Columba livia (rock pigeon): 102092442
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Entry
102092442 CDS
T02912
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04510
Focal adhesion
clv04512
ECM-receptor interaction
clv04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102092442 (COL2A1)
04518 Integrin signaling
102092442 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102092442 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clv00536
]
102092442 (COL2A1)
Glycosaminoglycan binding proteins [BR:
clv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102092442 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Motif
Other DBs
NCBI-GeneID:
102092442
NCBI-ProteinID:
XP_021138352
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MGGCFGVLNPRFWGPSPPSSPQGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGV
PGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKVGDNEGTKLGAGDV
GEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGNPGADGPPGRDGAAGVKGAQGPMGPA
GPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPS
GPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDM
SAFAGLGQPEKGPDPIRYMRADEAAGGLRQHDVEVDATLKALNNQIESIRSPEGSKKRGA
RRPRGSLLQPPKPRVLTPVLLPAAGDYWIDPNQGCTLDAIKVFCNMETGETCVYPNPRSI
PKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLSTEGSQNVTY
HCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIE
YRSQKTSRLPIVDIAPMDIGGAEQEFGVDIGPVCFL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggggggttgttttggggtcctgaaccccaggttttggggtccctcaccaccatcctcc
ccacagggtcctgcaggtgagaggggagaacaaggagcccccggtccctccggcttccag
gggctgcccgggccaccaggtccccctggcgagagcggcaaacccggagatcagggtgtt
cctggagaagccggtgcccccggtctcgttggtcccagaggcgaacgcggtttccccggc
gaacgcggctcccccggcgcacaagggctgcaaggtccccgcgggctccccggcacgccg
ggcaccgacggacccaaggtgggtgacaacgaggggacaaagctcggtgctggagacgtc
ggagagaagggtcccgagggagcccccggcaaggacggcgcacgcggtctcacgggtccc
atcggtccccccggccccgctggccccaacggcgagaagggtaaccccggcgcggacggc
ccccccggcagagacggcgcagccggcgtgaagggcgcacagggtcccatgggtcccgcc
ggccccgccggcgctcgcggaatgccgggtccccaagggcctcgcggtgacaagggcgag
accggagaggctggagagagggggctgaagggtcaccgcggcttcaccggcctgcagggg
ctgcccggaccacccggtccttctggagaccaaggtgctgctgggcccgcgggtccctcg
ggtcccaggggtccccccggccccgtcggcccctccggcaaagacggttccaacggcatg
cccggccccatcggcccccccggcccccgcgggcggagcggcgaaccaggtcccgcgggt
cctcccggaaacccaggtccccccggtcctcccggtccccccggcaccggcatcgacatg
tcggctttcgcgggcctgggccagcccgagaagggtccggaccccatccggtacatgcgc
gcggacgaggcggccggcgggctgcggcagcacgacgtggaggtggacgccacgctcaag
gccctcaacaaccagatcgagagcatccgcagccccgagggctccaagaaaaggggagcg
cgacgtccgcgagggtctttgctccagcctccgaaaccgcgtgttctcacaccggttctc
ctccccgccgcaggcgactactggatcgacccgaaccaaggctgcactttggacgccatc
aaagttttctgcaacatggagacgggcgagacctgcgtctaccccaacccccggagcatc
cccaagaagaactggtggaccagcaagaccaaagacaagaagcacgtgtggttcgcagag
accatcaacggcgggttccactttagctacggcgatgaagacctggctcccaacacggcc
aacatccagatgaccttcctgcgcctgctctccaccgagggctcccagaacgtcacttac
cactgcaagaacagcatcgcctacatggacgaggagacgggcaacctgaagaaggccatc
ctcatccagggctccaacgacgtggagatccgagccgagggcaacagcaggttcacctac
agcgtcctggaggacggctgcacgaaacacaccggcaagtggggcaagacagtcatcgag
taccggtcacagaagacctcgcgcctgcccattgtagatattgcacctatggacattggt
ggagccgagcaggagtttggcgtggacatcggcccagtctgcttcttgtaa
DBGET
integrated database retrieval system