Columba livia (rock pigeon): 102093044
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Entry
102093044 CDS
T02912
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102093044 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clv03021
]
102093044 (TAF4B)
03036 Chromosome and associated proteins [BR:
clv03036
]
102093044 (TAF4B)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102093044 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
102093044 (TAF4B)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102093044 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
102093044
NCBI-ProteinID:
XP_021155910
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAGTVLIRSSNGQLMLVSQQATARTQSQPQNNTSVTPSVPTSTPTVRICAVQNSGNQLL
KKVTSTPVKSLSQTTNAVASTVQAPAVIQPAAATAGVTTVTAVKPSSTETPVKLPVTGPP
AQAVSQKAVSVKAEGTTVAQTSTSTEMLENVKKCKNFLATLIKLASSGPQAPQMGQNVKN
LVQNLLEAKIEPEEFTKKLYIELKSSPQPYLVPFLKKSMLALRQLMPNAQSFIQQCMQQP
APTQETVSTCTSAAPAPSIAVATTSLPVIKPVSASVTVTASPVIKPVLVSVSTTAAVQTM
KPVPGSAVVTASLRPASSVLTTTSSGLTAVQTVKPVLTSVVAKSSLQSAKPVLVSTAVSS
GTTPLQSLKPVAGTPISIKISQPNSIVAQSVGAQQVVKVKQLVVQQPSGTIVKQVSTPPQ
PSTLTLQTSAEKRIPLNTLVQTNQFSAGSILKQITLPGNKILSLQASSVQNAKIKENGTT
SFSRDEDDINDVTSMAGVNLNEENACILATNSELIGTVIHSCADEPFLSSEALQKKILNI
GKRHDIMELNSDVVNLISHATQERLRGLLEKLTVIAQHRLSTHKGNDRYIVSSDTRAQLR
FLEKLDHLEKQRKDEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQMQQREAN
LTALAAIGPRKKRPLDSSNVGSGLEGLNGNGTAPGSSGFGLTKQLLCPRITRVCLRDLIF
CMEQEREMKHSLTLYRALLK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggaactgttctcattagaagcagtaatggccaactaatgctagtatctcaa
caagcaacagcacgaacacagagtcagccacaaaataacacaagtgtgacaccatctgta
ccaaccagcacacctacggtcagaatatgtgctgtacagaactctggcaaccagttacta
aagaaagtaacatctactcctgtgaaatcattatctcaaacaacaaatgctgtggcttct
actgttcaggcacctgctgtaatacagccagcagctgcaacagctggtgttactacagtt
actgctgtaaagccttcgagtactgaaacacctgtaaaacttccagttacaggaccacct
gcgcaagctgtctcccaaaaggcagtctctgtgaaagcagagggcacaacagtagcacag
accagcacatctacagagatgctagagaatgtgaagaagtgcaagaattttcttgctaca
ctaataaaactggcatccagtggacctcaagcccctcagatggggcagaatgtgaagaat
ctggtgcaaaatctgttggaagcgaaaattgagccagaagaatttaccaaaaaactatac
atagaactcaagtcatctccacaaccgtatttagttccttttctcaagaaaagcatgctt
gccttacggcagctaatgcccaatgctcagagctttatccagcagtgtatgcagcagcca
gctccaacccaagaaactgtttcgacttgtacctctgcagcaccagctccttccatagct
gtggcaacaacttcccttccagttataaaaccagtgtctgcctctgtaacagtcacagcc
tctccggttatcaaaccagtccttgtcagtgtgtcgacaacagctgctgtgcagaccatg
aagcctgttcctggctctgcggtggtgacagcatctcttcggcctgcatcttcagtcctc
accacaacatcatcagggctgacagctgtccaaactgtcaagcctgtgctcacttctgtg
gtagcaaagtcgtctctccagtctgcaaagccagtgctggtctctacagcggtatcttca
gggacaacacctctccagtctctgaaaccagttgctggaaccccaatcagtatcaaaatc
tcacagccaaactccatcgttgcgcagtcagtgggtgctcagcaggtggttaaagtgaaa
cagttggtagtccagcaaccatcaggaaccattgtaaagcaagtatccacgcccccacaa
ccctcaacgctgaccctacagacttctgctgagaaaaggataccgctgaatacactcgtt
caaactaaccagttttctgcaggttccattctgaaacaaattaccctgccaggaaataaa
attctgtcacttcaagcatcttctgttcagaatgctaaaataaaagagaatggaacaaca
tccttcagtagagatgaagatgacatcaatgatgtgacttctatggctggggtcaatctt
aacgaggagaacgcgtgcattttggcaacaaactctgagctcattggtacagtgatccac
tcttgtgcagatgaaccttttctctcctcggaagcacttcagaagaagatcttgaacata
ggtaaaaggcatgacattatggaacttaactctgatgttgtgaacttgatctcccatgct
acacaggagagattacgagggctcctagaaaaactaactgtaattgctcagcacagatta
tcaacccacaagggcaatgataggtacatcgtatctagtgacaccagagcacagctgaga
tttcttgagaagcttgatcacctagaaaagcagagaaaggatgaagaggaacgtgaaatg
ctgcttcgagcagccaagagccgttccaataaagaggatccagagcaactgcggttaaag
cagaaagcgaaagagatgcaacaattggagttagcacaaatgcaacaaagagaagccaac
ctcacagctttggcagccattggaccaaggaagaaaagaccactggattcatcaaacgtt
ggatctgggctggagggtttgaatggcaatggaactgctcctggatcatctggttttggc
cttacaaaacagctgctctgtccaagaataacccgcgtctgtctcagggacttgatattc
tgcatggaacaagagcgggagatgaagcattctctaaccttgtaccgtgctcttctgaag
tga
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