Columba livia (rock pigeon): 102089511 Help Entry 102089511         CDS       T02912                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism clv  Columba livia (rock pigeon) Pathway clv03040   Spliceosome clv04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:clv00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102089511 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     102089511 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:clv03041]     102089511 (PRPF19)    04121 Ubiquitin system [BR:clv04121]     102089511 (PRPF19)    03400 DNA repair and recombination proteins [BR:clv03400]     102089511 (PRPF19) Enzymes [BR:clv01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102089511 (PRPF19) Spliceosome [BR:clv03041]  Complex B   Other components    Prp19 complex     102089511 (PRPF19)  Complex C    Prp19-CDC5 complex     102089511 (PRPF19) Ubiquitin system [BR:clv04121]  Ubiquitin ligases (E3)   U-box type E3    102089511 (PRPF19) DNA repair and recombination proteins [BR:clv03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     102089511 (PRPF19) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_HPS5 U-box Beta-prop_DCAF4 Beta-prop_IFT122_1st PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SPT8 PROPPIN Beta-prop_Nup120_160 Cytochrom_D1 RMC1_N Beta-prop_DCAF12 zf-Nse Beta-prop_WDR35_TULP_N DUF1830 GP3 ATG16 Motif Other DBs NCBI-GeneID:  102089511 NCBI-ProteinID:  XP_021154844 LinkDB All DBs Position Unknown AA seq 582 aa AA seqDB search MALICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQAVPSSQPNVAGAGESMDLGELAGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVIVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ VVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG VAFGHHAKFIASTACWGMSSGVWLEEEEEEELSQSGDEAGGQFERGGDTHPVPLASASLC LGDLGEDDVSLRGDDGLSCPVVTQGATGSCGGAGGRCGKLGG NT seq 1749 nt NT seq  +upstreamnt  +downstreamnt atggccctcatctgctccatttccaacgaggtccccgagcacccctgcgtctccccggtt tccaaccacgtctacgagcggcggctgatcgagaaatacatcgcggagaacggcaccgac cccgtgaacaaccagcccctgtccgaggagcagctcatcgacatcaaagttgcccacccg atccggcccaagccgccgtccgccaccagcatcccggccatcctcaaggctctgcaggat gaatgggacgccgtcatgctgcacagcttcacgctgcgccagcagctccagaccacgcgc caggagctgtcccacgcgctctaccagcacgacgccgcctgccgcgtcattgcccgcctc accaaggaggtcaccgctgccagagaagctttggccactctgaagccgcaggccgggctc atcgtcccacaggcggtgccgtcctcgcagcccaacgtggcgggagccggtgagtccatg gacctgggcgagctcgcaggcatgacccccgagatcatccagaagcttcaagacaaggcg acggtgctgaccacagagcggaagaagagaggcaagactgtgccggaggagctggtgaaa ccggaggagctcagcaaataccggcaggttgcttcgcacgtgggtctgcacagcgccagc atcccgggaattctcgccttggacctctgtccttccgacaccaacaagatcctcaccggc ggggctgataaaaacgtcatcgtctttgacaagagctcggagcagatcctggccacgctc aagggacacaccaagaaggtcaccagcgtcgtcttccacccatctcaggatttggtgttc tcggcttctcccgatgccaccatccgcatctggtctgtccccaacgcctcctgcgtgcag gtcgtccgtgcccacgagggctctgtcacggggctgagcctccacgccacgggcgattat ctcctcagctcctccgacgaccagtattgggctttttcggatatccagacaggccgtgtc ctcaccaaggtgacagatgagagctctggctgcgctctcacttgtgcccagttccacccg gacgggctcatttttggaacagggacgatggattctcagatcaagatctgggatctgaag gaacgcaccaacgtggccaacttccccggccactcgggccccatcaccagcatcgccttc tcggagaacggctactacctggccacggcggccgacgattcctccgtcaaactctgggat ttgcgcaaactcaagaatttcaagacgttgcagctggacaacaacttcgaggtgaagtct ctcatcttcgaccagagcggtacctacctggcgctgggcgggacggacgtgcagatctac atctgcaagcagtggacggaaatcctccacttcacagagcacagtggcctcaccacggga gtggcttttggccaccacgccaagttcatcgcctccaccgcttgctgggggatgtcaagt ggtgtctggctggaggaagaggaggaggaagagttgagtcagagcggggatgaagcgggg ggacagttcgagaggggaggggacactcaccccgtccctttggcctcagcctctctgtgc cttggggaccttggggaagatgatgtgtccctgcgaggtgacgatggcctcagttgtccc gttgtcacccagggagcgacgggctcctgcggaggggcagggggtcggtgtgggaagctg ggggggtga

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