Columba livia (rock pigeon): 102088999
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Entry
102088999 CDS
T02912
Symbol
NUP98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03013
Nucleocytoplasmic transport
clv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102088999 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102088999 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102088999 (NUP98)
03036 Chromosome and associated proteins [BR:
clv03036
]
102088999 (NUP98)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102088999 (NUP98)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102088999 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102088999
NCBI-ProteinID:
XP_021150066
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTSFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
SINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFVNTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGSGLGTG
FGTALGAGQTSLFGNTQTKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNSSNLFSPVSR
DNEDLASPSEYPENGDRFFLSVPPDENHRADGEREEEEDHHEVTRFYTNPIAKPIPQTPE
NAAHKHQSSVDDTIVALNMRAALRNGLEGSSEDASFHDDSLQDEREEEPEPPHHPHPAGI
VLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDERKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLES
VSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLKVDAKKLKTAPAAPPGL
APPQQMALDGKPTPPAQSPEVEQLGRVVELDSDMADVTQEPPREAPAEDGAAEEPDAVPA
STHIASSLGVNPHVLQIMKASLLADDDDLDLILDPYPVKPPVKTDTSQEICSPRLPISKP
QGQKRYSAGGLLQSKFANLILQPPSAAAQDPKGARTTSSPASVPLWPATSPLAPAFPVRP
ALPEVPMRTVGVRRRQALVPRDRSIAHGKGKLLMDMALFMGRSFRVGWGPNWTLVNSGDQ
LSSSSEMEDPQCEPVEYEFLPTPVAPKSLSESCFKVHVEKLSVEQRPADREQQLYLIPLE
IKLQHSTVHMDQRCPLLAPNPGVAAIHDYAHWVRKAAQDPALAETVVKHWLLTWTLCEAI
WGNLKELEASLEEPSEYVLALERRRAFSRWLADTAARRVDEEVSLARHGSPIEAVFSCLT
GRRIGEACRLAQLAGDHRLALLLSQLAGSQPLRDLLTMQLVDWHRLQADCFIQEDRLRVF
TLLAGKPVWQLSERTSINVCSLLDWKRCVAVHLWYLLPPTASISKALAMYESAFQNTLEC
EKYACCPLPPYLEDSGCVFEDDDNGGRPLRDVCFHLLKLYSDRHYDLEQLLDPRSVTCDP
LDYRLSWHLWEVLRALNYTHLGRQGQGVLNASYAAQLESRGLWEWAVFVLLHEPDAHTRE
KSVRELLHRHCQLAETPESWAKETFLTQRLCVPPEWIHQAKAVRARVEGDRHKEALFLFK
AGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWDTAGLVYLDYIRV
IEMLDRIQQLDCSPYELERLHTKVMSLCNRIEQIQCHSAKDRLAQSDMATPASPDPQRVP
LRLLAPHVGRLPMPEDYALEELRGLTQSYLRELAVTH
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggcactccgtttggaggcagcaccggctttgggacaacctcg
actttcggacaaaatgctggctttggcacgacgagcggaggagcgttcgggacctcggcc
ttcgggtcgaacaacaacaccggaggcctcttcgggagcacgcagacgaaaccgggagga
ttgtttggttcgaccacgttcaaccagccagccacctcctccaccagcaccagctttggg
tttggcacgtccaccggcacgtccagcagcctgtttggcaccaccagcacgggcggcggg
