Columba livia (rock pigeon): 102091157
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Entry
102091157 CDS
T02912
Symbol
SNAPC4
Name
(RefSeq) LOW QUALITY PROTEIN: snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102091157 (SNAPC4)
03021 Transcription machinery [BR:
clv03021
]
102091157 (SNAPC4)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
102091157 (SNAPC4)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
102091157 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Glyoxalase_8
SLIDE
Motif
Other DBs
NCBI-GeneID:
102091157
NCBI-ProteinID:
XP_021135738
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MEVEGEADSSDDDLESSLPQDPETCLQMNHVYQEVIQEKIEEVELLIAQNKEQQKEIMCE
LGGPKMAKARDGRNLPANVFLGHFMKPYFKDKTTGIGPPSNEDAKEKAAQGIKSFEQLIS
TKWKSKEKTLLQQSIASDRLQRLLQPKLLKMSYWNQKLDKVKTEMEKQILEKQIKEVEQE
IEAINQLPESELLGNRFDEHDWEKISNIHFDGQRSSEELRRFWQNSEHPSINKKEWTEEE
IERLKQIAAKHGYLDWQTIAQELGNNTNKFGTLSVSSCLHKXPVIHISLFSLYXLVQEMR
VGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKKGPWTSREDAMLLAAVKKYGERDWY
KIRTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEGQLIELVQKHGLGHWSKIASQLPH
RTGSQCLSKWKLMIGSKKKSRPTKRRHVEESSSSSESSSEDVELDLTDSSEEETTKEEET
KKKEERAIPSIDLWIPTQTNTQESNKGRYQTPSLFPPVSEVPSAIGDKGKVADKPSELNT
LLRGIARPYSTDVVVRNPEEIMNKAFRCGKQVLRVSLENVRRALRNNTCFQRRILAKMLK
SPTALTKKSGDSTSGQKVQGLQNITEKTYRQERGRLRRLNLDRRLLMAVTPWVGDVLLPC
TFQTGHMGFHQTKAESIQEKIKSVSLASTPLFTLFLQLFQIDTNGCMKIIRERRQRQAEL
LSANAGSPQQPSQNTETSSGNPSQSWTQSNSQRGVPRNVVRRPVVSKLKETSAALASCAP
AAQGVLPAQGQRQKPKTVSELLREKRLRESQAKKAMQRTVFVAPQMLVSRPLIIQHPQQQ
IVPSAQAGNKPAAAGSTNGQVQCAPAPLPAFTSVAASTSTTIVLGNHSSSVPETGESPGS
SQGTELQSSKELKEQALESSPEGGFFPGLNPAAAEKAPDPGGSNGQVLAGSSASVVLQKQ
VFVPHQITVVPVGIESGASNLSLSTPVACELNSDGPQQRPVSLLPALVTPQTASHLLPKS
ILPFTWVVTPQALLPTAVQTVVSVPQGLPAPAVTNQGQTTVTSSSNGSVSGVPPVPAAAN
TPQPSSAETKAPSARLAGEAPLGKTANHSTVVPVTAESAGCTTSSVSSATPACSDGSSKA
SDSSPAQTALPAGAPALRAVLLPQTQPPANTQGPDSQPVSSLSSSGKSHDSITTNGSSSS
PNVIPKGLVLPTGNPVPCNDIPGNTGGFAAQALKNTPVASEPPATQAADTPPQPTTSSAE
KNLLDFSLISLEDEGVVKEWLSGKRGVQVPSLQTRLPYLPPFLCNLKTLSRLLLQKAALE
EQAASLLPSDTGQDGGTGVDLDAIGELVQRELGXXXXXXXXXXXXXXXXXLATLPPPKVI
TTLSGSRKQYEESDEEEWQSEKEASEEESCGNELTGVRLGGTVADEPGDKDADALNQDAG
AGGIAAQSVWDSGTDVADAPQIRRSTRFRKRRRI
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaaggagaagctgacagtagtgacgatgaccttgaaagcagtctgccacag
gatccagaaacctgtctgcagatgaaccatgtgtaccaggaagttatccaggaaaagatt
gaggaagtcgagcttctcattgctcaaaacaaagaacagcagaaggagatcatgtgcgag
cttggtggtccaaaaatggcaaaggcaagagacggtagaaatctaccagcaaatgtattt
ttgggtcactttatgaagccatacttcaaggataaaacaacaggaattggccctccttcc
aatgaagatgccaaggaaaaggcagctcagggcataaaatcctttgaacaactcatttca
acaaaatggaagagcaaagagaagacgttattgcagcaatcaatagcaagcgaccgcttg
cagcgcctgcttcagccgaagctactgaagatgagttactggaatcagaaactggataaa
gtcaagactgaaatggagaaacagatcttggaaaagcaaatcaaagaagtggagcaagaa
atagaggcaattaaccaactcccagaaagtgaattgttaggaaacagatttgatgagcat
gactgggagaaaatctcaaacatccattttgacggacaacgtagttcagaagaactgagg
aggttttggcaaaattcggagcatccaagcatcaacaaaaaggaatggaccgaggaggag
attgagaggctgaagcagatcgctgctaagcacggttatctggactggcagaccatagcc
caggagctggggaacaataccaacaagtttggtactctatccgtttcttcttgccttcat
aaataaccggttatccacatatctctcttttcattgtattagcttgttcaagagatgaga
gtgggaagtcatatcccgtacaagaaaattgcttattacatggaaggaagagattcagct
cagctgatttaccggtggacaaagagcgtggaccccagtttgaagaaaggaccctggaca
tcaagggaagatgctatgttgttggctgcagttaagaagtatggagagcgtgactggtac
aaaattcggacagaagtgccagggaggagcgatgctcagtgcagagatcggtacttaaaa
