Columba livia (rock pigeon): 102092371
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Entry
102092371 CDS
T02912
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1
KO
K11757
protein polybromo-1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102092371 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clv03021
]
102092371 (PBRM1)
03036 Chromosome and associated proteins [BR:
clv03036
]
102092371 (PBRM1)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102092371 (PBRM1)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
102092371 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102092371
NCBI-ProteinID:
XP_021152082
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEED
EDEEGHDNQGANSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELAKSSLRIRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNN
QGQLISEPFFHLPSKKKYPDYYQQIKSPISLQQIRTKLKNHEYETLDQLEADLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIR
KQRMKILYNAVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDK
YVGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCXXXXXXXXXXXXXXKPPLTF
DIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKN
GEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSS
LHRTYSQDCSFKNSMYHVGDYVYVEPAEPNLQPHIVCIERLWEDSAGEKWLYGCWFYRPN
ETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESR
YSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANADKVDEEKQAETLEDSKVD
ESILHLEKVWKITQFIVRMLKNIFVQYAGIEKMWVRDGAAYFFGPIFIHPEETEHEPTKM
FYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEISENDVFLCESRYNESDKQMK
KFKGLKRFSLSAKVVDDEIYYFRKPIIPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEM
GEEEGDMTETPSMPQLQTPLASELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILF
SSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGMISGYPPVLPPLQGPVDGI
VSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGASPFGQQIGIL
GPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSI
SKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAY
NIENV
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagcaacctcgccttccagcagtgtcagcggaggagactttgatgac
ggccaccactccacaaatataccaggcccaagcagaaagaggaggagactttccaatctc
ccgactgtagatcctattgctgtatgccatgaactttacaacaccatcagagattacaaa
gatgaacaaggcaggctcctttgtgagcttttcattagggcaccgaagcgaagaaatcag
ccagattattatgaagtggtttctcagccaattgatttaatgaaaatccagcaaaagctg
aagatggaggaatatgatgatgtgaatgtgctgactgctgattttcagcttctttttaac
aacgcaaaggcttactataagcctgattctcctgaatataaagctgcctgcaaattatgg
gagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgaggaggaagat
gaagatgaggaaggacatgacaatcaaggcgcaaattctgaattatcatctccaggttac
ctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaacccatcagga
cgcctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagattattat
gcgataataaaggagcccatagatcttaaaactattgcccaaaggatacagaatggaact
tataaaagtattcatgcaatggccaaggatatagatcttctggcaaagaatgccaaaacc
tacaatgagcctggatcacaagtattcaaggatgcaaatgcaattaaaaaaatatttaat
atgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccgaatcaggact
ccatcaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggcagtgtt
ggtgatgagagaaattcttctaacaaatattaccgtaacaaaagatcagcccaaggggat
cgtttatcagcaataaccatggcactgcaatatggatcagaaagtgatgaagatgcagct
ttggctgctgctgctcgttatgaagagggagaatctgaagctgagagcattacatccttc
atggacacttctaatcctctatatcagctttatgacacagttagaagttgccgaaataat
cagggccagctcatatctgaaccctttttccacttgccctccaagaaaaagtatcctgat
tattatcagcaaattaaatcacctatttccttgcagcagatcagaaccaaactgaaaaac
catgaatatgaaactttagatcagttggaggctgatttgaacttgatgtttgaaaatgcc
aagcgctacaacgttcccaattctgccatctataaaagagtactgaaaatgcagcaggtt