ctcttctcgtcccagagcaacgccttcgcgcagaacaagccggccggctttgggaacttt
ggcaccagtaccagcagcggaggtctctttggaaccaccaacacgacttccaatcctttc
gggagcacgtcgggctcgctcttcggcccaaccagttttaccgctgctccaactggcacc
actatcaagtttaacccgccaactggtaccgatacgatggtgaaatctggagtcagcacc
agcatcaacaccaagcaccagtgtatcactgccatgaaggaatacgaaagcaaatctctt
gaggagctccgtttagaagattaccaggcaaacaggaaagggccctcgaatcccgtggga
gcgggagcggccgccggcctgtttgggtcctcgactgccacgtccagcacggccacgggg
ctcttcggctcctccaccaccaacacgggcttttcctacggacagaataaaactgctttt
ggaaccagtaccactggcttcgggacaggaacgacagggggtctcttcggtcagcagtct
cagactacgagcctgttcaacaagccgtttggtcaggccacgacgacgcagaacacgggc
ttctccttcgtcaataccagcacgctggggcagcccaacaccaacaccatgggtctgttc
ggggtcacccagccctcgcagcccggaggcctgttcggaacagccgccaataccaacgcc
ggcactggattcggcaccggaaccgggctgtttggccaggccaacacaggctttggcgtt
ggcggatcgacgctgtttgggaacaaaccggctggatttggaaccaccacgaccagcgct
ccctcgtttggcaccaccacgggcggcgggctcttcggtttcggcgccaacactgctgga
aatagtttgtttggaaacaagcctgcgacggggacgctgggaagcggcctggggacgggc
tttggaacggctctgggcgcaggacagacctcgctgttcggcaacacgcagaccaagctc
ggcgggacgctgggaacgggggcgttcggggcgccgggcttcaacacctcgacggccacg
ctgggcttcggagccccccagcctgctgtggcgctgacggaccccaacgcgtcggctgcc
cagcaggccgtgctgcagcagcacctcaacagcctcacgtactcgcccttcggagactcc
ccgctcttcagaaaccccatgtcagacccaaagaagaaagaggagaggctgaagccaacg
aacccagcggctcagaaggccctgacgacacccacccactacaaactgactccgcgtcca
gcgaccagagtgcggccgaaagctctgcagtcggccggatccgctaagtctcagctcttc
gatggcctcgacgatgacgaaccgtccctggccaacggcgccttcatgccaaagaagagc
atcaagaaactggttctgaagaatctcaacagcagcaacctcttctcgcccgtcagccgt
gacaacgaggacctggcttctccctccgagtacccggagaacggcgaccggttctttctg
tcggtgcctcctgacgaaaaccacagagcagacggggagcgagaggaggaggaggatcac
cacgaagtgaccaggttctacaccaaccccatcgccaagcccatcccgcagacccccgag
aacgccgcgcacaagcaccagagcagcgtggacgacaccatcgtggctctgaacatgcga
gcggccctgcgcaacgggctggagggcagcagcgaggacgcctcgttccacgacgattcc
ctccaggacgagcgcgaggaggagcccgagcccccgcaccacccgcatcccgcagggatc
gttctgacgagagctggttattacaccatcccatccatggaggagctggctcgattcacc
aacgacagaaacgaatgtattgtgacagacttcaccatcggccgcaaaggttacggctca
atttactttgaaggagaagtaaatctgactaacttaaatctggacgagatcgttcatatc
cgtagaaaagaagttattgtttaccctgacgatgaaagaaaaccgcctgttggtgaaggt
ctgaacaggcgggccgaagtgaccttagacggagtgtggcctacggacaaaacctctcgc
tgcctgatcaagagccccgagcggctggcagagatgaactacgagggcaggctggagtct
gtctcccgcaagcagggcgctcgcttcaaggagtatcgccccgagaccggatcctgggtg
tttaaggtggcgcacttctccaagtacggcttgcaggattcggacgaggaggaggaagag
catcctttaaaagtggacgccaagaagttaaaaacagcgcccgcggctcccccggggctc
gcgccaccccagcagatggccctggacggcaaaccgacgcccccggctcagagcccggag
gtggagcagctgggccgcgtggtggaactggacagcgacatggcagacgtgacccaggag
ccgccccgcgaggcgccagcggaggacggcgcggccgaggagcccgacgccgtgcccgcg
