Columba livia (rock pigeon): 102091112
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Entry
102091112 CDS
T02912
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102091112 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clv02000
]
102091112 (ABCA4)
Transporters [BR:
clv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102091112 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
102091112
NCBI-ProteinID:
XP_021148408
LinkDB
All DBs
Position
Unknown
AA seq
2333 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRKRQKLRFLVELVWPLTLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFHSPTPGEGPGVVSNYNNSILARVYKDAQELLLAAPEIQ
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLEDAGLPDTVVFQ
LINAQVRPEQFAYGVPSLTLKDIACSQMLLDRFIIFSSRRGLPSVHKAMCALSQESLQRV
EDALYANVDFFKLFQLLPTVLDRNSPGVDLKTWGRVLSNVSQVMQKLARKPSVQNLLMVL
QPFVQHGRPESLGHLVNSLSELLCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSSY
LYDNTTTSFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVRQILKNANSTFEE
LERLRLLTKSWEEIAPQLWYFFQNSLQMNMIRDSLKHPTVRNFLNTQLGAEGFTAEHIIN
FLHNGSPGSREKGMADFDWRNIFRTADQALRLLGQYLECVTLDKFEGYINESQLTHRALH
LLEENKFWAGVVFPDIEPTTSSLPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTNTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGVTNGVIWCTWFLDSFGMMAVSTFLLTVLIM
CGQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
AWQDRMTINLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNVRTSPLEGDEYSFLFSI
RMMLFDAFLYGVLSWYLDNVFPGDYGLPQPWYFPVQESYWLGSRNPKAEKTASADEKSPE
SKGCVDQKALEEEKNESRTKKSEEPEKPEEKTDNQGEKDGKNKQCKHKREKEHGKQGKPQ
TDVQDKDEININTFFEPEPTGLIPGVCIQNLVKIFANRPKPAVDGMSITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLIDGLDIQTHMDSIRHRIGMCPQYNILFNHLTVAEH
ILFYSQLKGRSRDEAEQELEKMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNCFGSGFYLTLVRKMKNTRTGRTTSLCSCGSQCSCSCSSCTRRTKEGAPEQELDG
DLNELAEVIHHHVPEAKLIESIGQELIYLLPNKHFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPGMQKAGDTQENGSTLGKISTENKPSEQTPLEINDTSRMPVG
IAGDQNGGKGSQQYKGFQLVHQQIKALLIKRFHHASRSHKDFLAQIVLPASFVLLSLILT
VIIPPFGQYPALTLHPWIYGQQFTFFSNERPGSEQMASITDAFLNKPGFGNRCMKNQPLP
NYPCNNMPTAWNTPAVQPNLSSLLLSQKWSPENPSPSCKCSTHKKLTMLPECPAGAGGLP
PPQRVQHSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLH
VSGDQVVNFLSDLGRMMNVTGGQNSLAAAKEMSNFLKYMETEDNIKVWFNNKGWHAMVSF
LNVANTAILRANLRTGQAPEEYGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPAIYWLTNFMWDIVNYTLSAGMVVVIFAGFN
KKAYTSPTNLPVLVALLLLYGWAVIPMMYPAASFFNVPSTAYVALSCINLFVGINSSAIT
FILELFENNPSLLKFNKTLKNVLIVFPHFCLGRGLIDLAMNQAVTEVFARFGEEHVSNPF
QWDFVGKNLVAMAVQGVAFFILNLLMQHRLFSTRWFAETAMSPIMDEDEDVAEERKRIIS
GGNKTDILEIKELTKIYAGRHKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTD
VTSGDAVVAGSSILTHISNVHQNMGYCPQFDAVDDLLTGREHLHLYARLRGIPAEEIKRV
AEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLW
DCIVSVLRDGRAVILTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIVTLK
IKAPKPGMRPDPTPAEQFIRMNFPGSLQREKHYNMLQYQICASSLAKIFRLIISNKENLH
IEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREGKVSPALQQQAVA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctttaggcaagtcagacttctactctggaagaactggatcctccggaaaaga
caaaagcttcgttttcttgtggagcttgtatggcctctgacattatttcttgcccttgtc
tggctgaggaaagctaatccattgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatctgcaggaacactgccatggttacatggcatcttctgtaacatgaacaatcca
tgtttccacagcccaacccctggagagggtccaggtgttgtgtccaactacaacaattca
atccttgcaagggtatataaagatgctcaggagctcttactggcagctcctgaaatccaa
gaccttggcagaatctgggaagaactgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattctgaaagatgga
gagaccctcacttccttcttgctggaagatgctggcctcccagatactgttgttttccag
cttatcaatgctcaagtgcgccctgaacagtttgcctatggtgtccctagcttgactctg
aaggacatcgcttgcagtcagatgctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtgcacaaggccatgtgtgccttgtcccaggaaagcctgcagagagta
gaagatgccttgtatgcaaatgttgatttttttaagctatttcagctgcttcccactgtg
ttggacagaaactcaccaggcgttgacctaaagacctgggggagggtgctgtctaatgtc
tctcaagtgatgcaaaagctagccaggaagccgagtgttcagaacctgttgatggtgctg
caaccatttgtacaacacggaaggccagaatccttaggccacttggtgaactcgctatct
gagcttttgtgtggctatccagaaggaggtggatccagagtactttccttcaactggtat
gaagataataactacaaagctttcctggggattgactcaacaaggaagaaatccagttat
ctttatgataatacaaccacatccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacggcaaatacttaaaaatgcaaactctacttttgaggaa
cttgaacgcctcagactgttgacaaaatcttgggaagaaatagcacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaagcaccctacagtg
aggaacttcttgaacacccaactgggtgctgaaggcttcactgctgaacatataatcaac
tttctccacaatgggtcgccagggagccgggagaagggaatggcagactttgactggcgg
aacatcttccgtactgcagatcaagctctgcgtttgctcggccagtatctggagtgcgtg
accctggataaatttgaaggttatattaatgaaagtcaactcactcatcgagcccttcat
ctgctggaggaaaacaaattctgggcaggtgtagtttttccagacattgagcctacaaca
agcagtcttccaccacatgtgaaatacaagatccggatggacatagatgcagtggagaaa
acaaacaaaatcaaggacaggtattgggatcctggtccaagagctgatcctgtggatgac
ttacgttatatctggggaggctttgcatatctccaagacatgattgagcacgggattata
aagacccagaccaacactgaagtgccgttaggaatttatctgcagcaaatgccataccca
tgttttgtggatgacgttttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctagcttggatatattcagtttccatgacggtgaagagtatagtgctggagaaggaaatg
cgcctgaaagaggctatgaagaacaggggtgtaactaatggggtgatctggtgcacttgg
ttcctagacagcttcggcatgatggctgtgagcacattcctcctcacagtgctcattatg
tgtggacaagtactacattatagcaatccacttctcttctttctgttcctcctgaccttc
accacagccaccataatgcagtgtttcttgttcagcacctttttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctatttcaccttgtacctccctcacattgtctgcttt
gcctggcaagaccgcatgactattaatctgaagatcctagcaagtttgctttctcaagta
gcttttggcttcggcacagaatacttgtcacggtatgaagaacaaggtcttggcctacag
tggggtaacgtcagaaccagtcccttggaaggagatgaatatagctttcttttttccatt
agaatgatgctttttgatgcttttctctatggagtactttcttggtaccttgataatgtt
tttccaggggactatggtctaccacagccttggtatttccctgtgcaggaatcttactgg
cttggctctagaaatccaaaagctgagaaaacagcaagtgctgatgaaaaaagtccagag
tcgaaaggctgtgtggatcagaaggccctggaagaggaaaaaaatgaaagcagaacaaag
aaatctgaagaacctgaaaagccagaagaaaagactgacaaccagggggagaaggatggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacacggcaagcaggggaaacctcag
acagatgtccaggacaaagatgaaattaatataaataccttctttgagcctgagccaaca
ggactgattccaggagtatgcattcagaacctggtgaagatttttgccaacaggcccaag
ccagcagtagatgggatgagtattactttttatgagggccagatcacggcctttcttggt
cacaatggagcaggaaagacaaccaccatgtccatactgacaggcctcttcccacccacc
tctggaacagtgctgattgacggcctggatattcagactcacatggactccattcggcac
agaataggcatgtgccctcagtacaacatcttattcaaccaccttactgtagcagagcac
atcttattttattctcaactgaaagggagatccagggatgaagctgagcaagagttggaa
aaaatgctagaagacatgggcctcacccataaaaggaatgaagaggctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagtggta
gtcttggatgagcccacttctggagttgatccatattccaggcgatctatctgggatctt
ctgctgaagtatcgctcaggcagaaccatcatcctctccacacatcacatggatgaggca
gacatccttggagacagagtagccatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactgctttgggtctggcttctatctcactcttgttcgcaaaatg
aaaaacaccagaactggaaggactacatcgctttgtagctgtggatctcagtgctcctgc
