Columba livia (rock pigeon): 102092678
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Entry
102092678 CDS
T02912
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04142
Lysosome
clv04144
Endocytosis
clv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102092678 (CLTC)
04142 Lysosome
102092678 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102092678 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102092678 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clv04147
]
102092678 (CLTC)
Membrane trafficking [BR:
clv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102092678 (CLTC)
Exosome [BR:
clv04147
]
Exosomal proteins
Proteins found in most exosomes
102092678 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
102092678
NCBI-ProteinID:
XP_005511997
UniProt:
A0A2I0LYH7
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC
QIINYRTDAKQKGLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAE
ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISDKHD
VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVEE
ENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGI
LRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYT
PDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALK
NNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFT
DLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHE
QLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
LPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELI
NVCNENSLFKSLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQL
AKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVET
ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTL
VHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQ
DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMSHPTDAWKEGQFKDIITKVANVELYYKAIQFY
LDFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLF
IIEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKD
RLYKDAMQYASESKDTELAEELLQWFLQENKRECFGACLFTCYDLLRPDVVLETAWRHNI
MDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPP
QAPFGYGYTAPPYGQPQPGFGYSM
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgacaaattcatctgcataagagagaaagtaggagaacaggctcaagtggtg
atcattgacatgaatgatcccagcaaccctattcgacgaccgatttcagcagacagtgct
atcatgaaccctgccagtaaagtcattgcattaaaagctggaaaaacgcttcaaatattt
aacattgaaatgaagagcaaaatgaaggctcacacaatgacagatgatgtcaccttctgg
aagtggatctctctgaataccgttgcccttgtaacggataatgccgtctaccactggagc
atggagggggagtcccagcctgtgaaaatgtttgatcgccattctagtcttgctggctgc
cagatcatcaactaccgcacggatgccaagcagaaggggctgctgctgactggcatatct
gcacagcaaaatcgtgttgtgggagcaatgcagctatattctgtcgatagaaaagtgtca
cagccaatcgagggacacgcagcgagcttcgcacagttcaagatggagggaaatgctgaa
gaatccactctcttctgttttgcagtaagagggcaagctgggggtaagctgcatatcatt
gaagttggcacaccaccgactgggaatcagccgttcccaaagaaagcagtggatgtcttc
tttcctcctgaagcacaaaacgactttcctgttgccatgcagatcagtgacaagcatgat
gtggtgtttctcataacaaaatatggctatatccacttgtatgacctggaaactggcacc
tgtatctacatgaacagaatcagtggagagaccatatttgttactgcgcagcatgaagca
acagctggaattattggagtaaacagaaagggacaggtgctctcagtgtgtgtggaagaa
gagaatattattccttatatcacgaatgtgctgcagaatcctgacctagctttacgtatg
gctgttcgcaacaacctggcaggtgccgaggaactctttgcccggaaattcaacgcactg
ttcgcacaagggaactattccgaggcagcaaaagtggcagctaatgctccaaagggaatc
ctgcgtactccagacaccatacggcggttccagagtgttccagctcagccagggcagact
tcccctttactccagtatttcggcattctgcttgaccaggggcaactgaataagtacgag
tcgctggagctgtgcagaccggtgcttcagcagggacgcaaacagctcttggaaaaatgg
ttgaaagaagataagctggagtgctcagaggagctgggagaccttgtgaaatctgtagat
cctacgctagcacttagtgtctatctgagagccaacgttccaaacaaagtcatccagtgt
tttgctgaaacaggacaagtccagaagattgttttgtatgctaagaaggttggatatact
