Columba livia (rock pigeon): 102093002
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Entry
102093002 CDS
T02912
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
clv04514
Cell adhesion molecule (CAM) interaction
clv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
102093002 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102093002 (NCAM1)
04517 IgSF CAM signaling
102093002 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102093002 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clv04515
]
102093002 (NCAM1)
04090 CD molecules [BR:
clv04090
]
102093002 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
clv00536
]
102093002 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clv00537
]
102093002 (NCAM1)
04091 Lectins [BR:
clv04091
]
102093002 (NCAM1)
Membrane trafficking [BR:
clv04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
102093002 (NCAM1)
Cell adhesion molecules [BR:
clv04515
]
Immunoglobulin superfamily
NCAM1/2
102093002 (NCAM1)
CD molecules [BR:
clv04090
]
Proteins
102093002 (NCAM1)
Glycosaminoglycan binding proteins [BR:
clv00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
102093002 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clv00537
]
Others
102093002 (NCAM1)
Lectins [BR:
clv04091
]
I-type lectins (Siglecs)
102093002 (NCAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
C1-set
Ig_MYOM1
C2-set_3
V-set_CD47
Ig_PDGFR_d4
Fn3_ROS1
Receptor_2B4
Pur_ac_phosph_N
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
102093002
NCBI-ProteinID:
XP_021140891
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MGILLALDGPAVCSSLAVPLAKHVHLDTSWPSCQTKPLTGECRSASLQVDIVPSQGEISV
GESKFFLCQVAGEAKYKDISWFSPNGEKLTPNQQRISVVRNDDFSSTLTIYNANIDDAGI
YKCIVSSTEEGDSEATVNVKIFQKLMFKNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKH
KGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPS
VRARQSTMNATANLSQSVTLACDADGFPEPTVTWTKDGEPIEQEDDEDKYSFNYDGSELI
IKKVDKSDEAEYICIAENKAGEQDATIHLKVFAKPKITYVENKTAMELEDQITLTCEASG
DPIPSITWRTSTRNISSEEKASWTRPEKQETLDGRIIVRSHARVSSLTLKEIQYTDAGEY
VCIASNTIGQDSQAMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQ
LLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESSEFILVQADTPSSP
SIDRVEPYSSTAQVEFDEPEATGGVPILKYKAEWRALGEGEWHSRLYDAKEANVEGMITI
TGLKPETTYSVRLSAVNGKGVGEISVPSDFKTQPVRIPHSQGEPSAPKLEGQMGEDGNSI
KVNVIKQDDGGSPIRHYLIKYKAKHSSEWKPEIRIPSGSDHVMLKSLDWNAEYEVYVIAE
NQQGKSKPAHYAFRTSAQPTAIPASTSPTSGLGTAAIVGILIVIFVLLLVAVDVTCYFLN
KCGLLMCIAVNLCGKSGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHT
EPNETTPLTEPEHPADTAATVEDMLPSVTTGTTNSDTVTETFATAQNSPTSETTTLTSSM
ALPAAAIPDSNSMSPGQATPAKGASVSSPPPSSTPKVAPLVDLSDTPSSAVATNNLSSSV
LSNQGAVLSPSAVANVAEASKVAAGNKPAASSPANLTSPPAPSEPKQEVSSTKSPEKEAV
QPSTVKSPTETTKNPSNLKSEAASGSTANPSQNEDFKMDEGAFKTPDIDLAKDVFAALGT
TTPPSVASGQAHELASSAADSSVPAAPAKTEKTPVEDKSEAQATDTKTPPAEVKTVPNEA
TQTNGNESKA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggggatcctgctggcattggacggtcctgctgtttgttcgagccttgctgtgcccctg
gctaagcacgtccacctagacaccagctggccgagctgccagacaaagccgctgacaggc
gaatgtagatcagcctctctacaagtggacattgttccaagccagggggagatcagtgtt
ggagagtctaagttcttcctatgtcaagtggcaggggaggccaaatacaaagacatctcc
tggttttcccctaacggtgagaagctgacgccgaaccaacagcgaatctcagtggtgcga
aatgatgacttctcctccactctcaccatctacaacgccaacatcgatgacgctggcatc
