KEGG   Columba livia (rock pigeon): 102092371
Entry
102092371         CDS       T02912                                 
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1
  KO
K11757  protein polybromo-1
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102092371 (PBRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clv03021]
    102092371 (PBRM1)
   03036 Chromosome and associated proteins [BR:clv03036]
    102092371 (PBRM1)
Transcription machinery [BR:clv03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102092371 (PBRM1)
Chromosome and associated proteins [BR:clv03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    102092371 (PBRM1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 102092371
NCBI-ProteinID: XP_021152082
LinkDB
Position
Unknown
AA seq 1625 aa
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEED
EDEEGHDNQGANSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELAKSSLRIRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNN
QGQLISEPFFHLPSKKKYPDYYQQIKSPISLQQIRTKLKNHEYETLDQLEADLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIR
KQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK
YVGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCXXXXXXXXXXXXXXKPPLTF
DIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKN
GEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSS
LHRTYSQDCSFKNSMYHVGDYVYVEPAEPNLQPHIVCIERLWEDSAGEKWLYGCWFYRPN
ETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESR
YSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANADKVDEEKQAETLEDSKVD
ESILHLEKVWKITQFIVRMLKNIFVQYAGIEKMWVRDGAAYFFGPIFIHPEETEHEPTKM
FYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEISENDVFLCESRYNESDKQMK
KFKGLKRFSLSAKVVDDEIYYFRKPIIPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEM
GEEEGDMTETPSMPQLQTPLASELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILF
SSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGMISGYPPVLPPLQGPVDGI
VSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGASPFGQQIGIL
GPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSI
SKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAY
NIENV
NT seq 4878 nt   +upstreamnt  +downstreamnt
atgaggagactggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagcaacctcgccttccagcagtgtcagcggaggagactttgatgac
ggccaccactccacaaatataccaggcccaagcagaaagaggaggagactttccaatctc
ccgactgtagatcctattgctgtatgccatgaactttacaacaccatcagagattacaaa
gatgaacaaggcaggctcctttgtgagcttttcattagggcaccgaagcgaagaaatcag
ccagattattatgaagtggtttctcagccaattgatttaatgaaaatccagcaaaagctg
aagatggaggaatatgatgatgtgaatgtgctgactgctgattttcagcttctttttaac
aacgcaaaggcttactataagcctgattctcctgaatataaagctgcctgcaaattatgg
gagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgaggaggaagat
gaagatgaggaaggacatgacaatcaaggcgcaaattctgaattatcatctccaggttac
ctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaacccatcagga
cgcctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagattattat
gcgataataaaggagcccatagatcttaaaactattgcccaaaggatacagaatggaact
tataaaagtattcatgcaatggccaaggatatagatcttctggcaaagaatgccaaaacc
tacaatgagcctggatcacaagtattcaaggatgcaaatgcaattaaaaaaatatttaat
atgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccgaatcaggact
ccatcaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggcagtgtt
ggtgatgagagaaattcttctaacaaatattaccgtaacaaaagatcagcccaaggggat
cgtttatcagcaataaccatggcactgcaatatggatcagaaagtgatgaagatgcagct
ttggctgctgctgctcgttatgaagagggagaatctgaagctgagagcattacatccttc
atggacacttctaatcctctatatcagctttatgacacagttagaagttgccgaaataat
cagggccagctcatatctgaaccctttttccacttgccctccaagaaaaagtatcctgat
tattatcagcaaattaaatcacctatttccttgcagcagatcagaaccaaactgaaaaac
