KEGG   Columba livia (rock pigeon): 102092937
Entry
102092937         CDS       T02912                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
clv  Columba livia (rock pigeon)
Pathway
clv04137  Mitophagy - animal
clv04144  Endocytosis
clv04145  Phagosome
clv04148  Efferocytosis
clv05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102092937 (RAB5B)
   04145 Phagosome
    102092937 (RAB5B)
   04137 Mitophagy - animal
    102092937 (RAB5B)
   04148 Efferocytosis
    102092937 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102092937 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clv04131]
    102092937 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clv04147]
    102092937 (RAB5B)
   04031 GTP-binding proteins [BR:clv04031]
    102092937 (RAB5B)
Membrane trafficking [BR:clv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    102092937 (RAB5B)
 Endosome - Lysosome transport
    102092937 (RAB5B)
Exosome [BR:clv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102092937 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   102092937 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   102092937 (RAB5B)
  Exosomal proteins of melanoma cells
   102092937 (RAB5B)
GTP-binding proteins [BR:clv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    102092937 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta SDR-like
Other DBs
NCBI-GeneID: 102092937
NCBI-ProteinID: XP_021153811
LinkDB
Position
Unknown
AA seq 211 aa
GAARPNGQSQPSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCL
DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP
SIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKT
EPQSTGGAGGRSRGVDLHEQNPQSRSQCCSN
NT seq 636 nt   +upstreamnt  +downstreamnt
ggagccgcccggccgaacgggcagtcccagcccagtaagatctgccagttcaaactggtg
ctactgggcgagtcggcggtggggaaatccagcctggtgctgcgcttcgtcaagggccag
ttccacgagtaccaggagagcaccatcggcgccgcgtttctcacacaatccgtctgcctg
gacgacacgacggtgaagttcgagatctgggacacggccgggcaggagcggtaccacagc
ctggcccccatgtactaccggggggctcaggccgccatcgtggtctacgacatcaccaac
caggaaaccttcgcgcgcgccaagacctgggtgaaggagctgcagcgccaggccagcccc
agcatcgtcatcgccctggccggcaacaaggccgacctggccagcaagcgcatggtggag
tacgaggaggcgcaggcgtacgccgacgacaacagcctcttgttcatggagacgtcggcc
aagacggccatgaacgtcaacgatctcttcttggccatcgccaagaagctgccaaagacg
gagccgcagagcacggggggcgccgggggccgcagccggggggtcgacctgcacgagcag
aacccgcagagccggagccagtgctgtagcaactga

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