Columba livia (rock pigeon): 102089907
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Entry
102089907 CDS
T02912
Symbol
ERCC6
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102089907 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102089907 (ERCC6)
03400 DNA repair and recombination proteins [BR:
clv03400
]
102089907 (ERCC6)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102089907 (ERCC6)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102089907 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
102089907
NCBI-ProteinID:
XP_021141265
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MKNIVCVNVLMMMWFFFVAFGQRMPTDNSHLPDSIQEQEPVTSASNNCQHNAEESGTEQK
NDIRNSDLGDSIRTPSSDSPSPTSTAFPLEVPRRGQPLLQINRQQIQSISCSAQAAELKG
LGVDVYDQDVLEQGVLQQVDNAINEANKAAKIADAEKEYQSVVDDLRSCTTSLKQIDKII
EQLSPQAADNKNISRKLDSVKRQKYFKEQQLKKIKAKQKRLQAILGGTEILSKVNEIELE
EDEEPGPSCLGSMLMPVQETEWEELIRTGQMTPFGTTVPQKPEKKTRRLMLNEASDFEKY
LADQAKLSSERKKLSLHKGAKKKAQAKNVQCVASTSTKKEKGGKALSKTDKRLKKHIRKL
QKHALQIQSKAEIPKEKKYLEAKKFRCEQEDDSGESEYVPDEELFDPEAAEEEEEHASSG
DNDSDYELRNLSSKRKYSVKRGFKEAEDDADFFPXRDDGDEDIYKQRLRRWQKERLKDKE
HQTAEELSEESDAEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGK
TIQIIAFLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILH
ETGSYTDKKVKLIREIASCHGILITSYSYIRLMQDNIHRYDWHYVILDEGHKIRNPNAAV
TLACKQFRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYAN
ASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQN
FINSKEVYEILNGDMQLFSGLVALRKICNHPDLFSGGPRILKGVPDAEVEEADQFGYWKR
SGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQIFEVFVRDRNYSYFRMDGTTTIASRQPL
VTRFNEDKSIFLFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQV
TVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTE
TSAIFAGTGSDVQVPKRQLNQKLEKPPDNGTSKGDLHLTESSSPKYSKSSDSYSTMHVTN
SSSKAIETSEETKGNLETFDQNGYAKDNAQAATNINSLNKSKEDSLERAEKYMSQSLPGD
AGSSESGKCLNTVLADEGQGAANATVKGDFSLTCGAAGPWEDQVAKTDDGQIDNNHYKCT
SKTKHRVDMMSHKSHKDKSKKKHHKDAKFEGERIPHLVKQKQYRKENSEEEQEDSKKNDD
YVLEKLFRKSGVHSVMKHDAIMEASSADYVLVEAEANRVAQDALRALKISRQRCLGAASG
VPTWTGTSGLSGAPSGIKSRFGRKRNPMLLASHSTCASPVKKCKDADKIKREDVKKSSSN
GHFDGKSGESSPSALDSSTLLAKMRARNHLTLSQQTRHEGDENHYQAPTPVPGSTEYDEL
LVDLRNFVAFGARVDGEASTQELLHEFESKLTVAQSSVFRELLRNVCTFYRRPNGEGVWK
LKTEFY
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacattgtgtgtgtgaatgttcttatgatgatgtggttcttctttgttgccttt
gggcagaggatgccaacagacaacagccacctgccagacagtatccaagaacaagagcct
gttacttctgcaagcaataattgccagcataatgctgaggaatcaggaactgaacaaaaa
aatgacattcgtaacagtgacctgggtgatagtattagaactcccagctctgacagcccg
tctccgacatccacggcttttcctttggaggtgcccaggagaggacaaccccttttacag
atcaacaggcagcagattcagtccatctcatgtagtgcacaggctgctgagctcaaaggt
ttaggagttgatgtctatgaccaagatgtattggagcaaggagttcttcagcaagtagat
aatgcaattaatgaagctaataaagcagcaaaaatagctgatgcggagaaagagtatcag
tctgtggtggatgacttaagatcatgtacaacatccctgaagcaaattgataaaattatt
gagcaactttcacctcaagctgctgacaacaaaaatataagcagaaaactagattctgta
aaacggcaaaaatatttcaaggagcaacagctgaagaagatcaaagcaaaacaaaagcgt
ctccaagcaattcttggtggaacagagattctcagtaaagtaaatgagattgaactggag
gaagatgaagaacctggtccatcatgtcttggcagtatgcttatgcctgttcaggaaaca
gaatgggaagagctcattcgtactggccagatgactccatttggaactacagtacctcag
aagccagagaagaagacacggcgattgatgctaaatgaagcatctgactttgagaagtac
ttagcagaccaagctaagctgtcatctgaaagaaagaagttatctcttcacaaaggagca
aagaagaaagcacaagccaaaaatgttcagtgtgtagcttctacatctactaaaaaggaa
aaagggggtaaagccctgtcaaaaacagataagcgcttaaaaaaacacataagaaaactc
cagaagcatgcccttcagattcaatcaaaagcagagattccaaaagaaaagaaatatctt
gaggccaagaagttcaggtgtgaacaggaggatgatagtggagagtctgagtatgtacct
