Columba livia (rock pigeon): 102089980
Help
Entry
102089980 CDS
T02912
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102089980 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102089980 (DDX6)
03036 Chromosome and associated proteins [BR:
clv03036
]
102089980 (DDX6)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102089980 (DDX6)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102089980 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
102089980 (DDX6)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102089980 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
102089980
NCBI-ProteinID:
XP_021140859
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTPTQQQMNQLKNANTINNGTQQQAQ
SMTTALKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctgtccagtcagaacgggcag
ttgagaggccctgtaaaacccagcgggggcccgggaggtggaggcacaccgactcagcag
cagatgaaccagctgaaaaatgccaacacaatcaataatggcactcaacagcaagcacag
agtatgaccaccgctctcaaacctggtgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttcggacgtgacctccacaaaaggaaacgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttggctagagcg
aaaaatggaacaggcaagagtggagcctacctcattcctttacttgaacggctagactta
aagaaggacaatatacaagcaatggtgattgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaaacacatgggaggtgccaaagtgatggcaacaaca
ggaggaaccaatttgcgagatgacataatgaggcttgatgatacagtgcatgtggtgata
gctacccctgggagaattctcgatctcatcaagaaaggagtagcaaaagttgagcacgtc
cagatgatagtattggatgaggcagataagttactgtctcaagattttgttcaaataatg
gaggacattattctgacgctgcctaaaaacagacagattttgctttactcagccactttc
cctttgagtgtgcagaaattcatgaattcccatttgcagaaaccttatgagattaatctg
atggaggagctgaccttgaagggagttacccagtactatgcttatgtaactgagcgtcag
aaagtacactgcctcaatacgctgttttccaggctccagattaaccagtcgatcattttc
tgcaactcctctcaacgggttgaattgctagccaaaaagatctcccagctgggctactcc
tgcttctatatccacgctaaaatgaggcaggagcaccgcaaccgtgtattccacgatttc
cgaaatggcttatgccgcaaccttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgtggtgataaactttgatttcccaaagctggcagagacttatctccat
cgtattggcagatcaggtcgctttggtcatcttggcctggccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaggagcagctgggaactgaaattaaacccata
ccaagcaacattgacaagagcctgtatgtggcagaataccacagtgaacctgtagaagat
gagaaacagtaa
DBGET
integrated database retrieval system