catgaatatgaaactttagatcagttggaggctgatttgaacttgatgtttgaaaatgcc
aagcgctacaacgttcccaattctgccatctataaaagagtactgaaaatgcagcaggtt
atgcaggcaaagaagaaggagcttgctaggagagacgacattgaggatggggacagcatg
atttcttctgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaatatacgg
aagcagcgaatgaagatcttgtacaatgcagttctggaagctcgagaaccgggcacaggc
agacggctctgtgatctgtttatggttaagccatccaaaaaggactatccagactattat
aaaattatcttggagccaatggacttgaaaatgatagaacacaatatccgcaatgataag
tacgtaggggaagaagccatgattgaagacatgaagctcatgttccggaatgcgagacat
tataatgaggagggctcccaggtatacaatgatgcccatatgctggaaaagatccttaaa
gaaaaaaggaaagaactgggacccctagctgaagatgatgatgttgcatcccctaaacta
aagctaagtagaaaaagtggcatttctcctaaaaaatcgaaatacatgactccaatgcaa
cagaagctgaatgaggtgtatgaagctgttaagaattacacagataaaagaggcaggcga
ttgagcgccatcttcttgaggctgccttctcggtctgagcttcctgactattatgtgacc
attaaaaagcccgttgacatggaaaagatcagaagtcacatgatggcaaataaataccag
gatattgactccatggtggaggactttgtaatgatgttcaataatgcttgcacatataac
gagccagaatctttgatttataaagatgccctggtcctgcataaagttttgcttgaaact
cggagagaaatagaaggagatgaggattctcatgtgcccaatgtcaccttgctaattcag
gaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggcagatgc
tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataaacctcctctgactttt
gatattatccgaaaaaatgttgaaaataatcgctatagaagattggacttgttccaggag
aatatgtttgaggtactggagagggcgaggagaatgaacaggactgattcagagatttac
gaggatgcagttgaacttcagcagttctttattaaaattagagatgaactttgtaagaat
ggagagattcttctgtcacctgctctcagctataccaccaagcatcttcacaatgatgta
gaaaaggaaaagaaggaaaagctgcccaaagaaatagaggaggataagctgaaaagagag
gaggagaagagagaagcggaaaagagtgaagattcttctgggtcagctgggctgtcaagc
ttgcatcggacctacagccaggattgcagcttcaagaacagcatgtaccatgtaggagat
tatgtgtatgtggagcctgcggaacccaacttgcaacctcacatagtctgtattgagagg
ctgtgggaagactcagctggagagaaatggctctatggctgttggttttatcgaccaaat
gaaacgtttcatcttgccacacgaaaattcttggagaaagaagttttcaaaagtgactat
tacaataaagttcctgttagcaaaattttgggaaaatgcgtggtcatgtttgtcaaggaa
tattttaaattgtgtcctgaaaacttcagagatgaggatgtctatgtctgcgagtcacgt
tattctgcaaaaacaaaatcttttaaaaagattaaactgtggactatgcctgtgagctct
gtgaggtttgtcccacgagatgtacccctgcccgtggtccgtgttgcttctgtatttgct
aatgcagacaaagtagatgaggagaaacaggctgaaacgttggaggacagtaaggtggac
gaaagtatccttcatcttgaaaaggtatggaagataacacagtttattgtcagaatgctt
aagaatatttttgtccaatatgctggaattgaaaagatgtgggtgcgagatggagctgca
tacttctttggtccaatctttatacatccggaagaaactgaacatgaaccaactaaaatg
ttctacaagaaggaagtgtttttgagtaacttggaggagacttgtccgatgacttgcatt
ttgggaaagtgtgctgttctgtcattcaaagacttcctctcctgcagaccaacagaaatc
tctgagaacgatgtttttctttgtgagagccgctacaatgaaagcgacaaacaaatgaag
aaatttaaagggctgaagaggttttcactctctgcgaaagttgtagatgatgaaatatac
tattttaggaaacccataattcctcaaaaggaaccatctccactactggaaaagaagatt
cagcagctagaagcaaaatttgctgagttggaaggaggtgatgaggacatggaagagatg
ggggaagaggaaggtgatatgactgaaacgccttctatgcctcagcttcagaccccatta
gctagtgaattggatataatgccttatactccaccacagtccactcccaagtctgttaag
ggcagcaccaagaaggagggatcaaaaaggaagatcaacatgagtgggtacatcttattt
agcagcgagatgagagctgtgattaaagctcaacacccagactactcgtttggagagctc
agcaggcttgtaggaactgaatggagaaacttggaagcaacaaagaaagcagagtatgaa
ggcatgataagtggctatccaccggtgctgccacctttgcagggcccagttgatggcatt
gttagcatgggcagcatgcagccacttcacccaggggtgcccccaccccaccaacttccg
ccaggtatgccaggcatcccaggcatcccaccacccggtgttataggccaaaatgtgtcc
cccatggtaggcactccagcacccggagcaagtccttttggacagcagatagggatcctc
ggcccgccaggacagcaggcaccccctccgtaccccggccagagcccagcaagtcagccg
gttatgcagcagcccacaactcccatgttcgtgtcccctccaccaaagacacagaggctt
ctccactctgaagcctatctgaaatacattgaggggctcagtgctgaatccaacagcatc
agcaagtgggaccagacccttgcagcacgaagacgagatgtccatttatcaaaagaacaa
gagagccgactcccttcacactggttgaaaagtaaaggggctcataccacaatggctgat
gctctatggcgtctgcgagacttgatgctacgagacacccttaatatccgtcaggcatac
aacatagaaaatgtttag

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