Columba livia (rock pigeon): 102091178
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Entry
102091178 CDS
T02912
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04510
Focal adhesion
clv04512
ECM-receptor interaction
clv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102091178 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102091178 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102091178 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
clv00535
]
102091178 (COL9A3)
Proteoglycans [BR:
clv00535
]
Extracellular matrix (ECM) proteoglycans
Others
102091178 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102091178
NCBI-ProteinID:
XP_005499645
UniProt:
A0A2I0M5W7
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MAGFSALGLLFLCQLLATASAQRIGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGPAGKGLPGPPG
PPGPSGLPGGNGFRGPPGPFGLPGFPGPPGPPGPPGLPGALPDGGGDLQCPALCPPGPPG
PPGMPGFKGHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAG
DRGDIGFRGPPGIPGPPGKAGIQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPG
KDGRDGAPGLDGEKGDAARMGAPGEKGPNGLPGLPGRAGVKGSKGEPGSPGEMGEAGPSG
EPGIPGDVGIPGERGLPGPRGATGPLGLQGPTGAPGVRGFQGPKGASGEPGLPGPTGIRG
ELGDRGPTGVPGPKGNQGIAGADGLPGNKGELGPFGPPGQKGEPGKRGELGPKGVQGPNG
TAGVPGIPGLPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANL
RKPLSPGMTGRPGPAGPPGPPGATGSIGHPGPRGPPGYRGPTGELGDPGPRGDTGEKGDK
GPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGAPGAIGAQGTPGICDT
SACMGAVGASTSKKS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctccgctcttgggcttctcttcctgtgccagctcttggccacggcatca
gctcagagaataggaccacaaggccctcctggaccacgaggaccgcctggaccatctggc
aaggacggcatagatggagaaccaggccctcctggtttgccaggcccgccagggccaaaa
ggtgcaccagggaagcctggagcagctggtgaagctggattgcctggccttcctggagtg
gatggtttaacaggaaccgatggcccacctggcccaaatgggcctccaggagaccgtggt
gcgttaggacctgccgggccacctggaccagctggcaaaggactaccaggacctccaggg
cctccaggacccagtgggctcccaggtggaaatggatttcggggtcctcctgggcctttt
ggtctgccaggattcccagggcctcctggaccacctggacctcctggacttccaggcgcc
cttcctgatggcggtggggaccttcagtgcccagcgctgtgcccaccgggtcccccaggt
cccccgggaatgccaggcttcaagggacacactggtcacaaaggagaacctggcgaaata
ggaaaagaaggagagaagggtaaccctggccctcccggccctccaggcattcccggcagc
gttggcctgcagggcccaagaggactaagaggtctccctggtccaatgggtccagccggt
gacagaggtgacattggtttccgagggccacctggaatccctggacctccagggaaagcc
ggaatccaaggaaacaaaggacctcaaggattcagggggcccaaaggtgatactggtaga
cctggaccgaaaggaaacccaggggctcgtggactcataggagagcctggcatgcctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaagggaccaaacggactgcccggactgcctggaagagcaggtgtt
aaaggctcaaagggtgaaccaggcagccctggggagatgggagaggccggtccctctgga
gagcccggcatccctggcgatgttgggattcctggtgagaggggtctgccgggacccaga
ggagcgaccggaccgcttggtcttcaaggcccgacgggagcccctggtgtcagaggtttc
cagggtcccaaaggtgccagcggggagcccggcctccctggtcccactggaattcgtggc
gagttgggtgacaggggtcctaccggtgttcctggtcctaaaggtaaccagggcattgct
ggagcagatggcctcccaggcaacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtcctaaaggtgtccaaggacctaatggc
acagctggagtaccagggatcccaggactccccgggcccatgggccaccagggagaacaa
ggtgttcccggcatcacaggaaaacctgggcccccgggcaaagaggccagcgaacaacat
ataagagaactctgtggggaaatgataaatgatcaaattgcacagttggctgctaacctg
agaaagcccttgtctcctggaatgacgggtcgtcctggtccagcgggtcccccgggtcct
cccggagctacggggagcatcgggcaccctggtcctcgcggtccccccgggtaccgaggg
ccaacgggagaactcggtgatcctggtccccgaggtgacactggcgaaaagggagataaa
ggacctgttggtcaaggtatcgatgggcctgacggcgatcaaggacttcaaggaccaccc
ggtgtacctggaattactaaaaacggccgtgatggtgctcagggtgaacctggtctgccg
ggggatcccggtgctcccggtgctattggggctcagggaactcctggaatatgtgacaca
tcggcttgtatgggagctgtgggagcatcgacctccaaaaaatcataa
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