gatgaggagctctttgatccagaagcagcagaagaggaggaagagcatgcatcttctggt
gacaatgattctgattatgaactcaggaatttgtcaagtaaaagaaaatattcagtgaag
agaggttttaaagaagctgaagatgatgcggacttctttccanagagagatgatggagat
gaagacatttataaacagagactaaggaggtggcaaaaagaacgtttgaaggacaaagaa
catcaaacagcagaggaactttctgaagaaagtgatgctgaatttgaagagggtttcaaa
gtaccaggatttctgttcaaaaagctttttaagtaccagcagacaggtgttaggtggctc
tgggaattgcactgccagcaggcaggaggaattctgggagatgagatgggattgggcaag
accattcagataattgccttcttggcaggtctgagctacagcaagatcaggactcgtggt
tcaaattacaggtaccagggattgggtccaacagtgattgtttgtccagctactgtgatg
catcagtgggtaaaagaattccacacctggtggcctccatttagagtcgcgattctccat
gaaactggttcttacaccgacaaaaaggtgaaactaatccgtgaaattgcttcctgccat
ggaattttaattacatcttattcatacattcgactgatgcaggataacatccacagatat
gactggcattatgtgattctggatgagggtcacaaaatccgaaatccaaatgctgcagtc
acactggcatgcaagcagttccgcacaccccatcgaatcatcttgtctggctcgcctatg
caaaataacctaaaggagctctggtccctgtttgactttatattcccagggaaactggga
acacttcctgtgttcatggagcaattttcagttccgataaccatgggaggttatgccaat
gcctctcctgttcaggttaaaactgcgtacaaatgtgcctgtgtgttacgggacaccata
aatccctatttgctgcgaagaatgaaggctgatgtgaaaatgagcctttcacttccagat
aaaaatgaacaggtcctcttctgccgtttgacagatgagcagcgtcaagtctatcaaaat
ttcatcaactcaaaagaagtatacgagattctcaacggagacatgcagcttttctcagga
ctagtagctttgagaaagatttgcaaccaccctgacctcttctctggtggtccgaggatt
ttgaagggtgtaccagatgctgaagtggaggaagcagatcagttcgggtactggaaacgt
tctggaaaaatgatagtggtagaatccttgctgaaaatatggcacaagcaaggtcacaga
gtgttgttttttactcagtcaagacagatgctgcagatatttgaagtctttgtgagagat
agaaactattcctacttcaggatggatggcaccacaacaatagcttccagacagcccctt
gtaacaagatttaatgaggacaaatccatatttctttttcttctgacaactcgtgttggt
ggcattggagttaacttgactggtgctgaccgagttattatttatgatcctgactggaat
cccagtacagatacacaggctcgggaacgtgcttggagaataggccaaaagaagcaggtg
actgtgtacaggcttctcactgcaggtactattgaagagaagatctaccacagacaaatc
ttcaaacagtttttaacaaacagagtgctgaaagaccctaaacagagacgctttttcaaa
tcaaatgatctttatgaactttttactctgagcagtccagatgtgtctcaggggacagaa
acaagtgcaatttttgcaggtactggttcagatgttcaagtcccaaaacgccaattgaat
caaaagcttgaaaagccgcctgacaatggtacttctaaaggtgatctccatcttacagaa
agcagctcaccgaagtacagcaagtcatctgactcctactcaaccatgcacgtgacaaat
tcttcttctaaagcaatagagacaagtgaggaaaccaaaggaaatttggaaacctttgac
caaaacggctatgcgaaagataatgcacaagctgctactaatataaattcattgaataaa
agcaaggaggacagcttggaaagagctgaaaaatacatgtcccagtcactgccaggtgat
gcagggtcttcagagagtggcaaatgtctgaacactgtgctggctgatgaaggacaagga
gcagcaaatgcaactgtcaagggagacttcagccttacatgtggtgcagctggcccttgg
gaagaccaagttgctaaaactgacgatgggcaaatagataataatcattataagtgtacc
tcaaaaacaaaacacagggtggatatgatgtcacataagagccacaaagacaagtctaag
aagaaacatcacaaagatgccaaatttgaaggagagcgcattcctcatctagtgaaacag
aagcaatacagaaaagagaacagtgaagaagagcaggaagactcaaagaaaaatgatgat
tacgtcttggagaaacttttcagaaaatcaggggtacacagtgttatgaagcatgatgcc
attatggaagcttccagtgcagattatgtgctggtggaagcagaagcaaacagagtggcg
caagatgccttaagagctttaaaaatctctcgacagcgttgtttaggagctgcttctggt
gtgccaacctggacaggcacgagtgggctttcaggtgcaccatcaggaataaagagtcgg
tttggtcgcaaaagaaacccaatgctgcttgcttcacattccacttgtgcatcacctgtg
aagaagtgcaaggatgcagataaaataaagagagaagatgtaaagaagagtagttccaat
ggacactttgatggaaaatctggagaatcgtcgcccagtgcactagactcttcaacatta
ttagccaagatgagggcaagaaaccaccttactttgtcacaacagacaaggcatgaagga
gatgagaatcattaccaagcacccaccccagtcccaggttcaactgaatacgatgaactg
ctcgtggatctgcgtaacttcgtagcgttcggggcccgtgtggatggcgaggcgagcacc
caggaactgctgcatgaatttgagtccaaactgactgtggcgcagtcctccgtctttaga
gaacttctccgcaacgtctgcaccttctataggaggccaaatggtgaaggtgtctggaaa
ctaaagacagaattctactga
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integrated database retrieval system
