KEGG   Columba livia (rock pigeon): 102090293
Entry
102090293         CDS       T02912                                 
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102090293 (CHD4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clv03036]
    102090293 (CHD4)
Chromosome and associated proteins [BR:clv03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102090293 (CHD4)
  Chromatin remodeling factors
   NuRD complex
    102090293 (CHD4)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo HDA2-3 ResIII PHD-1st_NSD PHDvar_NSD HTH_Hrp3 PHD_2 DEAD
Other DBs
NCBI-GeneID: 102090293
NCBI-ProteinID: XP_013223739
UniProt: A0A2I0MLP4
LinkDB
Position
Unknown
AA seq 1917 aa
MASGIGSPSPCSGGSDDDEMEILLNNAIPQHLEPEEEPEEELLSEAETPKIKKKKKPKKL
KEPKVPKLSKRQKKELGDSSGEGNEFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKK
NKAKRKEEEEEEEEDDDSKEPKSSAQLLEDWGMEDIDHIFTEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTNVDTV
LPQPPVDVPLRKAKTKEGKGPNARRKPKASPRVPDIKKPKTKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYE
TDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKED
NSEGEEILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNG
EWLCPRCTCPALKGKVQKILIWKWGQPPVGPPPPRPPDADPNAPPPKPLEGRPERQFFVK
WQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKYA
EMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYDL
YKQGYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTL
HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST
IINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFH
VLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQ
NNLEELFHLLXFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNM
PSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFP
VAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFL
EHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDS
DWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSK
TGSMSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVIHYDDKAIERLLDRNQDETED
TELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAARRP
SRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRD
LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQ
EFEHVNGRWSMPELAEIEENKKLSQPSSPSPKTPTPSTPGDTQPNTPAPVPPPEEGVKVE
EGAGAKEQGEPSEPEKELSASATESEVPMEQCVQPVETPPQEAKSPVNPSEADEKKVEEP
EVKERADEPMEVESKADVEKVEDRAPIENPSEPPIITLDEKDEKKDDDKRDVVMLQNGEM
LKESVDERHKKGVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLA
GIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQL
RRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEE
LLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRSSEPPPPPPPQQVAQQQ
NT seq 5754 nt   +upstreamnt  +downstreamnt
atggcatcgggcattggatctccgtcgccgtgctcagggggcagtgatgatgatgagatg
gagatcctgttgaacaacgctatcccccagcatctagagcctgaagaagagcctgaggaa
gagcttctgtcagaggctgagacacccaaaatcaagaagaagaagaagcccaagaaacta
aaggaacccaaagtgcccaagctcagcaagcgtcagaagaaggagctgggagacagctct