tccacccacatcgcctccagcctcggcgtcaacccccacgtcctgcagattatgaaggcc
tctctgcttgctgacgacgatgacctggacctgatcctggatccttaccctgtgaagcca
cctgtgaaaacggacacgtcgcaggagatctgctcgccgaggctccccatctcaaaaccg
caggggcagaagagatactcagccggcgggctgctgcaatccaaattcgccaacttaatc
ctccagccgccgagcgccgctgcgcaggaccccaagggagccaggacaaccagcagcccc
gcgtccgtccccctttggccggcgacgtctccgctggcgcccgcgttcccggtgcgcccg
gcgctccccgaggtgcccatgaggacggtgggggtccgcaggcggcaggcgctggtgcct
cgggacaggtccatcgcccacggcaaagggaagctgctgatggacatggcgctcttcatg
ggccgctccttccgcgttggctggggacccaactggacgcttgtcaactctggagatcag
ttgagcagctcaagtgaaatggaagatccgcagtgtgagcctgtggaatacgagttcctg
ccgactccggtcgctccgaaatcgctctcagaatcgtgtttcaaggttcacgtggagaag
ctgagcgtggagcagcggccggcggacagagagcagcagctgtacctcatcccgctggag
atcaagctgcagcacagcacggtgcacatggaccagcgctgtcccctcctggcgcccaac
ccgggggtggccgccatccacgactacgcccactgggtgcgcaaggcggcccaggaccct
gcgctggccgaaacggttgtgaagcactggctgctgacgtggaccctctgcgaagccatc
tgggggaacctgaaggagctggaggccagtttggaggagcccagcgagtacgtcctggcg
ctggagcgcaggagagccttctcgcgctggctggcggacacggccgcccgccgtgtggac
gaggaggtgtccctggcgcgccacggcagccccatcgaggccgtgttcagctgcctgacg
gggaggaggatcggagaagcctgcaggctggcgcagctggcgggtgaccaccggctggcg
ctgctcctgtcgcagctggcgggcagccagcccctgcgcgacctgctcaccatgcagctg
gtggactggcaccggctgcaggccgactgcttcatccaggaggacaggctgcgcgtcttc
accctgctggccgggaaacccgtgtggcaattgtcagagagaacgagcatcaacgtgtgc
tcgctgctggactggaagcgctgcgttgccgtgcacctctggtacctgctgcctcccacg
gcttccatttccaaggctctggccatgtacgagtcggcgtttcagaacacgctggagtgt
gaaaagtacgcctgctgtcccctgcctccctacctggaggattccggctgtgtctttgaa
gacgatgataatggaggaaggcccctgcgagacgtctgcttccatttgttaaagctctac
agcgacaggcactacgacctggagcagctgctggacccgcgcagcgtgacgtgtgacccc
ctggactatcgcctgagctggcacctctgggaggtgctccgggcgctcaactacacccac
ctgggcaggcagggccagggcgtgctcaacgccagctacgccgcgcagcttgagagccgc
ggcctgtgggagtgggctgtgttcgtcctgctgcacgagcccgacgcgcacacgcgggag
aagtcggtgcgcgagctcctgcaccggcactgccagctcgccgagacccccgagtcctgg
gccaaggagacgttcctgacgcagcggctctgcgtcccgcccgagtggatccaccaggcc
aaggccgtccgggcgcgcgtggagggcgaccggcacaaggaagcgctgttcctgttcaag
gccgggcactggaaccagtgccacaagctggtggtccggcacttggcctcggacgcgatt
attaatgagaactacaagtacctgaaggggtttctggaggacctggcccccccggagcgc
agcgccctcatccaggactgggacacagcggggctggtctacctggattacatccgggtc
atcgagatgctcgacaggatccagcagctggattgttccccctacgagctggagcggtta
cacaccaaagtgatgtcgctgtgcaaccggatagagcagatccagtgccacagcgccaag
gaccgcctggcgcagtcagacatggccaccccggcctcgcccgacccccagcgcgtcccc
ctgcgcctgctggccccccacgtgggccgcctgcccatgcccgaggactacgcgctggag
gagctgcgcgggctcacccagtcctacctgcgcgagctggcggtcacccactga
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integrated database retrieval system
