Columba livia (rock pigeon): 102090026
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Entry
102090026 CDS
T02912
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clv01001
]
102090026 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102090026 (TRIM28)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102090026 (TRIM28)
Protein kinases [BR:
clv01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102090026 (TRIM28)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102090026 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
DDE_Tnp_IS240
UNC-79
DUF2992
Motif
Other DBs
NCBI-GeneID:
102090026
NCBI-ProteinID:
XP_021138144
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MLQELGDPVPCAVTPGTALGGCVTVTIHCAGTPGTALGDCVTLTVPCAVTPGTALGGCVT
LTVPHVVTPGTALGGCVTLTVPHRAALFSAGTGCGSVGGRVVTTASLTPHRTPPPAVTCP
ICQHPCALKDVVENYFLKDSGTKTAAASQESTQCCTSFPAGNGKAKEGERAARCAAHPGE
MLVFFCDTCDTLTCHDCQLSGHKDHQSGAAILTLSIRQVTDVQKQVQVDVKLAILQIMKE
LNKRGRVLVSDAQRAMEGQQQKLEQQHRAMTKLQRQQEHVLRFASWALESDNSTALLLSK
RLISVQLQHALKMIVDPVEPQGDVKFKWDLNAWTKSAESFGPPRGTGPPWILGRAGICPP
GIHPRPRDLRRVCCQAGAMVMCGRCEHCYHLDCHLPPLQEVPRYCWDPLGSDLTLIRAKL
QEKLSPHYRCPEEFARDLWRMIRQFNRLTEDKADVQSILGLQRFFEARLSAAFGDRKFSS
ALCLDPVIPLDGAKGSAAPPLGP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggagctgggggaccccgtcccctgtgcggtgacaccagggacagccctgggg
ggctgtgtcaccgtcaccatccactgtgcggggacaccggggacagccctgggggactgt
gtcaccctcaccgtcccctgtgcggtgacaccggggacagccctggggggctgtgtcacc
ctcaccgtcccccatgtggtgacaccggggacagccctggggggctgtgtcaccctcacc
gtcccccatcgagccgccctcttttcagcgggcacagggtgtgggtccgtggggggacgc
gtggtgacaaccgcgtccctgaccccccaccgcacccctcccccagctgtcacctgcccc
atctgccaacacccgtgcgccctcaaggacgtggtggagaactatttcctcaaggacagc
gggaccaagacagccgccgccagccaggaatccactcagtgctgcaccagctttcccgca
ggtaacggcaaggcgaaggagggcgagcgcgccgcgcgctgcgccgcgcaccccggcgag
atgctcgtcttcttctgcgacacctgcgacacgctcacctgccacgactgccagctcagc
ggccacaaggaccaccagtctggggccgccattttgaccctgagcatccgccaggtgacg
gacgtgcagaagcaggtgcaggtggacgtcaagctggccattctccagatcatgaaggag
ctcaacaagcggggccgggtgctggtgagcgacgcccagcgcgccatggaggggcagcag
cagaagctggagcagcagcaccgcgccatgaccaagctgcagcggcagcaggagcacgtc
ctgcgcttcgcctcctgggccctggagagcgacaacagcaccgcgctgctgctatccaag
aggctgatctccgtccagctccagcacgccctcaagatgatcgtggaccccgtggagccg
cagggcgacgtcaagttcaagtgggacctcaacgcctggaccaagagcgccgagagcttc
ggacccccccggggtaccgggcccccctggatcctcggcagggctgggatctgccccccc
gggatccacccccggccccgcgatctccgccgcgtgtgctgccaggcgggggccatggtg
atgtgcggccgctgcgagcactgctaccacctcgactgccacctccccccgctccaggag
gtccccaggtactgctgggatccgctgggatccgacctgacgctgatccgcgccaagctg
caggagaagctcagcccccactaccgctgccccgaggagttcgcccgcgacctctggagg
atgatccgccagttcaaccgcctcaccgaggacaaggcggacgtgcagtccatcctgggc
ctgcagcggttcttcgaggcccggctcagcgccgccttcggcgaccgcaagttctcctcc
gcgctctgcctcgaccccgtcatccccctggacggggccaaaggctccgccgcgcccccc
ctgggaccctga
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