctgctgatagcagtggcattactcctaaaggatta
gatggtcctcggccctcacagaaagaaatcatatcactaagggcatttatgcttctgttt
ttgaaacaacttatattgaaggatcgaggagtgaaagaagatgaactacagagcatatta
aattacttattaacaatgcatgaggatgaaaatattcatgatgtactgcagctgctagtg
gcactgatgtccgaacatccagcatccatgatacctgcctttgatcagagaaatgggata
cgagtaatttataagttattggcttccaaaagtgagagtatatgggtgcaagctttgaag
gtgcttggatattttcttaaacacttgggtcataagcgaaaggtggaaataatgcatact
cacagtcttttcacgcttctcggagaacggttgatgctgcatacaaatacagtgacagtt
acaacctataacactctttatgagattttgacagaacaagtgtgcactcaagttgttcat
aaaccacacccggagccagattcgacagtgaaaattcagaatccaatgattcttaaggtg
gtggcaacactgttaaaaaactccacgccaagtgcagagctgatggaagttcgacgtttg
ttcttatctgacatgataaagctctttagtaatagccgtgaaaacagaagatgtttactt
cagtgttcagtgtggcaggactggatgttttctctgggatacattaacccaaagaactct
gaagagcagaagatcacagagatggtttacaacattttccgtattctcttgtatcatgca
ataaaatatgaatggggaggctggagagtgtgggtggatactctttctatagctcattcc
aaggtcacatatgaggcacacaaggagtatctagcaaaaatgtatgaagagtatcaaagg
caagaggaagaaaatattaaaaaggggaagaaggggaatgtgagcactatctcaggtctt
tcctctcagacaacaggagcaaaaggtggaatggaaattcgagagatagaagacctttca
caaagtcaaagtccagaaagtgaaacggattaccctgtcagtacagatacaagagacttg
ctcatggctacaaaggtgccagatgatgtgcttggaagtgctgagagaccaggaggagga
gtgcatgtggaagttcacgaccttttagttgacataaaagctgaaaaggtagaagctact
gaagtaaagcttgatgatatggatttatcaccagagacactggtaactggagaaaatggt
gcacttgtagaagttgaatctcttctagataatgtgtatagtgctgctgttgagaagctc
caaaacaatgttcatggaagcgtgggtattattaagaagaatgaggaaaaagataatggt
ccgttaataactctggctgatgagaaagatgaaccttctactaacagtacctcatttctc
tttgataaaatacctagtcaagaggagaaacttctgcctgaactttcaagtaatcacatt
tctattccaaatgtgcaagaaacgcagatgcatcttggtgtaaacgatgatttgggattg
cttgcacatatgacgggtagtgtagatataacatgtgcttcaagtataatagaggacaag
gagttcaagattcacacaacttcagatggaatgagtagcatttctgagagagaattggct
tcatcatctaaaggattagaatatgctgaaatgactgcaacaactcttgaaacagagtct
tctggtaacaaaactgtacctagtgttgatggaggaagtataatatcagatacagaaaga
tctgatgatggtaaggaagcaggaaaggagatacgaaagatccagacaactaccacaacc
caggcagtacagggtcgatctgtcacccagcaagacagggatttacgtgttgacttggga
tttcgaggaatgccaatgacggaagagcagcgacgacagtttagtccaggtccacgcaca
actatgtttcgtattccagagtttaaatggtcacccatgcaccagcggctcttgacagac
ttgctttttgcactagaaacagatgtacatgtttggagaagtcactccacgaagtcagtg
atggactttgtcaatagtaatgaaaatattatttttgtacacaacacaatacacctcatt
tcccagatggtagacaatatcattattgcttgtggaggaattttaccgctgttgtcagca
gccacatccccaactggttctaagactgaattggaaaatattgaagtaacacaaggaatg
tcagcagagacagcagtaacttttctcagccgtctgatggcaatggttgatgtactagta
tttgccagttctctaaattttagtgagattgaagctgaaaaaaacatgtcttctggaggt
ctaatgcgacaatgcctaaggcttgtttgctgtgtggctgtgagaaactgcttagaatgt
cggcaaaggcagagagagagagtgaataagacatcattaatcggcagtaaaactcaagat
gctcttcagagtgtaactgcatcagcagcaaccaagactccccttgaaaatgtccctggc
aatctttctcctataaaagaccctgacaggcttctgcaggatgttgatattaatcgtcta
cgagcagttgtttttcgtgatgtggatgacagcaaacaagctcagttcttagctttggca
gtagtctactttatttctgttttgatggtctccaaataccgcgatatactagaaccacaa
cgagaaactgcaagatctgggagccaggcaggtagaaatatcagacaagagataaattca
ccaacgagtacagttgtggtcataccatctatccctcacccaagtttgaaccatggattc
cttgccaagttaattcctgagcagagctttgcccactcattttacaaagagacaccaact
gtatttccagaaaatatcaaagataaagaaacaccgacaccagttgaagatattcagctg
gaaagctctattcctcatacagattctggaattggagatgaacagatgcccaatattttg
aatgggacagacttggagaccagcacaggccccgatgctatgagtgaactgttgtctact
ttgtcttcggaagtgaagaaatctcaggagagcttaacagaaagccccagtgagatcttg
aaacccgcatcatcgatatccagcatcagccaaagtaaaggcatcaatgtcaaggaaata
ctgaaaagtcttgtggcagcccctgttgaaattgcagaatgtggtccggatccaatccct
tacccagatcccgcactgaagagagaagctcatgctattcttcccatgcagtttcactcg
tttgacaggagtgtggttgtaccagtaaagaaaccccctccaggtagcctggccgtgacc
