Columba livia (rock pigeon): 102090071
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Entry
102090071 CDS
T02912
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X2
KO
K13167
SR-related and CTD-associated factor 4
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clv03021
]
102090071 (SCAF4)
03041 Spliceosome [BR:
clv03041
]
102090071 (SCAF4)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102090071 (SCAF4)
Spliceosome [BR:
clv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102090071 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102090071
NCBI-ProteinID:
XP_013225527
UniProt:
A0A2I0MSG5
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MEASGVRSAAAVATDGGQRSRGDAAAQLFSLMEMKPPISRAKMILITKAAIKAIKLYKHV
VQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCP
SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSATAPVTENAANNEGSPPPPAKVPS
EPPQVTANSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVM
AQVQAITAQLKTTAAQPPEQKAAFPPPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAP
SPSVSQPAFGFPAEGVQQTVFPQIPNMDPFQQRMMGMQQDTMRHQVPLPPNGQMPGFGLL
PTPQFPPMAQPVIPPTAPVQQTFQSPFPVQSESHMQKPHQQDMEVEQPPIQEGKRHVSDS
RKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERR
SKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMV
HRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPED
LESFCEGGMLDNETLCPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMP
APITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMH
LPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVSEDTTKDSSVGNPIPTVVSGSRGN
AETTNNSKIYATVPPPVAPTNVPAPVTQGVPLLGTQGVAPPPPAPVVGLQTPSTGLLGAR
PGLIPLQRPPGMPPPPLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPG
HFVRPGGMPGSGGQGGPEENRDGRQFRNDRQTFTSNRDQERFGRRSFGNRVENDRERYGN
RNEERDHERGGNRDRRDWGRRSPERDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEEN
RGKEKSEVTDRADGDKNHESHSGKVEDADIVSELAAGESEPTGAKPVEELPSEATSSVEH
AEKDLGSVAEAPR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagcggggtcaggtccgccgcggcagttgcaacggacggagggcagcgttcc
cggggcgacgctgcagcccagctcttttcattgatggagatgaaacctcctatttcacga
gcgaaaatgattcttatcacaaaagctgccattaaagctattaagctctacaagcatgtt
gtccagattgtagagaagtttatcaaaaagtgcaaaccggaatataaggtccctggattg
tacgttattgactctattgttcgtcagtctcgtcaccagtttggaacagacaaagatgtt
tttgggccaagattctctaagaatattactgccacattccagtatttgtatctctgtcca
tctgaagacaagagtaaaatagtccgtgtactgaacctttggcagaaaaatggagtattt
aaaattgaaataattcaaccgcttctggatatggcagcaggaactagtgccactgcacca
gtgacagaaaatgctgctaataatgaaggttcaccgccccctccagcgaaggttccttca
gagccccctcaggttactgctaactcagtacctactgtgccacagttgcccagttctgat
gcctttgcagctgtagctcagttgtttcaaacaacacaaggacagcagcttcagcaaatt
cttcagacttttcaacagcctcaaaagccccagtcaccagtcatagataacactgtgatg
gctcaggttcaagctattactgctcagttgaaaactacagcagcacaaccaccagaacag
aaagctgctttcccaccgcctgagcaaaaaacatcatttgacaaaaaattgctggatcgg
tttgactatgatgatgaaccagaagcagtggaagattcaaagaaagaagattcagctcct
tctccttcagtttctcagccagcttttgggtttccagcagaaggtgtacaacagacagta
tttcctcaaatcccaaatatggatccttttcagcagcggatgatgggaatgcagcaggat
acaatgcgtcaccaggttccgcttcctcctaacgggcaaatgccaggttttggcctcctg
cctaccccgcagtttccacctatggctcagcctgtgattccaccaacagcacctgtgcag
caaacttttcagtctccttttccagtacagagtgaatcacacatgcagaaaccacatcag
caggatatggaagtggagcagccacctattcaagagggaaaacggcatgtttctgacagc
agaaagtcaagatctagatctgcatccaggtcacctaaaaggagacgatcaagatctggc
tcccgatctcgaaggtcacgtcaccgtcgatctcgatctcggtccagggatagacgccga
cactctcctaagtctcggtcacaagaaagacgtgaacgagagagggagagagaacgcagg
tcaaaaggccttcctcagataaagtcagaaactgttagtgtttgtagtactacgctttgg
gtaggacaacttgacaaaaggacaactcaacaggacgttggaagtcttttggaggagttt
ggcccaattgaatcaataaatatgataccgcctagaggatgtgcctatattgtaatggtt
cacagacaagatgcttaccgtgccctgcaaaaactgagccgaggaaacttcaaagtcaat
cagaaatctataaagattgcatgggctttgaataaaggaataaagccagattataagcag
tattgggatgtagaattaggtgttacttacataccatgggacaaagtaaaacctgaagat
cttgaaagtttctgtgagggaggaatgttggacaacgaaactctttgtccagagtggaag
gggattcccaagaagtctgaaaatgaagtagctcaaaatggaggtgcagaagctacacat
aatgaaccagtgtcgcctatacctaaagctttacctgttccaattcctgttcccatgcct
gcaccaataacagtacctcctccacaggttccaccacatccatcaggtcctcctgtggtt
ggtgcgctccagccacctgctttcacagcacctttaggaatcccacctcctgggtttgct
cctggagtgccaccaccgccgccacctccgtttttacgacctggtttcaacccgatgcat
ttacccccaggatttcttcctcctggaccaccaccacctataactcctccagtatcagtt
cctcacactccagcagtaaacatcccaaactctacagcaactggtgtaagtgaagacact
acaaaagattcatccgtaggaaatcccatcccaacagtggtttctggatccagggggaat
gctgaaactaccaataattccaaaatatatgcgactgttccacctcctgtagcacctact
aatgtacctgctcctgtcacccaaggtgttccacttcttggcactcagggggttgcgcca
cccccgccagcccctgttgttgggttgcagaccccatccactggcctcttgggtgcccgg
cctggtttgataccgctccagcgaccgcccggaatgccgccccctcctctgcagcggttc
cccttgatgcccccgcgacacatgcctccccacatgatgcacagagggcccccgccaggg
ccagggggctttgggatgccacccccccacggaatgaaaacccccttcccaccgccgggt
cactttgtgagacctggggggatgccgggaagcggggggcaaggcggacccgaggaaaac
agagatgggaggcagttcaggaacgacaggcagacgttcacgtctaacagagaccaggaa
aggtttggaaggagatcttttggaaatcgggtagaaaacgatcgtgagcgctacggtaac
cgcaacgaggaaagagatcacgagcgaggtggtaatcgtgacaggcgagactggggacga
agaagccctgagcgcgacagacacagagacttggaggacaggaacaggcggtccagtggc
caccgagacagagagagagattcgcgggacagggaatctcgtagagacaaggaagaaaac
cgaggaaaggagaaatcggaggtgacagacagggcagatggcgacaaaaaccatgaatct
catagcggcaaagtggaagacgcagacattgtttctgaacttgctgcgggagagtctgaa
cctacaggtgcaaaacccgtggaagagttaccatccgaggctacctcatctgtggaacac
gcggagaaggatctgggctcagtggcggaggctcctcgctag
DBGET
integrated database retrieval system
