Columba livia (rock pigeon): 102092319
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Entry
102092319 CDS
T02912
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102092319 (TRIM71)
04121 Ubiquitin system [BR:
clv04121
]
102092319 (TRIM71)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102092319 (TRIM71)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102092319 (TRIM71)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102092319 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
OapC
Motif
Other DBs
NCBI-GeneID:
102092319
NCBI-ProteinID:
XP_013226442
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKAVTTRVEKIRQVKAKSLYLQVEKLRQNLNKFXFEEGRTMDILLARDRMLAQVQELKS
VRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFT
VIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSDQQNGTYVVSYRPQLEGEHLVSVMM
CNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDGEGKLCRPWGVSIDKEGYIIVADRS
NNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQF
ILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKH
FDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEG
RIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRIL
VF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagatgccctccaggattccagg
actctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactgagt
atcgaacaggcccaggctgtggcagagcaggttgagatgaaagcgaaggtggtacagtct
gaagtaaaagcggtgactactagagtggaaaagattcgtcaagtcaaggctaagtcactc
tacttgcaagttgaaaagttacgtcagaacctaaacaagtttnnttttgaggaaggtcgt
accatggatattcttctggctcgggaccgcatgctggctcaggtgcaggagctgaagagt
gtcagaggccttctccagccacaggaagatgacaggatcatgttcaccccccctgaccag
gcattgtatatggccattaaatctatgggctttgtcagcagtggggcttttgcgcctctg
accaaagccaccggggaaggcctcaagcgtgcactgcagggcaaagtggcctctttcaca
gtgataggctacgaccacgacggtgagcctcgcctttcaggaggtgacatgatctccgca
gtggtgatgggcccagatggaaacctttttggggcagatgtcagtgatcagcagaacggg
acctatgtggtcagctaccgtccacagctagagggagagcacctggtgtccgtgatgatg
tgcaaccaacacattgagaacagccccttcaaggtcgtggtgaaatctgggcgcagctac
ataggcattgggctgccggggctctcctttggcagtgaaggagacggcgagggcaagctc
tgccgcccctggggcgttagcatagataaagaaggctacattattgttgctgaccgcagt
aataaccgcatccaggtgttcaaaccatgcgggaccttccatcacaagtttggcacgctg
gggtcccggccgggccagtttgatcgtcctgctggtgtggcctgtgacatctcacgtagg
atcgttgtggctgacaaggacaatcatcgcatccagatcttcacgtttgaggggcagttc
attctgaagttcggggagaaaggaacgaagaacgggcaattcaattacccatgggatgtg
gccgtcaatgcagagggcaagatcctggtctctgacacgaggaaccatcgtgttcagctc
tttgggcccgacggtgtgtttctcaacaagtatggctttgaaggggcactctggaagcac
tttgattcccccagaggtgtgactttcaatcacgagggccacttggtagtgaccgacttc
aacaaccatcgccttctggtcatccatcccgattgccagtccgcacgttttctgggctcg
gaaggcaccgggaacggccagttcctgcgcccgcagggggtggcggtggatcaagagggg
cgcatcatcgtggccgactccaggaaccaccgggtgcagatcttcgagtcaaatggtagc
tttttatgcaagtttggcactcagggaagcggctttggtcagatggaccgtccttcaggt
atagccgtcacccctgatggcatgattgtggtggtcgactttggaaacaatcgaattctc
gtcttctaa
DBGET
integrated database retrieval system
