Columba livia (rock pigeon): 102091875
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Entry
102091875 CDS
T02912
Symbol
SOX13
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102091875 (SOX13)
Transcription factors [BR:
clv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102091875 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
102091875
NCBI-ProteinID:
XP_005510389
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MSMRSPVSPALELDGAGSMVNCTIKTEEKKESGYESKNPRRAPPPGRPPRGGTAPPPLPQ
ESHSPAGDAREPRHSAFEPAGSGQEKLDFNKNLKEVMPTIEKLLSSDWKERLLGRNTAES
KEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQ
EQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVPPDSQLALPIQPIP
CKPVDYPVQLLHSPPPPTLKRPTGSGHLQMQETSQPLNLTAKPKSSDLPSASSSPSLKMS
GCQSLTPSHGATRDLQSSPSNLPLGFLGEGDAITKAIQDARQLLHGHSGALEGSLSNSYR
KDHVGIDSSPGKERMEETPVHRLDEALLTCEMDGSRHFPESRNNNHIKRPMNAFMVWAKD
ERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRP
KRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQLPPGSSDVLYPRAVGMPLAAP
XGGARAAEPAMPVIVNTRSLKEGDGGDDGHLVADGEMYRYSEEEDSEGEDKSDGELVVLT
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccgtttctcccgcgctggagctggatggagcgggcagcatggtg
aactgcaccatcaagacggaggagaagaaggagagcggctacgagtcaaaaaacccgcgc
cgcgcgccccccccgggccggccgccgcgggggggcacggcccccccacccctgccgcag
gagtcccactcacccgctggtgatgcgcgggagccccggcactctgccttcgagccggcc
ggcagtggccaggagaagctggacttcaacaagaacttgaaggaggtgatgccaaccatc
gagaagttactgtccagcgactggaaggagcggctgctgggccggaacactgctgagtcc
aaggaagtgaaaggaacccaggagagcctggcagagaaggagctccagttactggtcatg
atcaaccagctgtccacgctgcgggaccagctgctgacggcgcactcggagcagaagaac
atggccgcgatgctcttcgagaagcagcagcagcagatggagctggcgcggcagcagcag
gagcagattgccaagcagcagcagcagctcatccagcagcagcacaaaatcaacctgctc
cagcagcagatccagcaggtcaacatgccctacgtgatgattcccgccttcacccccagc
caccagcctctcccagtccctcctgactcccagttagcgctgcccatccagcccatcccc
tgcaaaccagtggattacccggtacagctgctgcacagcccccctcctcccacgctgaag
agacccaccggctcgggccacctccagatgcaggagacatcgcagccgctgaacctgacg
gccaaacccaagagttctgacctccccagcgcctccagttcacccagtttgaagatgagc
ggctgccagtccctcacaccgagccacggggccaccagggacctgcagagcagcccgtcc
aacctgccactggggttcctgggcgaaggcgatgccatcaccaaagccatccaggacgca
cggcagctgctgcacggccacagcggagccctggagggatcactgagcaactcctaccgc
aaggaccacgtcgggattgattcttcccccgggaaggagcggatggaggagacccctgtg
caccggctggacgaggctctgctgacctgcgagatggacggctcccggcacttccccgag
tctaggaacaacaaccacatcaagcggcccatgaacgccttcatggtgtgggcgaaggac
gagaggaggaagattctgcaggccttcccggacatgcacaactccagcatcagcaagatc
ctgggctcccgctggaagtccatgaccaaccaggagaagcagccctactacgaggagcaa
gcccggctgagccggcagcacctggagaaataccccgactacaagtacaagccccgaccc
aaacgcacctgcatcgtggaggggaagcggctgcgtgtgggcgagtacaaggcgctgatg
aggaaccggcggcaggacgccaggcagggctacttgatagggccccagggcagccagctg
ccccccggctcctcggacgtgctgtacccgcgggcggtggggatgccgctggcggccccc
nccgggggggcccgcgctgccgagcccgccatgcctgtcatcgtcaacacccgcagcctc
aaggagggcgacggtggcgacgacgggcacttggtggccgatggcgagatgtaccgctac
agcgaggaggaggactcggagggcgaggacaagagcgatggcgagctggtggtgctgacg
gactga
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