Columba livia (rock pigeon): 102091544
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Entry
102091544 CDS
T02912
Symbol
PDZRN3
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102091544 (PDZRN3)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102091544 (PDZRN3)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102091544 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102091544
NCBI-ProteinID:
XP_021142601
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTK
GFTPHESQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDY
MGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDG
RLREGDRIIQINGIEVQNREEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLDD
LHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDE
SSEQENNADDHTTSSNTLGSEKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDE
CERFRELLELKCQVKSANPYSLYYHNSTLDMSKSDQESVDRELEMLNEELRHIELECLNI
VRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGE
SCRSTPLTLEMSPDNSLRRTAEGINCQGNEGAAAYGVSQNNLFASSEGHESSTSKSHASA
KDPDLGKQLESKERRASDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQL
IQQKSAVEYAQSQMSLVSMCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERA
IKIKEERSGMTTDDDAISEMKMGRYWXVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEM
NIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaagaagaacagtacaagttactgtatgaa
gtttgtcaggtcaatgggaaggatttatctaaagcaacccacgagcaggcagtggaagca
ttcaaaacagccaaggagcccattgtggtgcaggtcctgagaagaaccccacgcaccaag
ggcttcactcctcacgagtctcagctggtcgatgtgggcacacagacagacatcactttc
gaacacatcatggctctgagcaagatgggctcccctactccccccgtctccgtgctagac
ccatacctcctgcccgaagaccatccatcagtgcatgaatactatgacccaaatgactac
atgggaggaattcatcaagaaatggaccgagatgagttggaattagaggaagtagactta
catagagtgaacagccaggacaagcttggccttactgtatgttacagaacagatgatgaa
gatgacatgggtatttatgtgagtgagattgatcccaacagtattgctgcaaaagacggc
cgactccgagaaggggatcgcattattcagatcaatggcatagaggtacagaaccgagaa
gaagctgtggcactgctcaccagtgaagagagcaagaatatctccctacttgttgcaaga
ccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctggatgac
ttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgccagcatg
cttcagcagaagaagcatgaggaggatggtggtaccacagatacagccactattttatct
aaccagcacgagaaggacagtggcgtggggcgcacagacgacagcacccggaacgatgag
agctccgagcaggaaaacaacgcggacgatcacaccacctcctccaacaccttagggagt
gagaagaagctgacgtacagtcatgacaccctgggaagtggcgatatgcagttcagcaat
gaatcatttatctcagccgactgcacagatgtcgacttccttggcatccccgtagacgaa
tgtgagcgattccgggaactgctggaactgaagtgccaggtgaaatctgccaacccttac
agtctgtattatcataacagcactctggatatgagcaaaagcgaccaagaaagtgttgac
agagagctggagatgctgaacgaggagctgcgccatatcgagctagagtgtctgaatatt
gtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccttggatgctgcat
aacagcgggttccgcaactataacacaagcatcgatgttcgcagacacgagctctcagac
attacggagctccctgagaagtctgacaaggacagctcgagcgcatacaacacaggcgag
agctgccgcagcacgccgctcacgctggagatgtcccctgacaattcgctgcgcagaact
gcagaaggcattaactgtcagggtaacgagggggcagcagcatatggcgtctcccaaaat
aatttatttgctagctcagaaggtcatgaatccagcactagtaaatcccatgcctctgct
aaagatcccgaccttggcaagcagctggaaagcaaggagagaagagccagtgatggaagc
aaaagccctactcatggtcaaaaaccttctggctcttacgtctccccataccatcactct
ccatataagcatgctcatattcctgcccatgcacagcactatcagagctacatgcagctg
atccaacagaaatcagcagtggaatacgcacagagccagatgagtctggtgagtatgtgc
aaagacttcaattcaagccagagcgaaccgaggatggagtggaaagtcaaggtgagaagc
gacgggacccgctacatcacaaagaggccagtcagggacaggctgctgagagaacgtgcc
ataaagattaaggaggagcgcagtggtatgacgacggatgatgatgccataagtgaaatg
aagatgggccgttactggnaggtgaaagcgaaggagcagaggaggaggcgcgagttcatg
atgcagagcaggttagattgcttaaaggaacagcagggtgcagaagaaaagaaagagatg
aatatcattgaactgagccacaaaaaaatgatgaagaagaggaataaaaaaatatttgac
aattggatgacaatccaagaactgctaacccatggaacaaagtcaccagatggcacacgg
gtgtacaattccttcctgtcagtaactactgtataa
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