cctgactggatttttttgctgaggaatgtgatgagaatcagccctgatcaaggacagcag
tttgcccaaatgcttgttcaagatgaagagcctcttgcagacataacacaaattgtggat
gtctttatggagtataacttaattcagcaatgtacagccttcttgctggatgcactgaag
aataatcgtccctcggaaggtcccctgcaaacacgtttactcgagatgaacctcatgcac
gcccctcaggttgcagatgccatcctgggaaaccaaatgttcactcactacgaccgggct
cacatagctcagctgtgtgagaaagctggtttgctgcagagagcacttgaacacttcacg
gacctgtatgacatcaagcgtgctgtagttcacactcatcttctcaatcctgagtggtta
gtgaattattttggttccttatcagtcgaagattctctggagtgtctgcgtgctatgctg
tctgctaacattcgtcagaacctgcagatctgtgtccaggtagcttcaaaataccatgaa
caactgtcaacacagtcgcttattgagctgtttgagtccttcaagagctttgaaggtttg
ttttatttcctgggctctattgtaaacttcagccaggatccagatgtgcacttcaagtat
attcaagctgcatgcaagacaggacaaattaaagaagtggaaagaatctgcagggaaagt
aactgttatgatccagaacgtgttaaaaacttcctcaaggaagctaaactcactgaccag
ttgccactcatcattgtatgtgatcgctttgactttgtccacgacttggtgctgtacttg
tatagaaataatctccaaaaatatattgagatttatgtacagaaggtgaatccgagccgt
ctgcctgttgttatcgggggactgcttgatgtggattgctctgaagatgtgataaagaac
cttatccttgtagtgagaggtcaattttcgactgatgagcttgttgcagaggttgagaaa
agaaacaggctgaagctgcttctgccctggctggaagcaagaatccatgaggggtgtgag
gagcccgcaactcacaatgcactggccaaaatctacattgatagtaacaacaacccagaa
agattcctgcgtgagaatccttattacgatagtcgcgttgttggcaagtactgtgagaag
agagaccctcacctggcctgtgtggcttacgagcgtggacagtgcgatttggaacttatt
aatgtgtgcaatgagaactccctcttcaaaagtctttcccgctacttagttcgtcgtaaa
gaccctgagctgtgggccagcgtcctactggaaagcaacccttacaggagaccgctgatt
gaccaggttgtgcagactgcactgtctgagacacaggaccctgaggaagtctctgttact
gtgaaggctttcatgactgcagatcttcctaatgagcttatcgaactgctggagaaaata
gttcttgataactccgtgttcagtgagcacaggaatctgcagaaccttctcattctgaca
gctattaaggctgatcgcacccgtgtcatggaatacatcaatcgcctggataactatgat
gctccagacatagccaacatagctatcagcaatgagctttttgaggaggcatttgctatc
ttcaggaagtttgatgtcaacacatcagctgtgcaggtattaatagagcacattggaaac
ctggatcgtgcatatgaatttgctgaacgctgcaatgagcctgctgtgtggagtcagctg
gctaaagcacagcttcagaaggggatggtgaaagaagcaattgattcatatattaaagca
gatgatccttcctcatacatggaagttgttcaagctgccaatgccagtggaaactgggaa
gaactggtgaagtatctccagatggcacgcaagaaggcccgggaatcatatgtggaaaca
gaattaatctttgctcttgctaaaacaaaccgtctagcagagctagaggagttcataaac
ggacccaacaatgcacatatccagcaagttggcgatcgctgttacgatgaaaagatgtat
gaagcagctaagctgttgtataacaatgtgtccaacttcggccgtttagcctcgacttta
gttcacctaggtgaataccaggcagctgtggacggtgctcggaaggcaaacagcactcgc
acatggaaagaggtctgcttcgcttgtgtcgatggaaaagagttccgtctggcccagatg
tgtggtctccatattgtagtgcatgctgatgagttggaagagctaattaactattaccag
gatcgtggctactttgaagagctgataacgatgttggaagcagcacttggactggagcga
gcacacatggggatgtttacagagctagcaattctctactccaaattcaagcctcagaag
atgagggagcacttggagctgttctggtccagagtcaacatccccaaggttctgagagct
gcagaacaagcccatctctgggctgaactggtgttcttgtatgataagtatgaagaatat
gataacgccataatcacaatgatgagtcacccaacagatgcctggaaggaaggccagttc
aaagatatcatcaccaaggtggccaacgtggagctgtattacaaggcaatccagttctat
ttggattttaaacctctcttgctcaatgatctgttgatggtgttgtcccctcggcttgac
cacactcgtgctgtcaccttctttacaaaggttaaacagctaccgctggtgaagccttac
ttgcgctctgttcaaaatcacaacaacaaatcggtgaacgagtccctgaacaacctcttc
attattgaagaagactaccaggctcttaggacttctatagatgcttatgacaactttgac
aacatttctcttgctcaacgtttggagaaacatgaactaatagagttccgaagaatcgct
gcgtatctcttcaaaggaaacaatcgctggaaacagagcgtagaactctgtaagaaagac
agattgtataaggatgccatgcagtatgcttccgaatccaaagatactgagttggcagaa
gagttgttgcagtggttcttgcaagagaacaagagagaatgctttggtgcttgtctgttc
acctgctacgatctcctgaggccggacgttgtcttggaaacagcgtggaggcacaacatc
atggactttgccatgccgtacttcattcaggtcatgaaggagtacttgaccaaggtggac
aaactggatgcatcagagtctttgagaaaggaagaggagcaagctacggaaacacaacct
atcgtttatggtcagccccagctgatgttgacagcgggacccagcgtggcagttccccca
caagcaccttttggttacggctacaccgcgcctccctacgggcaaccgcagccgggcttt
gggtacagcatgtag
DBGET
integrated database retrieval system
