Columba livia (rock pigeon): 102090293
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Entry
102090293 CDS
T02912
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102090293 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102090293 (CHD4)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102090293 (CHD4)
Chromatin remodeling factors
NuRD complex
102090293 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
102090293
NCBI-ProteinID:
XP_013223739
UniProt:
A0A2I0MLP4
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MASGIGSPSPCSGGSDDDEMEILLNNAIPQHLEPEEEPEEELLSEAETPKIKKKKKPKKL
KEPKVPKLSKRQKKELGDSSGEGNEFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKK
NKAKRKEEEEEEEEDDDSKEPKSSAQLLEDWGMEDIDHIFTEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTNVDTV
LPQPPVDVPLRKAKTKEGKGPNARRKPKASPRVPDIKKPKTKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYE
TDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKED
NSEGEEILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNG
EWLCPRCTCPALKGKVQKILIWKWGQPPVGPPPPRPPDADPNAPPPKPLEGRPERQFFVK
WQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKYA
EMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYDL
YKQGYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTL
HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST
IINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFH
VLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQ
NNLEELFHLLXFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNM
PSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFP
VAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFL
EHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDS
DWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSK
TGSMSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVIHYDDKAIERLLDRNQDETED
TELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAARRP
SRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRD
LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQ
EFEHVNGRWSMPELAEIEENKKLSQPSSPSPKTPTPSTPGDTQPNTPAPVPPPEEGVKVE
EGAGAKEQGEPSEPEKELSASATESEVPMEQCVQPVETPPQEAKSPVNPSEADEKKVEEP
EVKERADEPMEVESKADVEKVEDRAPIENPSEPPIITLDEKDEKKDDDKRDVVMLQNGEM
LKESVDERHKKGVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLA
GIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQL
RRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEE
LLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRSSEPPPPPPPQQVAQQQ
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcattggatctccgtcgccgtgctcagggggcagtgatgatgatgagatg
gagatcctgttgaacaacgctatcccccagcatctagagcctgaagaagagcctgaggaa
gagcttctgtcagaggctgagacacccaaaatcaagaagaagaagaagcccaagaaacta
aaggaacccaaagtgcccaagctcagcaagcgtcagaagaaggagctgggagacagctct
ggtgaggggaatgagtttgtggaggaagaagaggaggttctacgttcagacagtgagggc
agcgactacactcctggaaagaagaaaaagaagaaattagggcccaagaaggaaaagaaa
aataaagccaagcgcaaggaggaggaagaagaggaggaagaagatgatgactcaaaggag
ccaaagtcatctgctcagctcctggaagactggggcatggaggatattgatcatatcttc
acagaggaggattaccgcactctcaccaactacaaagctttcagccagtttgtcaggcca
cttattgcagcaaagaaccctaaaatagcagtgtcgaagatgatgatggtactgggagcc
aaatggagggagtttagcacaaacaaccccttcaagggaagttcaggtgcatctgtggca
gctgctgcagcggcagctgttgcagtagtggagagtatggtgaccaatgtggataccgtc
ctgccacagcctcctgtagatgtgccactcaggaaagccaagacaaaggagggcaaagga
cccaatgcccgtcggaagccaaaggccagtcctcgtgttcctgatatcaagaaacctaaa
acaaagaaggtggcacctttgaaaatcaaactgggaggatttggctccaagcgtaaaaga
tcatcgagtgaagatgatgatctggatgtggagtcagacttcgatgatgccagtatcaat
agctactctgtttcagatggatctacaagccgaagtagccgcagtcgcaaaaaactcaaa
gctgggaaaaagaaaaagaaaggtgaggaggactccacagtggctgtggatggctatgag
actgatcaccaggactactgtgaggtgtgccagcagggaggagaaattatattgtgtgat
acctgccctcgtgcctaccacatggtttgcctggacccagacatggagaaagccccggag
ggcaaatggagctgcccacactgtgaaaaagagggcattcagtgggaagcaaaggaggat
aactctgagggtgaggaaatcttggaggatgttgtgggggatgctgaggaagaggatgac
caccatatggagttctgtagagtctgcaaggatggaggagagctgctgtgctgtgatgcc
tgtccttcatcctatcatatccactgtctgaatcccccattgccagagattcccaacgga
gagtggctgtgtcctcgctgcacttgcccagctttgaaaggaaaagtgcagaagatcttg
atctggaaatggggtcagcccccagttggtcccccaccaccacgtccacctgatgcagac
cctaatgctcctccgcctaaacctctggagggccggcctgaaaggcagttctttgttaaa
tggcagggcatgtcctactggcactgttcctgggtgtcagagttgcagctggagctgcac
tgccaggtcatgtttcgtaactaccagcgcaaaaatgatatggatgagccaccctcaggg