acagttggagctaccacagctgggagtggactgcccccgggtagtacacctaatatattt
gctgcaacaggagctacaccaaaaagtatgattaatacaacaggtgcggtagactcagga
tcttcttcttcctcttcgtcatccagctttgtgaatggtgctaccagcaaaaatctccca
gctgtccaaactgttgctccaatgccagaggattcagctgaaaatatgagtatcactgca
aagcttgaaagagctctagaaaaggtggcccctctcctgcgagaaatttttgttgacttt
gcccctttcttatcccgaacactgttgggcagtcatgggcaagagctgctgattgaaggt
ctggtttgtatgaagtcgagtacttcggtagttgaacttgttatgctgctttgttcacag
gaatggcaaaattctattcagaagaatgcaggacttgcatttattgagctcatcaatgaa
ggaagattattatgtcatgcaatgaaagaccatatagtgcgtgttgcaaatgaagcagag
tttattttgaaccgacaaagagctgaagatgtccacaagcatgctgagtttgagtcgcag
tgtgctcagtatgctgctgacagaagagaagaggagaagatgtgtgatcatcttatcagt
gctgctaagcatcgagatcatgttacagcaaatcagctgaaacagaagatactcaacata
ctgacaaataaacatggtgcctggggagctgtttctcacagccaactgcacgacttctgg
cgcttggattactgggaagatgatttgcgccggcggaggcgatttgttcgcaatgctttt
gggtctactcattctgatgctctcctaaaagctgccgtggaatatggcactgaagaggat
gtagtgaaatcaaagaaaactttccgaagtcaagctgtggtaaatcagaatgcagaaaca
gagcttatgctggaaggagatgatgatgctgttagcctgctccaagagaaagagattgac
aaccttgcagctccttttcttcccagactgttcacttcaagaggccccgtggtcctcagc
acgccggcacagctcatagcccccgtggtggtggccaaggggacgctctccatcaccacc
acggaaatctacttcgaggtggacgaggatgaccaggccttcaagaagatcgaccccaag
gtccttgcctatacagaaggccttcatggaaaatggatgttcagtgagattcgggctgtt
ttttcaagacgttatcttctccagaacacagctttggaagtgtttatggcaaacagaact
tctgttatgtttaattttcctgaccaagcaacggtgaaaaaagttgtctacagcttacca
cgtgttggagtaggaaccagctatggtttgccacaagccaggagaatctctctggccact
cctcgacagctttataaatcctccaacatgactcagcgctggcagagacgggagatatct
aactttgaatacttgatgttcctcaacaccatagcaggacgaacgtacaatgatctgaac
caataccctgtatttccatgggttttaacaaactatgaatctgaagagttagacctgacc
cttccaggcaacttcagagatctttcaaagcccatcggtgctttgaacccaaagagagcg
gtcttctatgcagaacggtatgagacatgggaagatgatcagactccaccttatcattac
aacacccactactctacatctacttctactttggcttggcttgttcgtattgagcccttt
acaacattctttctaaatgcaaatgatggcaaatttgaccacccagatcgaaccttctct
tcagtagcgaggtcttggaggaacagccaaagagatacctcagatgtgaaggagttaatt
ccagagttttactacctaccagagatgtttgtcaacagtaatggctataatctaggaatc
agagaagacgaagttgttgtcaatgatgtggatctccctccatgggccaagaagcctgaa
gactttgtccgcatcaacaggatggccctggaaagcgagtttgtatcatgtcaacttcat
cagtggattgaccttgtatttggctacaagcaacgaggaccagaagcagtgcgtgcactc
aatgttttccactacctaacatatgaaggctctgtgaacctggacagtatcactgatcct
gtcctcagggaggccatggaggcgcagatacagaactttggacagacgccatcgcagttg
ctcattgagccccatccacctcggagctctgccatgcacctgtgtttccttccacagagc
cctctcatgtttaaagatcagatgcagcaggatgtcatcatggtgctgaagttcccatca
aattcccctgtcacacacgtggcagccaacacgctgccccacctgaccattcctgccgtg
gtcactgtcacctgcagcaggctgtttgcagtcaatcggtggcacaacacagtaggcctt
cggggagccccaggttattctttggatcaagcccatcaccttccaatcgaaatggatcca
ttgattgccaataactctggtgtgaacaaacggcagatcacagaccttgtggatcagagc
atccagatcaatgcacactgcttcgtggtcacagcagataatcgctacattcttatctgt
ggtttctgggacaagagctttcgagtttattctacagaaacaggaaaattaactcagatt
gtgtttggccactgggatgtcgtgacttgccttgccagatcagagtcctatattggtggt
gattgctacattgtgtctgggtctcgtgatgctacattgctgctttggtactggagtggc
cgacatcatattataggggacaacccaaatagcagtgattatccagctcctcgagctgtt
ctaactggtcatgaccatgaagttgtctgcgtgtcggtctgtgcagagctgggactcgtt
atcagcggtgctaaagaaggtccctgtctggtacacacaattactggagatttgctgaga
gccctggaaggaacagaaaactgcttgtatcctcgtttaatttcagtatctagtgaaggt
cactgcatcatctacnnnnnnnnnnnnnntaatggcaaactcttagctcagatggagatc
aatgattcaaccagggctatcctcctgagcagtgacgggcagaacctggtgacaggggga
gacaatggcgtagtagaagtgtggcaggcctgtgacttcaagcagctctacatttaccct
ggctgtgatgctggcataagagctatggatctgtctcatgatcagagaactctgattact
ggcatggcttctggcagcatcgtagcttttaatatagattttaaccggtggcattatgaa
catcagaacagatactga
DBGET
integrated database retrieval system