ggtgaggggaatgagtttgtggaggaagaagaggaggttctacgttcagacagtgagggc
agcgactacactcctggaaagaagaaaaagaagaaattagggcccaagaaggaaaagaaa
aataaagccaagcgcaaggaggaggaagaagaggaggaagaagatgatgactcaaaggag
ccaaagtcatctgctcagctcctggaagactggggcatggaggatattgatcatatcttc
acagaggaggattaccgcactctcaccaactacaaagctttcagccagtttgtcaggcca
cttattgcagcaaagaaccctaaaatagcagtgtcgaagatgatgatggtactgggagcc
aaatggagggagtttagcacaaacaaccccttcaagggaagttcaggtgcatctgtggca
gctgctgcagcggcagctgttgcagtagtggagagtatggtgaccaatgtggataccgtc
ctgccacagcctcctgtagatgtgccactcaggaaagccaagacaaaggagggcaaagga
cccaatgcccgtcggaagccaaaggccagtcctcgtgttcctgatatcaagaaacctaaa
acaaagaaggtggcacctttgaaaatcaaactgggaggatttggctccaagcgtaaaaga
tcatcgagtgaagatgatgatctggatgtggagtcagacttcgatgatgccagtatcaat
agctactctgtttcagatggatctacaagccgaagtagccgcagtcgcaaaaaactcaaa
gctgggaaaaagaaaaagaaaggtgaggaggactccacagtggctgtggatggctatgag
actgatcaccaggactactgtgaggtgtgccagcagggaggagaaattatattgtgtgat
acctgccctcgtgcctaccacatggtttgcctggacccagacatggagaaagccccggag
ggcaaatggagctgcccacactgtgaaaaagagggcattcagtgggaagcaaaggaggat
aactctgagggtgaggaaatcttggaggatgttgtgggggatgctgaggaagaggatgac
caccatatggagttctgtagagtctgcaaggatggaggagagctgctgtgctgtgatgcc
tgtccttcatcctatcatatccactgtctgaatcccccattgccagagattcccaacgga
gagtggctgtgtcctcgctgcacttgcccagctttgaaaggaaaagtgcagaagatcttg
atctggaaatggggtcagcccccagttggtcccccaccaccacgtccacctgatgcagac
cctaatgctcctccgcctaaacctctggagggccggcctgaaaggcagttctttgttaaa
tggcagggcatgtcctactggcactgttcctgggtgtcagagttgcagctggagctgcac
tgccaggtcatgtttcgtaactaccagcgcaaaaatgatatggatgagccaccctcaggg
gactttggaggggaagaggagaaaagtcgaaagagaaaaaacaaggaccccaaatatgct
gagatggaggagcgcttctatcgctacgggatcaagcctgagtggatgatgatccacagg
atccttaatcatagtgtggataagaaggggaatgtccactatttaattaaatggagggac
ttaccctatgaccaggcctcctgggaaagtgaggatgtggatatccaagactatgacctc
tacaagcaaggctactggaatcatagggagctgatgagaggtgaagagggcagacctggt
aagaagttaaagaaagtgaagatgcggaaactggaaaggccccctgagactcccacagta
gatccaacagtgaaatatgaccggcaaccagagtacctcgatgtaacgggagggacctta
catccctaccaactggaaggactgaactggctgcgcttctcttgggcccagggcacagat
acaatcttggccgatgagatgggtctgggaaagactgtgcagacagccgtgttcctgtat
tccttatacaaagagggccactcaaagggtcccttcttggtgagtgccccactgtccaca
atcatcaactgggaacgagaatttgagatgtgggccccagatatgtatgtagtgacctat
gtcggggacaaagacagccgggccatcatccgtgagaacgaattcacttttgaggataat
gccatacgtggaggcaaaaaagcatccagaatgaagaaggaggctgctgtgaagttccat
gtgcttctcacctcctatgaactgatcacaattgacatggccatactgggctctattgac
tgggcctgtctcattgtggatgaagctcacagactgaagaacaaccagtctaagttcttc
cgggtgctgaatggttactccctccagcacaaactgctgcttacaggaactcccctgcag
aacaacctggaagagctcttccacctgctnnncttcctgacaccagaaagattccataac
ttggagggcttcctagaagagtttgcagatattgccaaggaagaccagatcaagaagctg
catgacatgctgggcccacacatgctgaggcgtctcaaagctgatgttttcaagaatatg
ccgtcaaagactgaactcattgtcagagtggagctgagccccatgcagaagaagtattat
aaatacattttgacaagaaactttgaggcactgaacgcacggggtggtggtaaccaagtc