gcattgcactgtgatgtcaagaaaggcaagtggagtttagaggaagaggggcagctaatt
gaactggttcaaaagcatggcctgggtcactggagtaaaatcgcttctcagttgccacat
cggactggctcccaatgtctgagcaagtggaaactcatgattgggtctaagaaaaaatct
aggccaacaaaacgccgacatgtggaagagagttccagctcttcagagagcagcagtgag
gacgtagaactggacttaacagacagttcagaggaggagacgacgaaggaggaggaaacg
aagaagaaggaggagcgtgcaattcccagcattgatctgtggataccaacacagacaaac
acacaggagtcaaacaagggaagataccaaactccatcccttttccctcctgtgagtgaa
gttccaagtgcaataggagacaagggcaaagttgccgataaaccgtcagagttgaacacc
ctcctgaggggcatcgcccgtccctattcgacagacgtcgttgtgaggaatccagaagaa
atcatgaacaaggctttcaggtgtggaaagcaagtgctacgggttagcctggagaatgtg
agaagagcattaagaaataacacatgcttccagaggaggattctggccaagatgctaaaa
tctcccaccgctttaacaaaaaagtctggagatagtacatctggccagaaggttcaaggg
ctgcagaacatcacagagaaaacttatcgtcaagagagagggcgtttaagaagattaaac
cttgacagaaggcttctcatggcagtgacaccgtgggtgggcgacgtactgctgccgtgc
accttccagactgggcacatgggttttcatcagacaaaagctgagtctattcaagagaag
attaagtcggtcagtcttgcaagcactcccctgttcacgcttttccttcagctcttccag
atcgataccaatggctgcatgaagattattcgtgagagaaggcaaaggcaggcagagctg
ctcagtgctaatgcagggagcccccagcagccttcccaaaatacggagacttcttcaggc
aatccatcacagtcgtggactcagagcaactcccaaaggggcgtcccaaggaacgttgtc
aggagacccgttgtctcaaaactgaaggagaccagtgctgccttggcgagctgcgctcct
gccgcacagggggtgcttccagcccaagggcaaaggcagaagcctaaaactgtctcggaa
ttactgagggagaagcggctaagagaatcccaggctaagaaagctatgcaaaggacagtg
tttgttgccccacagatgttggtttccagaccactgataatccagcacccacaacagcaa
attgttccttctgcgcaagcagggaacaaacctgcagcagctggttctacgaatggccaa
gtacagtgtgcaccagctccattgccagcgtttacttctgttgcggcttcaacttctacc
actatcgtgcttggaaaccattcctcatcagtgccagaaactggggaaagccctggatcc
tcacaagggacagaactgcaatccagtaaggaactaaaagagcaagctttagaaagcagc
cccgagggagggttttttccaggcttgaatccagctgcagcagagaaggccccagatccg
ggagggagcaatggtcaggtcctggctggtagctcagcttcagtagtgttgcaaaagcaa
gtttttgtgccacatcagataacagtggtgcctgttggcattgagtctggcgccagcaat
ttgtctctttccacaccagttgcctgtgagctgaacagtgatgggccccagcagaggcca
gtcagtctcttgcctgctcttgtaactccacaaactgcttcgcatttgcttcccaagagc
atcctgccgttcacatgggttgtgacgccacaggctttgctccccaccgctgtacaaacc
gtggtgagtgttccccaaggactgccagctcctgctgtaacaaatcagggtcagacaact
gtgacttccagcagcaacggctctgtctcaggggtgcctcctgtaccagcggcagctaac
acgcctcagcccagcagtgcagagacaaaagcaccgagtgcccggttagccggagaagca
cctttgggcaagacagccaaccattccaccgttgtacccgtgaccgcggagagtgctgga
tgcaccacatccagcgtttcttctgcaacacctgcatgttcagatggctcctccaaggct
tctgactcctccccggctcagactgctcttccagctggtgctccagccctgcgtgctgtg
ctgctgcctcaaacacagccgcctgcaaacactcaagggcctgattcccaacctgtgtcg
agtctttctagctcgggaaagagccatgactccattacaacaaatggatcatcttccagt
ccaaatgtcatcccaaaagggcttgtgctcccgacgggaaatccagttccttgtaacgat
attccaggaaacactggtggttttgctgcacaagcactgaaaaatacacctgttgcctcc
gaaccacccgctacacaggcagctgacaccccaccccagccaaccacgtccagtgcggaa
aagaacctgcttgacttcagcctgatttccctcgaagatgagggggtggtgaaggagtgg
ctgagtgggaaacgaggtgtccaggtgccatccctgcaaaccaggttgccttatttgcca
ccttttctgtgcaacttaaaaaccctctccaggctacttctgcagaaagcagctctagaa
gagcaagccgcctctcttctgccttctgatactggtcaggatgggggcactggggtagat
ttggatgctatcggagaactggtgcagcgggaacttggnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggcaactctgcctcctccaaaagtgata
acaactctgtcaggcagcaggaagcaatatgaagagagtgatgaagaggagtggcagagt
gagaaggaagcgtctgaggaagaaagctgtgggaatgagttaacaggtgtgcggctgggt
gggacggttgctgatgagcctggagacaaagatgctgatgcactaaatcaggacgcggga
gctggagggattgctgcacaatctgtctgggactccggcaccgatgtggctgatgctcct
caaatcaggagaagcacccgcttcaggaaaaggaggaggatatga
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integrated database retrieval system
