KEGG   Columba livia (rock pigeon): 102092442
Entry
102092442         CDS       T02912                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
clv  Columba livia (rock pigeon)
Pathway
clv04510  Focal adhesion
clv04512  ECM-receptor interaction
clv04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:clv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102092442 (COL2A1)
   04518 Integrin signaling
    102092442 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102092442 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:clv00536]
    102092442 (COL2A1)
Glycosaminoglycan binding proteins [BR:clv00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102092442 (COL2A1)
SSDB
Motif
Pfam: COLFI Collagen
Other DBs
NCBI-GeneID: 102092442
NCBI-ProteinID: XP_021138352
LinkDB
Position
Unknown
AA seq 576 aa
MGGCFGVLNPRFWGPSPPSSPQGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGV
PGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKVGDNEGTKLGAGDV
GEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGNPGADGPPGRDGAAGVKGAQGPMGPA
GPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPS
GPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDM
SAFAGLGQPEKGPDPIRYMRADEAAGGLRQHDVEVDATLKALNNQIESIRSPEGSKKRGA
RRPRGSLLQPPKPRVLTPVLLPAAGDYWIDPNQGCTLDAIKVFCNMETGETCVYPNPRSI
PKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLSTEGSQNVTY
HCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIE
YRSQKTSRLPIVDIAPMDIGGAEQEFGVDIGPVCFL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggggggttgttttggggtcctgaaccccaggttttggggtccctcaccaccatcctcc
ccacagggtcctgcaggtgagaggggagaacaaggagcccccggtccctccggcttccag
gggctgcccgggccaccaggtccccctggcgagagcggcaaacccggagatcagggtgtt
cctggagaagccggtgcccccggtctcgttggtcccagaggcgaacgcggtttccccggc
gaacgcggctcccccggcgcacaagggctgcaaggtccccgcgggctccccggcacgccg
ggcaccgacggacccaaggtgggtgacaacgaggggacaaagctcggtgctggagacgtc
ggagagaagggtcccgagggagcccccggcaaggacggcgcacgcggtctcacgggtccc
atcggtccccccggccccgctggccccaacggcgagaagggtaaccccggcgcggacggc
ccccccggcagagacggcgcagccggcgtgaagggcgcacagggtcccatgggtcccgcc
ggccccgccggcgctcgcggaatgccgggtccccaagggcctcgcggtgacaagggcgag
accggagaggctggagagagggggctgaagggtcaccgcggcttcaccggcctgcagggg
ctgcccggaccacccggtccttctggagaccaaggtgctgctgggcccgcgggtccctcg
ggtcccaggggtccccccggccccgtcggcccctccggcaaagacggttccaacggcatg
cccggccccatcggcccccccggcccccgcgggcggagcggcgaaccaggtcccgcgggt
cctcccggaaacccaggtccccccggtcctcccggtccccccggcaccggcatcgacatg
tcggctttcgcgggcctgggccagcccgagaagggtccggaccccatccggtacatgcgc
gcggacgaggcggccggcgggctgcggcagcacgacgtggaggtggacgccacgctcaag
gccctcaacaaccagatcgagagcatccgcagccccgagggctccaagaaaaggggagcg
cgacgtccgcgagggtctttgctccagcctccgaaaccgcgtgttctcacaccggttctc
ctccccgccgcaggcgactactggatcgacccgaaccaaggctgcactttggacgccatc
aaagttttctgcaacatggagacgggcgagacctgcgtctaccccaacccccggagcatc
cccaagaagaactggtggaccagcaagaccaaagacaagaagcacgtgtggttcgcagag
accatcaacggcgggttccactttagctacggcgatgaagacctggctcccaacacggcc
aacatccagatgaccttcctgcgcctgctctccaccgagggctcccagaacgtcacttac
cactgcaagaacagcatcgcctacatggacgaggagacgggcaacctgaagaaggccatc
ctcatccagggctccaacgacgtggagatccgagccgagggcaacagcaggttcacctac
agcgtcctggaggacggctgcacgaaacacaccggcaagtggggcaagacagtcatcgag
taccggtcacagaagacctcgcgcctgcccattgtagatattgcacctatggacattggt
ggagccgagcaggagtttggcgtggacatcggcccagtctgcttcttgtaa

DBGET integrated database retrieval system