Columba livia (rock pigeon): 102090958
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Entry
102090958 CDS
T02912
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102090958 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102090958 (EXOSC1)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102090958 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102090958 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
102090958
NCBI-ProteinID:
XP_013223931
UniProt:
A0A2I0LJU5
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MAPAQVSCTLRQPLYCPLGERLCSAEEATAGRGTSAGSGTYTRHGFIFSSLAGCLEKRSE
DSGLPVVSVVRDAESQLLPDVGAVVTCKVCSINSRFAKVQILYVGSTPLKSTFRGTIRRE
DIRATEKDKVEVYKSFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVP
ISWCEMQCPRTHTKDFRKVARVQPQFLQT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcccaggtttcctgcaccctgcgccagcctctgtactgtcccttaggcgag
cggctgtgcagtgcggaggaggccacggctggcaggggcacctcggctggcagtggcacc
tacacccggcacggcttcatcttctcctcgctggccggctgcctggagaagaggagcgag
gacagcgggctgcctgttgtgtcggtggtgagagatgccgagtcccaactcctgcccgat
gtgggtgccgtggtgacgtgcaaggtttgcagcattaactcccgctttgccaaggtgcag
atcctgtacgtcggctccacaccgctgaagtccacattccgggggaccatacggagagaa
gatattcgagccacagagaaggataaggtagaagtgtacaagagtttccgccctggtgac
atagtcctggccaaagttatctcgctgggggatgcacagtccaactacctgctgagcaca
gcagagaacgagctaggtgtggtggtggcacgcagtgaggcaggggtgcagatggtgccc
atcagctggtgtgagatgcagtgcccacggacgcacactaaggacttccggaaggtggcc
cgcgtgcagccccagttcctgcagacctag
DBGET
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