Columba livia (rock pigeon): 102089094
Help
Entry
102089094 CDS
T02912
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clv03009
]
102089094 (DDX55)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102089094 (DDX55)
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
Pre-60S particles
Helicases
102089094 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102089094
NCBI-ProteinID:
XP_005498318
UniProt:
A0A2I0M889
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MEAVTEGSWESLPVALSPGVLRALRELGFARMTPVQSATIPLFMNNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNAQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESFIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVSDLLPKLKAMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKQLEQQRKEREENGGKKKFVKNKAWSKQKAKREKKKKITAKRKR
EEGSDIDEEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGNQSRLKAETVADLESEG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgaggggagctgggagtcgctgcccgtggcgctgagcccgggcgtg
ctgcgggcgctgcgggagctcggcttcgcccgcatgaccccggtgcagtctgcaaccatt
ccactcttcatgaataacaaagatgttgctgcagaagcggtgacaggcagtgggaaaacc
ttagcatttgtgattcccatactggaaattcttctcagacgggaagaaaaattgaagaaa
atgcaggttggagctataattatcacaccaacaagagaattagctattcaaattgatgag
gtgctatcacatttcacaaaacacttccccaggtttagtcagattcttttaattggcggt
aggaatcccatggaagatgttgaaaagtttaaagagcacggcgggaacatcattgtagct
acaccaggccgcttggaggatctgttcagaagaaaagcagatgggctggatctggcaagt
tgtgtgaagtctctggacgtgttggtgttagacgaagcagacaggcttctagatatgggc
tttgaagcaagtttaaacaccattctggacttcttgcccaagcagaggcggacaggtctg
ttctcagcgactcagactcaagaggtggagaacctggtgcgagccggtctgcgcaatccc
gtccgcatctcggtgaaggagaagggagtggcagcgagcaacgcacagaaaactcccacg
cgcctggagaactattacatgatctgcaaagcagatgaaaaatttaatcagttggtgcat
tttcttcgacagcacaaacaggaaaaacatcttgtctttttcagcacgtgtgcctgtgtg
gaatactatgggaaggctttggaatccttcattaaacaagtgaaaataatgagcattcac
gggaaaatgaaacacaagcgcaacaagatttttactgagtttcggaagctcccaggtggc
attttagtgtgcactgatgtgatggctcgtggcatagacattccagaggttcactgggtt
ttgcagtacgacccaccgagcagcgccagtgcctttgtgcaccggtgcggtcgaacagcg
cggatcggcaatgtaggcagcgcgcttgtgtttttgcttcccatggaagaatcttacgtt
aactttctctcaatcaaccaaaagtgtcccatgcaggagatgaagccccagacaaacgtg
tcagacctccttcccaaactgaaggccatggccctggctgacagggccgtgtttgagaag
gggatgaaagcatttgtgtcttatgtccaggcttatgccaaacacgaatgtaatctgatc
ttccgaataaaagatctggattttgctagccttgccaaaggcttcgcactgttaaaaatg
ccaaagatgcccgaactaagaggaaaatgttttccagactttactccggtcactgttaat
acagactccatttcatttaaggacaaaaatagagaaaaacagagacaaaagcaattagaa
caacaaagaaaagaaagagaggaaaatgggggcaaaaagaaatttgtaaagaacaaagcc
tggtcgaagcagaaagccaaaagggagaagaagaagaaaataacagctaaaaggaaacgt
gaagagggctctgatatcgacgaggaggatatggaagagctgctgaatgacacgagactc
ttgaaacgattgaaaaaagggaaaattagtgaagaagagtttgagaagagactaacaggc
aaccagagcagacttaaagcagaaactgttgctgacttagagtctgaaggttga
DBGET
integrated database retrieval system
