Columba livia (rock pigeon): 102092924
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Entry
102092924 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clv03009
]
102092924
03036 Chromosome and associated proteins [BR:
clv03036
]
102092924
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102092924
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
Pre-60S particles
Helicases
102092924
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102092924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
LRIF1
Motif
Other DBs
NCBI-GeneID:
102092924
NCBI-ProteinID:
XP_021135583
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MQSAAGPGRWHCPAALVRPPAVLLQLRSPRDTRGAAGEGPEEPGNDPRLEQLCWGQKEKK
EKKSKRHDKSRRRKAETDESEQSEEDVVPPKLKKSKSGVKQNGHVREESPENTRLSSLNM
KSTHKKQHSNSSETSSGDGDSEPEQEMTEEQKEGALSNFPISKGTVQLLQARGVTYLFPV
QVKTFDPVYAGKDVIAQARTGTGKTFSFAIPLIEKLQGDTQERRRGRAPKVLVLCPTREL
ANQVAKDFKDITRKLTVACFYGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLSK
VKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKS
KYEQVDLIGKKTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSYGRTIVFCETKKEAN
ELALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVLVATNVAARGLDIPEVDLVVQS
SPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEHQLRYVEQKAGITFKRVGVPTATDII
KASSKDAIRCLDSVPETAIEYFKESARLLVQEKGPVNALAAALAHISGVSYLXGFVTMIL
HCSEEINNMSYAWRRLRELLGDDVDRKVNRMCFLKGKMGVCFDVPAADRKDIEARWEDSK
QWRLCVATELPELAESQRGGGGGGGGGGSGRSFSSCRNGRRGSSGGRNRFRGRGQKRSFD
RAFDR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagcagctggtccagggaggtggcactgccccgctgctctggtgaggccccct
gcagtgctgctccagctccggagcccacgggacacacgtggagctgctggagaggggcca
gaggagcccgggaatgacccgaggctggaacagctctgctggggacagaaggagaaaaaa
gagaagaaatctaaacggcatgacaagtctcggaggagaaaggctgagacggatgaaagt
gagcagtcggaggaggacgttgttcccccaaaactcaagaaatccaagagtggagtaaaa
caaaatggtcatgtaagagaagaaagcccagagaacacaagattatcttccttaaacatg
aaatccactcacaaaaaacagcacagtaattctagtgaaacgtcaagtggtgatggtgac
agcgagccagagcaggagatgactgaagaacagaaagagggtgctttgtccaattttcct
atttccaaagggactgttcagcttcttcaagctcgaggagtcacgtacctgtttcccgtg
caagtgaagaccttcgacccagtgtatgctggcaaagatgtcattgctcaggctcgaact
ggaacggggaagacattctcttttgctattcccttaattgaaaagcttcagggagacaca
caggaaagaagaagaggccgtgcaccaaaggtactagttctctgtccaacgagagagctg
gcgaaccaggttgccaaagacttcaaggacatcactagaaagctgacggtagcttgtttc
tatgggggaacgccatataacggacagattgatctcatgagaagcggcattgacatcttg
gttgggacacctggtcgaatcaaagaccatcttcagaacggcaagctggacctgagcaag
gtgaaacatgtggtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaagaaggattctgaagacaacccccagacgctg
ctgttttccgcaacttgcccgcactgggtgtatgacgtggcgaagaaatacatgaagtcc
aaatacgagcaggtcgacctgattgggaaaaagactcaaaaggctgccacgacagtggaa
catttggcaatagagtgtcactggtctcagagagccgcggtgatcggagacgtcattcag
gtctacagtggcagctacgggaggaccatcgtcttttgtgagaccaaaaaggaggcaaat
gaactggctctgaatgcttcaatcaagcaggattgccagtcattgcacggtgacattcct
cagaagcagagagaaatcacactgaaaggtttcagaaacggtgcattcaaagttctggtg
gcaaccaacgtggctgcccgtggtttagacatccctgaggttgacctggttgtacagagt
tcaccaccaaaggatgtggagtcctatatccatcgttctggacgcacaggtcgagctgga
cggactgggatctgcatctgtttctaccagcgaaaggaggaacatcagttaagatatgtg
gaacagaaagcgggcattacgttcaagcgtgttggcgttcctaccgcaacagatatcata
aaggcttccagcaaggacgccatcaggtgtctggattctgttcctgaaactgctattgag
tatttcaaggaatctgcccggttactagtacaggagaaggggccagtgaatgctctggct
gcagctctggcccacatttctggagtttcttacttgtaggggtttgttacaatgatactg
cactgctctgaagaaataaacaatatgagctacgcctggcgaaggctgcgagaactgttg
ggcgacgatgtcgacaggaaggtgaacagaatgtgtttcctcaagggaaaaatgggagtg
tgtttcgatgtccctgcggcagaccggaaggacatagaggcgagatgggaagattcgaaa
cagtggcgtttgtgcgtggcgactgagttacccgagttagcggagtcgcagcgaggagga
ggaggaggaggaggagggggaggaagcggccggagcttctcaagctgcaggaacgggcgg
cgcgggagctccggcggtagaaacagattcaggggcaggggccagaagcgaagctttgac
agagcctttgatcgttaa
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