tataaatgcattgtcagtagcacggaggagggagactctgaggccaccgtcaatgtgaag
attttccaaaagctgatgttcaagaatgctcccactcctcaggagttcaaggaaggagac
gatgccgtgattgtgtgcgatgtggtcagctcgctgcctcctacgatcatctggaagcac
aagggcagggacgttatcctaaagaaagatgttcgatttatagtcctgtccaacaactac
ctgcagatccggggaatcaagaaaacagacgaagggacgtaccgctgtgaggggcggatc
ttggctcgcggggagatcaacttcaaagatattcaggtcatcgtaaatgtacctccttcg
gtgcgtgccaggcagagcaccatgaacgccactgccaacctcagccagtctgtcacctta
gcgtgcgacgctgatggctttcctgagccaaccgtgacgtggacaaaggacggagagccg
atagagcaggaggatgatgaagacaaatacagttttaactacgatgggtctgagctcatc
atcaagaaggtggataagagtgacgaagcagaatacatctgcatcgctgagaacaaggct
ggcgagcaggatgccaccatccatctcaaagtctttgcaaaacccaaaatcacctatgtg
gaaaataaaacagccatggagctggaggatcagattacactgacctgcgaggcatcgggg
gacccaatcccttccatcacttggagaacttccacccggaacatcagcagtgaagagaag
gcttcgtggacccggcccgagaaacaagagactctggatgggcgcatcatagtccgtagc
catgcccgggtgtcatccctgactctcaaagaaattcagtacacagatgcaggagaatat
gtatgcatagccagcaacaccatcggacaggactcccaagccatgtaccttgaagtgcag
tatgcccccaagcttcagggccctgtggctgtctatacctgggaagggaaccaagtgaac
atcacctgtgaggtgtttgcttaccccagtgctgtcatctcctggtttcgggatggacag
ctgcttcccagctccaactacagcaacatcaagatctacaacactccatcagcaagctac
ctggaggtgacaccagactccgaaaatgactttgggaactataactgcactgctgtgaac
cgcattggccaggagtcctccgagttcattcttgtgcaggcagatactccgtcctctcct
tccattgacagagtggagccctactccagtactgcccaggtggagttcgatgagcccgaa
gctaccggtggggtgcccatactcaagtacaaagcagagtggagggcactgggcgaagga
gaatggcattcaaggctgtatgatgcaaaagaagcaaacgtggagggcatgatcaccatc
actggcctgaaacctgaaacaacctactctgtgaggctgtctgcggtcaacggcaagggc
gtgggggagatcagcgtgccatccgacttcaagacacaaccagttcgcatccctcactca
caaggggaacccagcgcgcccaagctggaaggtcagatgggagaagatggaaactccatt
aaagtgaatgttatcaagcaggatgatggcggctccccaattagacactatctgatcaaa
tacaaagctaagcattcctcagagtggaagccagagatcaggattccctccggcagcgac
cacgtcatgctcaagtccctggactggaacgcggagtatgaggtttacgtgatagctgaa
aaccagcaagggaaatccaaaccggctcactacgcgttccgcacgtctgctcagcctaca
gccatcccagccagcactagccctacatcaggccttgggactgctgccattgtaggcatt
ctcattgttatctttgtgctgctcctggtggctgtggatgtcacctgctacttcctgaac
aagtgtggtctcctgatgtgcattgcggtcaacttgtgcggcaaatccggccccggagcc
aagggcaaagacatggaggagggcaaggccgccttctcgaaagatgagtccaaggagccc
attgtggaggtgcggactgaagaggagcggacccccaaccacgacggagggaaacacaca
gagcccaacgagaccaccccgctgacagagccagagcaccccgccgataccgcagctacc
gttgaggacatgctgccttctgtaaccacgggcaccactaactctgacactgtcactgaa
acctttgccactgctcagaacagccccaccagtgagaccactacgctgacctccagtatg
gccctgccagctgcggccattcccgactcaaactccatgtcgcctggccaggctactcca
gccaaaggggcctcagtctcctcaccaccaccctcctccacccccaaagtggcccccctc
gttgatctcagcgataccccaagctctgctgtagctactaacaatttgtcttcaagtgtc
ctgtccaaccaaggcgcagtgctcagccccagcgctgttgcaaacgtggccgaggcctcc
aaagtggcggctggtaacaagccagctgcctcaagccctgcaaacctcactagccctcca
gctccatcagagcccaagcaggaggtctccagcaccaagagccctgaaaaagaagctgtg
cagcccagtacagtgaagagcccaacagagacaaccaagaacccgagcaatctgaagagc
gaggctgcttcaggcagcaccgcaaacccctcccagaacgaggactttaaaatggacgaa
ggggccttcaagacaccagacattgatcttgcaaaggatgtttttgcagctcttggcact
actactcctcccagtgtggctagcgggcaggctcacgagctggcttcatccgctgcagac
agctctgtacccgctgcacctgcaaagaccgagaaaaccccagtagaagacaaatccgaa
gcgcaagcgacggacacgaagacacctcccgcggaagtgaagacggttcccaatgaagcc
acacaaacaaacggcaacgagagcaaagcatga
DBGET
integrated database retrieval system
