KEGG   Columba livia (rock pigeon): 102091178
Entry
102091178         CDS       T02912                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
clv  Columba livia (rock pigeon)
Pathway
clv04510  Focal adhesion
clv04512  ECM-receptor interaction
clv04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102091178 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102091178 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102091178 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:clv00535]
    102091178 (COL9A3)
Proteoglycans [BR:clv00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   102091178 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102091178
NCBI-ProteinID: XP_005499645
UniProt: A0A2I0M5W7
LinkDB
Position
Unknown
AA seq 675 aa
MAGFSALGLLFLCQLLATASAQRIGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGPAGKGLPGPPG
PPGPSGLPGGNGFRGPPGPFGLPGFPGPPGPPGPPGLPGALPDGGGDLQCPALCPPGPPG
PPGMPGFKGHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAG
DRGDIGFRGPPGIPGPPGKAGIQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPG
KDGRDGAPGLDGEKGDAARMGAPGEKGPNGLPGLPGRAGVKGSKGEPGSPGEMGEAGPSG
EPGIPGDVGIPGERGLPGPRGATGPLGLQGPTGAPGVRGFQGPKGASGEPGLPGPTGIRG
ELGDRGPTGVPGPKGNQGIAGADGLPGNKGELGPFGPPGQKGEPGKRGELGPKGVQGPNG
TAGVPGIPGLPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANL
RKPLSPGMTGRPGPAGPPGPPGATGSIGHPGPRGPPGYRGPTGELGDPGPRGDTGEKGDK
GPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGAPGAIGAQGTPGICDT
SACMGAVGASTSKKS
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggctggattctccgctcttgggcttctcttcctgtgccagctcttggccacggcatca
gctcagagaataggaccacaaggccctcctggaccacgaggaccgcctggaccatctggc
aaggacggcatagatggagaaccaggccctcctggtttgccaggcccgccagggccaaaa
ggtgcaccagggaagcctggagcagctggtgaagctggattgcctggccttcctggagtg
gatggtttaacaggaaccgatggcccacctggcccaaatgggcctccaggagaccgtggt
gcgttaggacctgccgggccacctggaccagctggcaaaggactaccaggacctccaggg
cctccaggacccagtgggctcccaggtggaaatggatttcggggtcctcctgggcctttt
ggtctgccaggattcccagggcctcctggaccacctggacctcctggacttccaggcgcc
cttcctgatggcggtggggaccttcagtgcccagcgctgtgcccaccgggtcccccaggt
cccccgggaatgccaggcttcaagggacacactggtcacaaaggagaacctggcgaaata
ggaaaagaaggagagaagggtaaccctggccctcccggccctccaggcattcccggcagc
gttggcctgcagggcccaagaggactaagaggtctccctggtccaatgggtccagccggt
gacagaggtgacattggtttccgagggccacctggaatccctggacctccagggaaagcc
ggaatccaaggaaacaaaggacctcaaggattcagggggcccaaaggtgatactggtaga
cctggaccgaaaggaaacccaggggctcgtggactcataggagagcctggcatgcctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaagggaccaaacggactgcccggactgcctggaagagcaggtgtt
aaaggctcaaagggtgaaccaggcagccctggggagatgggagaggccggtccctctgga
gagcccggcatccctggcgatgttgggattcctggtgagaggggtctgccgggacccaga
ggagcgaccggaccgcttggtcttcaaggcccgacgggagcccctggtgtcagaggtttc
cagggtcccaaaggtgccagcggggagcccggcctccctggtcccactggaattcgtggc
gagttgggtgacaggggtcctaccggtgttcctggtcctaaaggtaaccagggcattgct
ggagcagatggcctcccaggcaacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtcctaaaggtgtccaaggacctaatggc
acagctggagtaccagggatcccaggactccccgggcccatgggccaccagggagaacaa
ggtgttcccggcatcacaggaaaacctgggcccccgggcaaagaggccagcgaacaacat
ataagagaactctgtggggaaatgataaatgatcaaattgcacagttggctgctaacctg
agaaagcccttgtctcctggaatgacgggtcgtcctggtccagcgggtcccccgggtcct
cccggagctacggggagcatcgggcaccctggtcctcgcggtccccccgggtaccgaggg
ccaacgggagaactcggtgatcctggtccccgaggtgacactggcgaaaagggagataaa
ggacctgttggtcaaggtatcgatgggcctgacggcgatcaaggacttcaaggaccaccc
ggtgtacctggaattactaaaaacggccgtgatggtgctcagggtgaacctggtctgccg
ggggatcccggtgctcccggtgctattggggctcagggaactcctggaatatgtgacaca
tcggcttgtatgggagctgtgggagcatcgacctccaaaaaatcataa

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