atgcaggcaaagaagaaggagcttgctaggagagacgacattgaggatggggacagcatg
atttcttctgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaatatacgg
aagcagcgaatgaagatcttgtacaatgcagttctggaagctcgagaaccgggcacaggc
agacggctctgtgatctgtttatggttaagccatccaaaaaggactatccagactattat
aaaattatcttggagccaatggacttgaaaatgatagaacacaatatccgcaatgataag
tacgtaggggaagaagccatgattgaagacatgaagctcatgttccggaatgcgagacat
tataatgaggagggctcccaggtatacaatgatgcccatatgctggaaaagatccttaaa
gaaaaaaggaaagaactgggacccctagctgaagatgatgatgttgcatcccctaaacta
aagctaagtagaaaaagtggcatttctcctaaaaaatcgaaatacatgactccaatgcaa
cagaagctgaatgaggtgtatgaagctgttaagaattacacagataaaagaggcaggcga
ttgagcgccatcttcttgaggctgccttctcggtctgagcttcctgactattatgtgacc
attaaaaagcccgttgacatggaaaagatcagaagtcacatgatggcaaataaataccag
gatattgactccatggtggaggactttgtaatgatgttcaataatgcttgcacatataac
gagccagaatctttgatttataaagatgccctggtcctgcataaagttttgcttgaaact
cggagagaaatagaaggagatgaggattctcatgtgcccaatgtcaccttgctaattcag
gaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggcagatgc
tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataaacctcctctgactttt
gatattatccgaaaaaatgttgaaaataatcgctatagaagattggacttgttccaggag
aatatgtttgaggtactggagagggcgaggagaatgaacaggactgattcagagatttac
gaggatgcagttgaacttcagcagttctttattaaaattagagatgaactttgtaagaat
ggagagattcttctgtcacctgctctcagctataccaccaagcatcttcacaatgatgta
gaaaaggaaaagaaggaaaagctgcccaaagaaatagaggaggataagctgaaaagagag
gaggagaagagagaagcggaaaagagtgaagattcttctgggtcagctgggctgtcaagc
ttgcatcggacctacagccaggattgcagcttcaagaacagcatgtaccatgtaggagat
tatgtgtatgtggagcctgcggaacccaacttgcaacctcacatagtctgtattgagagg
ctgtgggaagactcagctggagagaaatggctctatggctgttggttttatcgaccaaat
gaaacgtttcatcttgccacacgaaaattcttggagaaagaagttttcaaaagtgactat
tacaataaagttcctgttagcaaaattttgggaaaatgcgtggtcatgtttgtcaaggaa
tattttaaattgtgtcctgaaaacttcagagatgaggatgtctatgtctgcgagtcacgt
tattctgcaaaaacaaaatcttttaaaaagattaaactgtggactatgcctgtgagctct
gtgaggtttgtcccacgagatgtacccctgcccgtggtccgtgttgcttctgtatttgct
aatgcagacaaagtagatgaggagaaacaggctgaaacgttggaggacagtaaggtggac
gaaagtatccttcatcttgaaaaggtatggaagataacacagtttattgtcagaatgctt
aagaatatttttgtccaatatgctggaattgaaaagatgtgggtgcgagatggagctgca
tacttctttggtccaatctttatacatccggaagaaactgaacatgaaccaactaaaatg
ttctacaagaaggaagtgtttttgagtaacttggaggagacttgtccgatgacttgcatt
ttgggaaagtgtgctgttctgtcattcaaagacttcctctcctgcagaccaacagaaatc
tctgagaacgatgtttttctttgtgagagccgctacaatgaaagcgacaaacaaatgaag
aaatttaaagggctgaagaggttttcactctctgcgaaagttgtagatgatgaaatatac
tattttaggaaacccataattcctcaaaaggaaccatctccactactggaaaagaagatt
cagcagctagaagcaaaatttgctgagttggaaggaggtgatgaggacatggaagagatg
ggggaagaggaaggtgatatgactgaaacgccttctatgcctcagcttcagaccccatta
gctagtgaattggatataatgccttatactccaccacagtccactcccaagtctgttaag
ggcagcaccaagaaggagggatcaaaaaggaagatcaacatgagtgggtacatcttattt
agcagcgagatgagagctgtgattaaagctcaacacccagactactcgtttggagagctc
agcaggcttgtaggaactgaatggagaaacttggaagcaacaaagaaagcagagtatgaa
ggcatgataagtggctatccaccggtgctgccacctttgcagggcccagttgatggcatt
gttagcatgggcagcatgcagccacttcacccaggggtgcccccaccccaccaacttccg
ccaggtatgccaggcatcccaggcatcccaccacccggtgttataggccaaaatgtgtcc
cccatggtaggcactccagcacccggagcaagtccttttggacagcagatagggatcctc
ggcccgccaggacagcaggcaccccctccgtaccccggccagagcccagcaagtcagccg
gttatgcagcagcccacaactcccatgttcgtgtcccctccaccaaagacacagaggctt
ctccactctgaagcctatctgaaatacattgaggggctcagtgctgaatccaacagcatc
agcaagtgggaccagacccttgcagcacgaagacgagatgtccatttatcaaaagaacaa
gagagccgactcccttcacactggttgaaaagtaaaggggctcataccacaatggctgat
gctctatggcgtctgcgagacttgatgctacgagacacccttaatatccgtcaggcatac
aacatagaaaatgtttag
DBGET
integrated database retrieval system