Columba livia (rock pigeon): 102089565
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Entry
102089565 CDS
T02912
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102089565 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102089565 (XPC)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102089565 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
102089565
NCBI-ProteinID:
XP_005507596
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MSSFNISSFLLSHADDFVKKKPSIKKNDSKALARKKEEVCDTAVSKSENKPSKQGAKSLI
KENKKITRNKKNDNKEETCSDSLKPPQKEIKLKRESPVKKEMDEDNAGDDDESEDEWEDV
EELQEPATDKLEEAAVLPAMALPSNPVEIEIETPEQMKKRQRSEKRKAEFETYLRRMMKR
FSKEVREDTHKVHLLCLLANGFYRNRICSQPDLHAIGLSIIPTRFTKVPADQVNLLYLSN
LVKWFVGTFTVNAELSMEKGESLQSTLEKRFAIYAARDEEELVHIFLIILRALQLLCRLV
LSFQPIPLKETSAKGKSSSNRQSLSSTYEGKKSSATTPKAVAKKRPCRKAKWEEESSESE
EDNKEPKTHKTAQTKRTHKAKLTTGSQKQKESSNRESSLAEKDVPVRPKNDRRRRVASKV
CYKEESGSDEGSGSDFEVSEEESDVSDEDFETVSKRPRSSLSSQKSKVMAIKSPKTETSE
SRLSKNSQEADPKPAESTAPPVPHAQKKRNKIISSDEDDGQQEVRKTGTDQWLEVFLECE
DKWVCVDCVHGNVGQPQLCFTYATKPLFYIMGFDNDGSVRDVTQRYDPVWMTATRKSRVD
PEWWEETLQPYKTPYVERDKKEENEFQVKLQDQPLPTAIGEYKNHPLYALKRHLLKYQAI
YPESAAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRIGEAPYKMVKGFSNQARKARL
AEPANRDKEDLALFGRWQTEEYQPPIAVDGKVPRNEYGNVYLFLPSMLPVGCVQLRLPNL
NRLARKLDIDCAQAITGFDFHGGYSHPVTDGYVVCEEYKDILLAAWENEQAEMEKKEKEK
REKRALGNWKLLTKGLLIRERLKQRYSLKTEPPAPEAQKGDGFSSDEEEGPSSETAVGNT
AIYWPQNRQLEKTKESNTTRKSKREKKGEAAQLFPFEKL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctttaacatatcttcttttcttctgtcccatgcagatgattttgtaaaaaag
aagcccagtataaagaagaatgactcaaaagctctggcgaggaagaaggaagaagtttgt
gatactgcagtttccaagtcagaaaataagccttcaaaacaaggagcaaaatcactaata
aaagaaaacaagaaaattactagaaataaaaagaatgacaacaaagaggaaacatgcagt
gactcactgaagccccctcagaaggagataaaattgaagagagaatcccctgttaaaaaa
gagatggatgaagacaatgctggtgatgatgatgaaagcgaagatgaatgggaggatgtg
gaagaactccaggaacctgccacagataagttagaagaagctgctgttcttccagcaatg
gcgctgccaagcaatcctgtcgagatagagattgaaaccccagagcagatgaagaaaaga
cagaggagcgaaaaaaggaaagccgagtttgagacgtatcttcggagaatgatgaaacgt
ttcagcaaggaggttcgtgaggacacacacaaggttcacctcttgtgtttattagcaaat
ggtttctatcggaacaggatctgcagccagccagatcttcatgccatcggtctgtccatc
atccccacgcgcttcacaaaagtgcctgcagaccaagtgaatcttctctacctttccaac
ttggtgaaatggtttgttggaaccttcactgtcaatgctgagctttccatggaaaaaggg
gagtcccttcagtcgaccttggagaagcgttttgccatctatgctgcacgagatgaggaa
gagttggttcatatatttttaattattctgcgagcattacagctgctgtgtcgcctcgtg
ttgtcttttcagcctattcctctcaaggagacaagcgcaaagggaaaaagctcatccaac
agacagtctctcagcagtacctatgagggtaagaagagctctgccacaacacccaaggct
gtggcaaaaaaacgcccctgcagaaaagccaagtgggaggaagaatcctcagagagtgaa
gaagacaacaaggagccaaagacacacaaaactgctcagaccaaaaggacacacaaggca
aagctgactacaggcagccagaagcagaaggaatctagtaacagggagagcagtttagca
gaaaaagatgtgccggtccggcccaagaatgatcgccggagacgagtggcctccaaagtg
tgttacaaagaagagagtggaagtgatgagggcagcggttcggactttgaggtttcagag
gaggagagtgatgtctctgatgaggattttgaaactgtctctaaaagaccgaggagctca
ctgagctcccagaagtcaaaggtaatggctataaaaagcccgaaaactgagacttcagaa
tcaaggctatccaaaaattcacaggaagctgatcctaagccagcggaaagtacagctcca
ccggtgcctcacgcacagaaaaagagaaacaaaattatttctagtgatgaggatgatggg
cagcaggaggtaaggaagacaggcacagaccagtggctggaggttttccttgaatgcgag
gacaagtgggtgtgtgtagactgtgttcacgggaacgttgggcagccccagctgtgcttc
acgtacgccacaaagccgcttttctatatcatgggcttcgacaacgatgggagtgtgagg
gatgtgacacaaagatatgacccggtgtggatgacggcaacgaggaagagtcgtgtggac
cctgagtggtgggaggagacgctgcagccctataaaactccctatgtggaaagagacaag
aaagaggaaaacgagtttcaagttaagcttcaagatcagcctctaccaacagcaattgga
gagtacaaaaaccaccctctgtacgcgctgaagaggcacctcctgaaataccaggcgatc
tatcctgagtcggccgctgtcctggggtactgcaggggggaggctgtctactccagggac
tgtgtacacacgctgcactccagggacacgtggctgaagcaagctcgggtggtgaggatc
ggagaagcgccttacaaaatggtgaaaggattttccaaccaggcgaggaaggcgcgcctg
gcggagcctgcaaaccgggacaaagaggacctggcgctgttcggtcgctggcagacagag
gagtatcagccacctatagcagtggatggaaaggttcctcggaatgaatacggaaacgtc
tatctcttcctgccatccatgttacccgttggctgtgtgcagctgagactcccaaacctg
aacagattggcgcggaagctggacatcgactgcgctcaggccatcacggggtttgatttc
cacggcggctactcgcacccagtcaccgatggctacgttgtctgtgaggagtataaggac
atcctcctcgctgcctgggagaacgaacaagcagaaatggaaaagaaagagaaggagaaa
cgtgaaaaaagggctctggggaactggaagctgctgacaaaaggacttctcatcagagag
cgactgaagcagcgctactccctcaagacggagccaccagcacctgaggcacagaaagga
gacggattctcttctgatgaagaggaaggtccaagttcagagactgcagtagggaacacg
gccatttattggccccaaaatcgccagttagagaaaacgaaagaaagcaacacaaccaga
aaaagcaagcgggaaaagaaaggagaagcagcacagttgttccctttcgagaaactgtga
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