Columba livia (rock pigeon): 102089106
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Entry
102089106 CDS
T02912
Symbol
SCARF1
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102089106 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102089106 (SCARF1)
Membrane trafficking [BR:
clv04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102089106 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
102089106
NCBI-ProteinID:
XP_005502064
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MGSARPILCLQLWLWVQSSAQELDPDGRNVCRLPAGPACCPGWKQEGRECTAALCEGEDA
CGADEVCVRPGVCLCKPGFFGADCSSRCPEQYWGPDCKRSCTCHPNGRCDPASGRCTCDP
NHWGELCQFPCPCSPHGRCDPLTGACRCEPGWWAPTCKKQCQCNPSSSHCDPLTGHCHCL
PGWWGRRCSFKCSCNVSPCAQETGKCECKAGFWGSACQRRCDCLHGSCNPXPGYQGRSCQ
EPCPAGRYGSQCVHSCGSCRHNQPCSPLDGTCPACQPGWNGTLCKEPCAPGFHGEGCLQP
CPRCRRGDVCDPETGSCPRCEPGWTGPSCNSSCPTGTFGDGCQLLCPECVAGSCDPVSGA
CICQAGYWGASCNDTCPEGYFGVNCSSTCQCSRGTCHPVQGNCVWSFKDHGALAAAVLVP
LLLLLLCIACCCCGAGPADARDRAAVPDDDVLARMKHHVQGVLANLSAMMPCFALGSSKL
PKVTVSHHDTEIPFNPSFIESPSAAWVSDSSFSSSFDTDNEGPEYSVPPREGIPLLGGAE
LQEGASPPGEVLPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAAETPSPG
RKPKTPWGPSKLSQPPVDTAAEPPAEQPASDCYESPEPLGKGEESHRPSPRATPGGRRRV
VSSTRHVAQRVEALEAAAKSASWEAKGKEPNVTTIYMMVGTAGQDSKAEGGGEGRVQAVL
KRLGSLQRGKWAAKEEPKVRRSVEAIQKPPRRALAQRRDSANSCKQRESVPGAPAEPSTS
KQQHLPGKRQSFLLTSPLPESTEAQDGASDAVGATERGKSPELVLSLETKVQAAPKEEPK
YENVVSGSADSPPGHTEEPPATPAAT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctggaccctgacggcaggaacgtctgcaggctccccgctggcccggcgtgctgc
cctggctggaagcaggaaggacgggagtgcacggctgcgctgtgcgagggggaggatgcc
tgcggggcggacgaggtgtgcgtgagacctggggtttgcctctgcaaacccggcttcttc
ggagcagactgcagttcccgctgccctgagcagtactggggtcccgactgcaagcggagc
tgcacatgccaccccaacgggcgctgcgacccagcgagcgggcgctgcacctgcgacccc
aaccactggggagagctctgccagttcccctgcccctgcagcccccatggccgctgcgac
cccctcaccggcgcctgccgctgtgagccgggctggtgggcacctacctgcaagaagcaa
tgtcagtgcaaccccagcagctcccactgtgaccccctcaccgggcactgccactgcctg
ccgggctggtggggcaggaggtgcagcttcaaatgctcctgcaacgtctccccctgtgcc
caggagacgggcaagtgcgaatgcaaagctgggttttgggggtcggcgtgccagcggcgc
tgcgactgcctgcacggctcctgcaacccanaccctggctaccagggcaggagctgccag
gagccctgtccggcagggagatatgggtctcagtgtgtgcacagctgcgggagctgccgg
cacaaccagccctgctcgcctctggacggcacctgcccggcctgccagcccggctggaac
gggaccctctgcaaggaaccctgcgctcccggcttccatggcgagggctgtctccagcca
tgtccccgctgcaggcgtggggacgtctgtgaccccgagaccgggtcctgcccgcgctgc
gagcctggctggactggacccagctgcaacagctcctgccccacaggcacttttggggat
ggatgccagctcctctgccctgaatgtgttgcggggagctgtgaccccgtgtcaggagca
tgtatctgccaggcgggatactggggagccagctgcaacgacacctgtccagaggggtat
tttggagtgaactgttcctcgacctgccagtgctcccggggcacctgccaccctgtgcag
gggaactgtgtgtggagttttaaggaccacggggctctggcagctgccgtcctcgtccct
ctcctgctgctgctgctctgcatcgcctgctgttgctgcggagctggcccagcagatgct
agagacagggctgccgtgccggatgacgacgtgctggccaggatgaagcaccacgtgcag
ggggtgctggcgaacctcagcgctatgatgccatgttttgctctgggcagctccaagctt
cccaaagtcacagtttcccaccacgacacagaaatccccttcaaccccagcttcattgag
tcaccgtcagccgcgtgggtttcagacagctccttctcctcctccttcgacaccgacaac
gagggacccgagtactctgtccctcccagagaaggcatcccgctgctggggggggccgag
ctgcaggaaggggcatccccccctggcgaggtgctcccggacccgtccgccttcgactcc
gaggatgtctcgcagcccttcgccatccctcgcacctccagcattgccaaggccaagcgt
ccctctgtgtcctttgctgaagggacaaaatttggggcagcggagacccccagccctggg
cggaagcccaagaccccatggggcccatccaagctgtcccaaccacctgtggacacagca
gctgagccccccgctgaacagccagccagtgattgctatgagagccctgagcccctcggc
aagggggaggaaagccaccgtccatcgcctcgggccaccccagggggacgccgacgggtg
gtgtccagcaccaggcacgtggctcagagagtggaggctcttgaagcggctgcaaaatct
gccagctgggaggcaaaggggaaggagcccaacgtcaccaccatctacatgatggtggga
acagccgggcaggactccaaggcagagggaggtggcgagggccgggtccaggctgtgctc
aagcggctgggcagcctgcagaggggcaagtgggctgcaaaggaggagcccaaggtgagg
aggagcgtcgaggccatccagaaaccgccccggcgggccctggcacagcgcagagactca
gcaaacagctgcaaacagagggagagtgtcccaggagctcctgccgagccatccaccagc
aagcagcagcatctccctgggaagagacagtccttccttctcacatctcccttgccagaa
agcaccgaggcccaggatggggccagcgatgctgttggtgccacagagaggggcaaaagc
cctgagttagtcctcagcctggagacaaaggtacaggctgccccaaaggaagagccaaaa
tacgagaacgtggtcagtggcagtgccgattcaccccccggccacaccgaggagccaccg
gccacccctgcggccacctga
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