gactttggaggggaagaggagaaaagtcgaaagagaaaaaacaaggaccccaaatatgct
gagatggaggagcgcttctatcgctacgggatcaagcctgagtggatgatgatccacagg
atccttaatcatagtgtggataagaaggggaatgtccactatttaattaaatggagggac
ttaccctatgaccaggcctcctgggaaagtgaggatgtggatatccaagactatgacctc
tacaagcaaggctactggaatcatagggagctgatgagaggtgaagagggcagacctggt
aagaagttaaagaaagtgaagatgcggaaactggaaaggccccctgagactcccacagta
gatccaacagtgaaatatgaccggcaaccagagtacctcgatgtaacgggagggacctta
catccctaccaactggaaggactgaactggctgcgcttctcttgggcccagggcacagat
acaatcttggccgatgagatgggtctgggaaagactgtgcagacagccgtgttcctgtat
tccttatacaaagagggccactcaaagggtcccttcttggtgagtgccccactgtccaca
atcatcaactgggaacgagaatttgagatgtgggccccagatatgtatgtagtgacctat
gtcggggacaaagacagccgggccatcatccgtgagaacgaattcacttttgaggataat
gccatacgtggaggcaaaaaagcatccagaatgaagaaggaggctgctgtgaagttccat
gtgcttctcacctcctatgaactgatcacaattgacatggccatactgggctctattgac
tgggcctgtctcattgtggatgaagctcacagactgaagaacaaccagtctaagttcttc
cgggtgctgaatggttactccctccagcacaaactgctgcttacaggaactcccctgcag
aacaacctggaagagctcttccacctgctnnncttcctgacaccagaaagattccataac
ttggagggcttcctagaagagtttgcagatattgccaaggaagaccagatcaagaagctg
catgacatgctgggcccacacatgctgaggcgtctcaaagctgatgttttcaagaatatg
ccgtcaaagactgaactcattgtcagagtggagctgagccccatgcagaagaagtattat
aaatacattttgacaagaaactttgaggcactgaacgcacggggtggtggtaaccaagtc
tccttgctcaacgttgttatggatctgaagaagtgctgtaaccacccctacctcttccct
gtggctgctatggaagctccaaaaatgccaaatggcatgtatgatggtagtgctcttatt
cgagcctctggaaaactgttgctgctgcagaagatgttgaagaaccttaaggagggaggt
cacagggtgctcatattctctcagatgactaaaatgttggaccttctagaagactttttg
gaacatgaagggtacaaatatgagcggattgatggaggaatcacagggaacatgcgtcag
gaggctattgatcgtttcaatgctcctggtgctcagcagttctgctttctgctttctact
cgagctgggggtcttggtattaacttggccacagcagatactgtgattatctatgattca
gactggaacccccacaatgacatccaggccttcagtcgtgcacacagaattggacagaac
aagaaagtgatgatataccgctttgtgacaagggcctcagtggaggagcgtatcactcag
gtggccaagaagaaaatgatgctaactcatctggtagtgagaccagggttgggctccaag
acaggctccatgtccaaacaggaacttgatgacattctcaaatttggcactgaagagctc
ttcaaggatgaggctactgaagggggggataacaaggaaggtgaggacagcagtgtcatc
cactatgatgacaaagcaattgagcgtctgttggatcggaaccaggatgaaacagaagat
acagaacttcaaggcatgaatgagtatctcagctccttcaaagtggcccagtatgtggtt
cgtgaagaggagatgggggaggaagaggaggttgaacgggagatcattaagcaggaggag
tcagtggatcctgattactgggagaaactgctgcgtcaccattatgaacagcaacaggag
gatctggccaggaatctgggcaagggcaaacgtattcgcaagcaagttaactacaacgat
ggctcacaggaggacagagactggcaggatgaccagtcagataatcagtcagactattca
gttgcttctgaagaaggtgacgaggactttgatgagaggtctgaagcagctcgtcggcct
agccgcaaaggcctgagaaacgataaggataagcctctgcctcccttacttgcccgtgtg
ggagggaacattgaggtcttgggtttcaatgcccgccagcggaaagccttcctcaatgct
atcatgcgctatggaatgccacctcaggatgccttcaccactcagtggcttgttcgggac
ctccgtggcaagtcagagaaagagttcaaggcctatgtctcgctgttcatgcgtcattta
tgtgaacctggagctgatggtgcagagacctttgcagatggggtcccacgggaaggtctt
tctcgacagcatgtccttactcgcattggggtcatgtctcttatacgcaaaaaggtgcag
gaatttgagcatgtgaatggccgttggagtatgccagaactggcagagatagaggagaac
aagaaactttcacagccaagctcgccctctcccaaaactccaactccttcaacaccaggg
gatacgcaaccaaatacacctgcccctgtccctccacctgaagaaggagtaaaagtagaa
gaaggagccggtgcaaaggagcaaggagagccatctgagccagagaaagaactcagtgcc
tctgctactgaatcagaggtccctatggagcaatgtgtccagcctgtggagacaccacca
caggaagcaaaatccccggtgaacccctcagaagcagatgaaaaaaaagtagaagaacca
gaggtgaaggaaagagcagatgagccaatggaagtagaaagcaaagctgatgtggagaaa
gtggaagacagagcacctattgagaatccctctgaacctcctataatcactctggatgag
aaagatgagaaaaaggatgatgataagagagatgtggtgatgctgcagaacggagagatg
ctgaaagagtcagtagatgaaaggcacaagaagggagtaaagcagcgcttcatgttcaac
atagcagacggtggcttcactgaactacactccctgtggcagaatgaagagcgagctgca
actgtcacaaagaagacctatgagatctggcatcggcggcatgactactggctccttgct
ggaattatcaatcatggctatgcccgttggcaggatattcagaatgatccacgttacgcc
atcctcaatgaacccttcaagggtgagatgaacaggggtaacttcctggaaataaagaat
aagttcttggcaaggagatttaagctcctggagcaagcgctggtgattgaggagcagttg
cggcgagctgcctatctaaacatgtcagaagacccatctcatccatctatggctctgaac
acacgtttcgcagaggtggaatgcctggctgagagccaccagcacctctccaaggagtca
atggctgggaataaaccagccaacgcggtgctgcacaaagttctgaagcagctggaggag
ctgttgagtgacatgaaggcagatgtgactcgtttgcctgccaccattgcccgtatcccc
cctgtggcagtgcgcctgcagatgtccgagcgcaacatcctcagccggctggccaaccgc
agtagtgagccccctccaccaccccctccccaacaagtggcccagcagcagtga
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integrated database retrieval system