Columba livia (rock pigeon): 102089968
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Entry
102089968 CDS
T02912
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clv03041
]
102089968 (DDX20)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102089968 (DDX20)
Spliceosome [BR:
clv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
102089968 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
SiaC
CMS1
Motif
Other DBs
NCBI-GeneID:
102089968
NCBI-ProteinID:
XP_021139194
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MEGLECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKL
LEEGSFQEQINWIYSSLPANKQMLAVSATYPESLANALTRYMRDPTFVRLNPTDPSLIGL
KQYYKIVTSHPLPHKTFEEKTQHLQDLFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPA
ECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHR
IGRAGRFGTLGLAVTYCCRGEEENMMMKIAQKCNLQLLPLPEPIPPGMMDQFEDGEVEIK
PVTHTSVNSDTVCLRPEEPGLQSVRNTFPEVPEPHSNLPADNSSVERPKKALKQKQMKKC
TDSANRAKGCRNPQTSSCHTEQRSRVKTVSRLDGQHKEHNTQSPEEEALKKDLPRIPCLS
SFKNHQNNPWSFSDFVEDYEYFIKEGSEREVEILRSYSGPGEQHELPKNGGVEWKEVECN
TEMIASGGVSSDNDGSYSSRASSKSREDNSCFEMFSDTQEKNAVPTACRGHADFSSTPEE
PQEPSRVPKQNQAKKKVVKQNAKQKKSRCRQSPSPSTRKPEDDCSCSSWDDGVPNEAWSY
KNYWKSYYQAWQNYYTAVSQYRRSYRQFNWVNAYHVNSVYLQELLKSGD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcttggaatgccacgtcttcattggcgggactcctttgaaccaggacaaaatc
agactaaagaagtgccacatagcagttggctccccaggtcgaataaaacagctcatagag
ctggactacttgaacacagccagtatccggcttttcattctggatgaagcagacaagctg
ttggaagaaggcagctttcaggaacaaatcaattggatttactcttcactaccagccaac
aaacagatgcttgccgtttcagccacttacccggaatcattagcgaacgctttgaccagg
tacatgagagacccaacatttgtgaggttgaaccctactgacccaagtctcattgggctg
aagcagtattacaaaatcgtgacttcccatccgcttccgcataaaacgtttgaggaaaaa
acccagcatctacaggacttgttcagcaagattccatttaatcaagccttagtcttctca
aatttgcatagcagggctcaacatctggctgaaatcctgacgtccagaggttttcctgcc
gagtgcatctcagggagcatgaatcaaaatcagcgtcttgatgctatggctaaattaaag
caattccactgcagagttctgatttccacagacttgacgtctcgtggaatcgacgctgag
aaagtgaatctggttatcaacctggacgtccctgtggactgggagacgtacatgcaccgc
atcggcagagccggccgcttcggaactttaggcttagctgtgacgtactgctgccgcgga
gaggaagaaaacatgatgatgaaaattgctcagaagtgtaaccttcagctccttccttta
ccagagcctataccccctggaatgatggatcagtttgaagatggggaggtagaaatcaaa
cctgttacgcatacttcagtgaattctgacactgtatgtctgagaccagaggaaccagga
ctgcagtctgtccgaaacacttttccagaggtacctgagcctcattctaatcttccagct
gataattcttctgtagaaaggccaaaaaaggctctgaagcaaaagcagatgaagaagtgc
acagattctgcaaatagagcaaaaggttgcagaaacccccaaacttccagttgccacaca
gaacagaggagtcgagtcaaaactgtctctagactggatggacaacataaagaacataac
actcagtctccagaagaggaggccttgaaaaaagatctccccagaattccatgcttgtct
tctttcaaaaaccaccagaacaatccctggagcttctcggactttgttgaagactatgag
tatttcattaaagaagggtcggagagagaggttgaaattttaagaagctattcaggccca
ggagaacaacacgagctccccaaaaatggtggtgtagagtggaaagaggtggaatgtaat
accgagatgatcgcaagcggtggtgtgtccagtgacaatgatggttcgtacagttcccgg
gcttcttccaagagcagggaggataactcgtgctttgaaatgttttcggatacacaggag
aaaaatgctgttcccacagcatgtcggggccacgcagacttcagttcgacaccagaggag
cctcaggagccgtcacgagtcccaaagcaaaatcaagcaaaaaagaaagttgtgaaacaa
aacgctaaacaaaagaaaagccgttgccgtcagtcccctagtccttccacgagaaaacca
gaagatgactgttcctgcagctcgtgggatgacggtgttccaaatgaggcttggagttac
aaaaactactggaaatcatattatcaggcatggcaaaactactacactgcggtgtctcaa
tacaggagaagttacagacagtttaactgggtgaacgcctatcacgtcaactcagtctat
cttcaggagctgctgaaaagcggggattga
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