tcctgctccagctgtacacgcaggaccaaagaaggagctccagagcaggaactggatgga
gatctgaatgagctagcagaagtaattcatcatcatgtcccagaagcaaaattaattgaa
agcattggtcaggaactcatttaccttttgcccaataaacattttaaacagcgatcttac
gccagtctcttcagagaactggaggaaacattggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgga
atgcaaaaagcaggagacacacaagaaaatggctctactcttggcaaaatttctactgag
aacaaaccatctgaacaaaccccactggaaattaatgacacttctcgaatgccagtaggc
atagcaggagatcaaaatggaggcaaagggtcccaacagtataaaggttttcagcttgta
catcagcagatcaaagcactgctcatcaaacggttccaccatgcctcccgcagccacaag
gacttcctagcccagattgttctccctgctagttttgtgttgctatctttaatacttaca
gtcattattcctccatttggacaatatcctgccttaaccttacacccttggatctatgga
caacagtttactttcttcagcaatgagcgtcccggcagtgagcagatggcctccatcact
gatgctttcttgaataaaccaggatttggaaatcgctgcatgaagaatcagcctcttccg
aactacccatgcaataatatgccaactgcctggaacacccctgctgttcagcctaaccta
agcagcctcctgctgagccaaaagtggagccctgagaatccttcaccttcctgcaagtgc
agtactcacaagaaactcactatgctgccagaatgccctgcaggcgcgggaggcctccca
ccgccacagagagtgcagcacagcacagaaattcttcaagatctgacccacagaaatatt
tcagattttctggtgaaaacatatcccactttgataaaagggagcttgaagagcaaatat
tgggtcaatgagcaaagatacggaggcatttctataggaggaaggctcccggtccttcat
gtttctggagatcaagttgtcaattttttaagtgatcttggccgaatgatgaatgtgaca
ggagggcaaaattcactggctgctgctaaagaaatgtctaatttcctcaaatacatggaa
actgaagataatattaaggtgtggtttaacaataaaggctggcatgctatggttagtttc
cttaatgtagcaaatactgcaatccttagagctaacctgcggactggccaagcccctgag
gaatatgggatcactgctatcaaccatcctctgaacctcaccaaggagcaactctctgaa
gtcactgtgcttaccacttctgtggatgcagttgttgccatctgtgtgatttttgccatg
tcctttataccggctagttttgttttatacctgattcaagaacgtgtaacaaaagccaag
catctgcagtttgtcagtggtgtgagccctgcgatctactggctaactaacttcatgtgg
gacatagtgaattatacactgagtgctggaatggttgtggttatattcgctggattcaac
aagaaagcctacacttctccgactaatctccctgtgcttgttgccttgctgcttctgtat
ggatgggcagtaattcccatgatgtaccctgctgcttctttcttcaatgttcctagcact
gcttatgttgcattatcttgtattaatctctttgtggggatcaacagcagcgccattact
ttcatcctagagttatttgaaaataacccgtctttgctgaagtttaataaaacattgaaa
aacgtgttgattgtcttcccacatttttgcctgggccgtggactcattgacttggccatg
aaccaagctgtcactgaagtatttgccaggtttggtgaggaacatgtttccaatcctttt
cagtgggactttgttggaaagaacctggttgccatggctgttcaaggggttgcattcttc
attctgaatctccttatgcagcaccgtttgttctccacaagatggtttgctgagactgcc
atgtcacctattatggatgaagacgaggatgttgcagaagaaagaaaaaggattattagt
ggagggaacaaaacagatatcttagaaataaaagagctgaccaagatttatgcaggtagg
cacaagcctgcagtggacagactctgtgttggcatccgtcccggagagtgctttggtctt
ttgggagtgaatggtgctggcaaaacaacaacattcaaaatgctgactggagatactgat
gtgacatctggagatgctgtagtggctggtagtagtatattgacccacatttctaatgta
catcaaaacatgggatactgccctcagtttgacgccgttgatgacctgctcacaggacga
gaacacctccacttatatgcacgcctgcgggggattccagcagaggagatcaagagggtt
gcagaatggggcatccagaagctgggacttcctatgtatgcagaccatctggctggtacc
tacagtggtggcaacaagcgcaagctctccactgccattgcactgataggctgcccacca
cttgtcttgctagatgaaccgactactggaatggaccctcagtcccggcgcctcctgtgg
gactgtattgtcagtgtgctcagagatgggcgagctgtgattctaacctcacacagtatg
gaagaatgtgaagccctttgtacccgtttagccatcatggtaaaaggtaccttcaaatgc
ctgggcacaattcagcagctaaaatacaagtttggagatggctacattgtcaccctgaaa
atcaaagctccaaagcctggaatgcgtccagatcctactcctgctgagcagttcatacgc
atgaacttcccagggagtttacagagagaaaaacactacaacatgctgcagtatcagatt
tgcgcctcctctctggctaagatttttcggttaataatctccaataaggaaaacttgcat
attgaagaatattctgtgtctcaaacaactttagatcaggtttttgtgaattttgctaaa
cagcagatggaggatgaggaaattcctttgcatccccgtgcagctggggccagccgagaa
ggcaaggtgtctcctgctttgcaacagcaggcagttgcgtag
DBGET
integrated database retrieval system