tccttgctcaacgttgttatggatctgaagaagtgctgtaaccacccctacctcttccct
gtggctgctatggaagctccaaaaatgccaaatggcatgtatgatggtagtgctcttatt
cgagcctctggaaaactgttgctgctgcagaagatgttgaagaaccttaaggagggaggt
cacagggtgctcatattctctcagatgactaaaatgttggaccttctagaagactttttg
gaacatgaagggtacaaatatgagcggattgatggaggaatcacagggaacatgcgtcag
gaggctattgatcgtttcaatgctcctggtgctcagcagttctgctttctgctttctact
cgagctgggggtcttggtattaacttggccacagcagatactgtgattatctatgattca
gactggaacccccacaatgacatccaggccttcagtcgtgcacacagaattggacagaac
aagaaagtgatgatataccgctttgtgacaagggcctcagtggaggagcgtatcactcag
gtggccaagaagaaaatgatgctaactcatctggtagtgagaccagggttgggctccaag
acaggctccatgtccaaacaggaacttgatgacattctcaaatttggcactgaagagctc
ttcaaggatgaggctactgaagggggggataacaaggaaggtgaggacagcagtgtcatc
cactatgatgacaaagcaattgagcgtctgttggatcggaaccaggatgaaacagaagat
acagaacttcaaggcatgaatgagtatctcagctccttcaaagtggcccagtatgtggtt
cgtgaagaggagatgggggaggaagaggaggttgaacgggagatcattaagcaggaggag
tcagtggatcctgattactgggagaaactgctgcgtcaccattatgaacagcaacaggag
gatctggccaggaatctgggcaagggcaaacgtattcgcaagcaagttaactacaacgat
ggctcacaggaggacagagactggcaggatgaccagtcagataatcagtcagactattca
gttgcttctgaagaaggtgacgaggactttgatgagaggtctgaagcagctcgtcggcct
agccgcaaaggcctgagaaacgataaggataagcctctgcctcccttacttgcccgtgtg
ggagggaacattgaggtcttgggtttcaatgcccgccagcggaaagccttcctcaatgct
atcatgcgctatggaatgccacctcaggatgccttcaccactcagtggcttgttcgggac
ctccgtggcaagtcagagaaagagttcaaggcctatgtctcgctgttcatgcgtcattta
tgtgaacctggagctgatggtgcagagacctttgcagatggggtcccacgggaaggtctt
tctcgacagcatgtccttactcgcattggggtcatgtctcttatacgcaaaaaggtgcag
gaatttgagcatgtgaatggccgttggagtatgccagaactggcagagatagaggagaac
aagaaactttcacagccaagctcgccctctcccaaaactccaactccttcaacaccaggg
gatacgcaaccaaatacacctgcccctgtccctccacctgaagaaggagtaaaagtagaa
gaaggagccggtgcaaaggagcaaggagagccatctgagccagagaaagaactcagtgcc
tctgctactgaatcagaggtccctatggagcaatgtgtccagcctgtggagacaccacca
caggaagcaaaatccccggtgaacccctcagaagcagatgaaaaaaaagtagaagaacca
gaggtgaaggaaagagcagatgagccaatggaagtagaaagcaaagctgatgtggagaaa
gtggaagacagagcacctattgagaatccctctgaacctcctataatcactctggatgag
aaagatgagaaaaaggatgatgataagagagatgtggtgatgctgcagaacggagagatg
ctgaaagagtcagtagatgaaaggcacaagaagggagtaaagcagcgcttcatgttcaac
atagcagacggtggcttcactgaactacactccctgtggcagaatgaagagcgagctgca
actgtcacaaagaagacctatgagatctggcatcggcggcatgactactggctccttgct
ggaattatcaatcatggctatgcccgttggcaggatattcagaatgatccacgttacgcc
atcctcaatgaacccttcaagggtgagatgaacaggggtaacttcctggaaataaagaat
aagttcttggcaaggagatttaagctcctggagcaagcgctggtgattgaggagcagttg
cggcgagctgcctatctaaacatgtcagaagacccatctcatccatctatggctctgaac
acacgtttcgcagaggtggaatgcctggctgagagccaccagcacctctccaaggagtca
atggctgggaataaaccagccaacgcggtgctgcacaaagttctgaagcagctggaggag
ctgttgagtgacatgaaggcagatgtgactcgtttgcctgccaccattgcccgtatcccc
cctgtggcagtgcgcctgcagatgtccgagcgcaacatcctcagccggctggccaaccgc
agtagtgagccccctccaccaccccctccccaacaagtggcccagcagcagtga

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