Columba livia (rock pigeon): 102092746
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Entry
102092746 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clv03009
]
102092746
03036 Chromosome and associated proteins [BR:
clv03036
]
102092746
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102092746
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
Pre-60S particles
Helicases
102092746
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102092746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
102092746
NCBI-ProteinID:
XP_013225992
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MRGDHTDGALLTFCLPGVSGGVAGVSELGAIRRCLEQLWQELTEEAKEGAFSNFPLSQNT
INLLKARGVKYLFPVQVKTFQPIYDGKDVIAQARTGTGKTFSFALPLVEKLQSVSQDGRR
GRSPKVLVLVPTRELATQVAKDFKHLTRKLSVACFYGGTPYREQLDLLKSGIDILVGTPG
RIKDHIQNSKLELSSVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSAT
CPRWVYDVAKKYMKDEYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSXF
TIVFCETKKEANELAMNASLKQDAQSLHGDIPQQQREVTLKGFRTGVFEVLIATNVAARG
LDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGVCICLFQRREEDLLKQVEHKAGITF
KRVGVPSATDVIKASSNDAKKLLEAIPPSAVDYFKKSAQELIDEKGAVAALAAALAHISG
ASYIQQRSLLNSTAGFVTMVLKCSIEMRSMSYAWRGLKEQLGEEVDGKISAMRFLKGKMG
VCFDIPVDELSNIQEQWKDTRRWQLSVAEELPELEETPQEAGRGFSRFGNGRQSGGGFKR
NNWVKNGNRGCDFNKSFD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagatcacacggacggggcgctgcttacattttgtttgccgggggtctcagga
ggtgttgcgggtgtgtccgaattaggggcgatacgccggtgtcttgaacagttgtggcag
gagctgacagaagaagcaaaagaaggcgccttctccaattttcctctctcccaaaacacc
atcaaccttctcaaagctcgaggtgtaaaatacctgttccccgtgcaagtgaagactttt
cagcccatatatgacggcaaagacgtcattgctcaggctcgaacgggaactgggaaaacc
ttttctttcgctctcccgctggttgaaaagcttcagagtgtctcacaagacgggagaaga
ggccgttcaccaaaagtgctggttctggttccgaccagggaactggccacacaggtagcc
aaagacttcaagcatctcaccaggaagctgtccgtggcttgtttctatggaggaactccg
tatagagaacagcttgatctccttaaaagtggcatcgatattctagtgggaactcctggg
cgcatcaaagaccatattcagaatagcaagctggagctttccagcgtgaagcatgttgtt
ctggatgaagtcgatcacatgttggacatgggctttgctgaacaagtggaagaaatctta
ggatttgcttataaaaaaggttctgagaacaacccccaaacgctgctgttttctgcaact
tgcccacggtgggtgtatgatgtggccaaaaaatacatgaaagacgaatacgaacagatc
gacctgattggaaagaagacgcaaaggactgccacgactgtggaacacttggctatacag
tgtcgctcctctcagagagcaggagtcctcggggatatcattcaagtctacagcnntttc
accatcgtcttttgcgagaccaaaaaggaagcaaacgagctcgctatgaatgcttctctc
aaacaggatgcccagtccttgcatggtgacatcccacagcaacagagagaagtcacatta
aaaggctttagaactggtgtgtttgaagttctcattgcaacaaacgtagctgcccgtggt
ttggatattcctgaggtcgaccttgttatacagtgttcaccaccaaaagatgtcgattcc
tacatccaccgttctggacgaacgggtcgagccggccggactggggtctgcatctgttta
tttcagaggagagaggaagatctcctgaagcaggttgagcacaaagcggggattacgttt
aagcgtgtaggtgttccttctgctacagatgtaattaaagcttcaagtaatgatgccaaa
aagttgttggaggccattcctccttctgcagtagactacttcaaaaaatctgctcaagag
ctcatagacgaaaaaggggcagttgctgccctggctgcagctctggcccatatttctggg
gcatcttacatacagcagcgctccttactcaactcaactgcgggctttgtgaccatggtg
ttgaagtgctcaatagaaatgcgtagcatgagctatgcttggcgaggactaaaagagcag
cttggtgaggaagtggatggcaaaatatctgcaatgcgtttcctcaaggggaagatgggg
gtgtgctttgatatccctgttgatgaactgagtaacatacaggagcagtggaaggacacc
aggcgctggcagctgtcggtggcagaggagttgcctgagctggaggagacgccccaggag
gctggacgagggttctccaggttcggaaatgggaggcaaagtggcggcggcttcaagagg
aacaactgggttaagaacggaaaccgggggtgcgattttaacaagtcatttgattaa
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