Columba livia (rock pigeon): 102092758
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Entry
102092758 CDS
T02912
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clv03016
]
102092758 (TRMT13)
Enzymes [BR:
clv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
102092758 (TRMT13)
Transfer RNA biogenesis [BR:
clv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102092758 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
Motif
Other DBs
NCBI-GeneID:
102092758
NCBI-ProteinID:
XP_013224448
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MAAPQGSPVPGRCAYFVERKKRFCRMIPAPGRRFCGEHGQREEGNDRKRIPCPLDPKHTV
YEDQLQKHLTKCNSREKPKPVYFVQDINAGLKDVAEIPEKQVPISSLSKEELENLIIKLK
KASNGLELHLNEQILSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFV
EFGAGRGKLSHWVDVALQNAENVQFLLVERATTRFKVDGKHKRRDSVFERLQVDIQHLCL
SKFLLLEKKKLPVVGIGKHLCGAATDLALTCLVESYTACCDRENEEPAPKRCRTDKTEVA
SNNSADNESNKDNCTPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFNYFQRMSSW
ATCGMRETTTKASTSEETEDPTNDTEEHEQTLSNTENVSDTLQGILTVEERKEIGCLCKR
LIDHGRIEYLQQRGYKAALQYYTESAVSLENVLLTAVPRPSLIPEPTT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcaggggagcccggtgccggggcgatgcgcctacttcgtggagaggaag
aagcgcttctgcaggatgatcccggctccggggaggcgcttctgcggggagcacgggcag
cgggaggaaggaaatgacagaaaaagaattccgtgccctcttgatccaaaacacactgta
tatgaagaccaactacaaaaacacttaacaaaatgtaattcgagagagaagccaaagccg
gtctactttgttcaagacattaatgcaggtttaaaagatgtagcagaaataccggaaaaa
caagtacctatctcttctctgtccaaagaagagctggagaacttaattatcaagttgaaa
aaagcaagtaatggcctagaacttcaccttaacgaacaaatactgtcccaccaggcttta
caggaagccttaaatgacccaaagaatggggaatctgctttcaaacacctgaaacaacag
gcttctattctaggtaacatggaaaaattacatttacttggcccaggaagatgttttgtt
gagtttggagccgggcgaggaaagctgtctcattgggttgatgttgctttacagaatgct
gaaaatgttcagtttttgctcgtggaaagggcaactacaagattcaaggtggatggaaaa
cataaaaggagagattctgtatttgaaaggcttcaagttgatattcaacacttatgttta
agtaagttccttcttttggagaagaaaaaactaccagtagtaggaattgggaagcatttg
tgtggtgctgcaacagatcttgctttgacatgcttggttgaaagttatacagcttgctgt
gatagagaaaatgaagagcctgcaccaaaacgctgtaggactgataagacagaggtggct
tctaacaattctgctgataatgaaagcaacaaagacaactgtacgcctgtagctggaatt
gttattgcactgtgctgccatcacaagtgtgactggacacattatgtaggcagagagttc
tttaaatcagtaggacttggaccagtagaattcaattattttcagagaatgagtagctgg
gccacttgtggcatgcgagaaaccacaaccaaagcctctacaagtgaagaaactgaagat
cccactaatgacacagaagaacatgagcaaactttgagcaatacagagaatgtttctgat
actttacaggggatacttacggttgaagaacgaaaggagataggttgcctctgtaaacgg
ctgattgatcatggacggattgaatatttacaacaacgaggatacaaggctgcactacag
tattatacagagtctgctgtgtccttggagaatgtcctgttgacagctgtcccaaggcca
tctttgataccagagccaactacatga
DBGET
integrated database retrieval system
