Columba livia (rock pigeon): 102091445
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Entry
102091445 CDS
T02912
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102091445 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102091445 (MSH2)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102091445 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
MutS_I
Motif
Other DBs
NCBI-GeneID:
102091445
NCBI-ProteinID:
XP_021151088
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQFEEVLFANNDMS
SAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLP
GGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEEQINSAALPEME
KQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVENANT
AQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLR
RFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITPLND
IFSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEKMQSYLKSAAKE
LGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSVNDE
YIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRP
VILDKGQGRIVLKGARHPCVEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQT
GVIVLMAQIGCFVPCESAEVTIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASEN
SLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHV
TALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKE
SDGEPPAKKFYREREEGEKIIQEFLCQVKALPLTDMSEEDIKMKLKELRSDVLAKNNSFV
NEIISRTKVTS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaatcttttgtgagagatctgcttctggttcgtcattacagagttgaagtt
tacaagaacaaagcagggagtaaatctatcaaagaaaatgactggtatttagcatacaag
ggttctccaggaaatctcgcccagtttgaggaagttctctttgccaacaatgatatgtca
tcggccattggggttgtgggggttaaactgtctactactgatggacaaagagttgtagga
gtgggatatgttgacactacgctgagaaaactgagcgtctgtgagtttccagataacgat
cagttctcaaaccttgaagctctgctggttcaactaggaccgaaggaatgtgtactacca
ggaggagagactgcaggagagatgggaaaactacgacaagtcattcagcgaggaggaatc
ctaattacagacaggaagaaggcggatttcacaactaaagatattgttcaggatctcaat
cgcttgttgaaatcaaaaaaagaagaacaaatcaacagtgcagcattgccagagatggaa
aaacaggttgctgtttcatctttgtcagccattatcaagtttttagaattgctgtcagat
gagtctaattttggacaatttgaactgactacttttgatcttagtcaatatatggttcta
gataacgcagctgttcaagccctcaaccttttccagagttctgtggaaaatgctaacact
gcacagtctctagctggtttactaaataaatgcagaacccctcaaggacagagactagtg
aatcagtggatcaaacaaccgcttatggacaaaaatagaattgaagaaaggttgaatttg
gttgaagcttttgtggtggatccagaactacgtcagtgccttcaagaagacctcttgcgt
cgcttcccagatcttaaccgcctggcaaagaaatttcagagacaagcagcaaccttacag
gactgctaccgaatgtatcaagctattaatcagctgcctaatgttgtacaagcactagaa
aaacatgaaggagctcaccagatgttgttgttggcagtatttataacacctcttaatgat
atcttctctgacttctcaaagtttctggagatgatagaaacaacattggacatggataag
gtggaaaatcatgaatttcttgtcaaggcttcttttgatcctaacttgacagaattaaga
gagaaaatgaatgaactggaagaaaaaatgcagtcctatttaaagagtgcagccaaagaa
ctaggtttggaagctggcaagagtatcaaactggagactaattcacagtttggacaccac
ttcagaataacctgcaaggaggaaaaagttctccgtaacaattcaaaatatggaatagtt
gatacacagaagaacggtgttaaatttactaacagcaaactgagctccgtcaatgatgaa
tatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaaggaaatcatt
aacattgcttcaggttatgcagaaccaatacagacaatgaatgatgtgatagctcagtta
gatgcaattgtcagtttcgctcacgtgtcaaatggagcaccagtgccatacgtccgtcct
gtcattctggacaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgcgtc
gaagtgcaggatgaggtggccttcatccccaatgacgttacatttgagaagggcaagcag
atgttccacattattactggtcctaacatgggaggaaagtcaacatacatccgccagaca
ggtgtgattgttcttatggcccaaattgggtgttttgtgccatgtgagtctgcagaagtc
accattgtggattgtatcctggctcgcgttggggctggagacagtcagctgaaaggtgtc
tctactttcatggctgaaatgttagaaacggcttcaattcttaggacagcatctgaaaac
tccctgataatcatcgatgagctgggaagaggaacttctacctatgatggctttggctta
gcatgggctatttcagaatacattgctagcaaaatctgtgctttctgtatgtttgctaca
cattttcatgaactgacagctcttgctgaccaagtgccaaccgtaaataacctacatgtt
actgctctgaccagtgatgacacactgacgatgctttatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacacgtagcagagttggcggctttcccaaaacatgtgatagaa
agtgcaagagagaaagcactggagctggaggaatttcaaaacattggcaagtccaaggaa
tctgacggagagccaccagccaagaaattctacagagaaagagaggaaggagaaaagata
attcaggaatttctttgtcaagtgaaagcattgcctctgacagatatgtcagaagaagac
atcaaaatgaagctgaaagagttgagaagtgatgtgttggcaaagaacaacagttttgtg
aatgaaataatctcccgaacgaaagttacatcgtga
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