Columba livia (rock pigeon): 102093163
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Entry
102093163 CDS
T02912
Symbol
TDRD12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102093163 (TDRD12)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102093163 (TDRD12)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102093163 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102093163
NCBI-ProteinID:
XP_005514484
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MEVSVLEIEDPGCFWVTMKGCAPYIVDEIEYKNLNAKMNQFYDKSYKDVDEVKPLVIKEG
QICVVFSEELECWCRAIVKSIMYCRDDYQIECFLVDYAKHIFVGTKDIRIAAEAFLQIPY
RAKKCRLYRTKPVTLRVDFCENTAKIVPAKRWDSAAIQYFKNLLKVTTQMKANLCAVEDN
TFDIFLYATKGDEKVCVNDDLVAKNFAHLENDDQENQTSLNAESLPAEPVNPVFPFRPVL
CQDKTPTNTETGLAVSSSFLEETYQKSSTDLNENTASSSQNLSEEQNFVFLSNKIEPFSA
LETAPLFDDLKKELAQKNFLGPNFTQSYCWPPVARGCDVVAISYQGNDPSLYIPPVLTFL
QILWCKILYICVXPLALILCPGRKKAQLVFELLGTYERCSRKLHPMLIILGQNKAAASSV
KIQGCEVIVTTPYSFLRLFEHHNLLFCRLCHLVLDEVEVLLSEATEQVFTILDCYNKSVF
AEEWEYSLHQIIAVGTHYNKHIARLIKEFMSDPYVVITAVEEASIYGNVQQVVQPCTNSE
KTAVLLKILDFTPNDLQKVLIFTDSVSEAEMVHQALKSNSIFSLRIHKESEFNFTYILEQ
WTKKYSSGTHVVLILTDDCMQPLGITDATCVVHFSFPSPSIFVQRLHSLSDNFCNVIKDS
SVDQEYTKARSVILLTEDNACHAPEILHYLQHAEAEIPPELCDITAKVLEAEEEKKLSRP
LCAYLKTFGICKNRTACPDCHQINFEIDVPQNILDKITQTSGCVTILPLHIVNATNYFGR
IVDKQKDQYTTLAKEMNEYFKKPGSKISVENVEKLALYGLCEETHFHRVQVVEISPKEEE
NSFFSVKVKYIDEGRTSQVQNYQLLHLPARFQCLPPQAVEFVVCRLKPIDNEIEWNPKVT
HYIDYKIKGKLHEAKIVLTLGNTAWVDPMVRVARLPGLNMSVSEYNVRSEILSTGLGTDN
PEHITQLQKLCRHMKVLDNSKNLEHLSIKENAAGPEDASNPQNMSMQENSTGNSNSSKIT
PGNHPCDDVAQTKEAEDSTLHQHKCFNPEIKWYQNEETVTVKVKIASVADCKCEFSGKKV
VFSAYSGDKRYLADMELHRDILAEKSTCVIKETEVIIVLVKENKEMWCKLLKNKNLHVSF
DFEHWEDFEDKSPFPVGNKKWHCTDAVTEELVDSSEDSGTESDD
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctcagtattagagattgaagatccgggttgcttttgggttactatgaaagga
tgtgcaccttacatagttgacgaaatagaatataaaaacctgaatgccaaaatgaatcag
ttctatgacaaatcttataaagatgtggatgaagtaaaaccactagtcataaaagagggc
cagatttgtgtggttttcagtgaggaactcgaatgctggtgtagagcaattgttaagtca
atcatgtactgtagagatgattatcaaatagaatgttttcttgtggattatgccaaacac
atttttgttggaacaaaggacattcgaattgcagcggaagcatttctgcagatcccatat
agagcaaaaaagtgtagactgtatcgcacaaagccggtgacgctgcgtgtcgacttctgt
gaaaatactgcaaaaatagtaccagccaaaagatgggacagtgctgctattcagtatttt
aaaaaccttctgaaagtaactacgcaaatgaaagcaaatttatgtgctgtagaagacaac
acatttgatatttttctttatgcgacaaagggggatgaaaaggtgtgcgttaatgatgat
cttgtcgcaaagaactttgcccatcttgagaacgatgatcaggagaaccaaacatcatta
aatgctgagtcccttccagctgaacctgttaatcctgtgtttcccttcaggccagtgctg
tgtcaggataaaacaccaacaaatactgagacaggtcttgctgtttccagttcctttctt
gaagagacataccaaaagtccagcacagatttaaatgaaaatactgcgtctagttctcaa
aatcttagtgaagaacaaaactttgtctttcttagcaacaaaattgaaccattttcagct
ctggaaacagcaccactttttgatgatctgaaaaaggaacttgctcagaaaaacttttta
ggccctaactttacgcaatcttactgttggcctccagtagctcgaggatgtgatgtagtt
gccatctcgtatcagggaaatgatccttctttatatattccaccagttcttacatttttg
caaatactgtggtgtaaaattttatacatatgtgtgtagccactagcacttattttatgt
cctgggcggaagaaggcacaacttgtttttgagctactgggaacatatgagcgatgctcc
agaaagcttcatccaatgctgataatacttggccagaacaaagcagcagctagcagtgtg
aaaatccaaggatgtgaagtaattgtgactacaccatatagcttcctgagactgtttgaa
caccacaatttattattttgtagactttgccatcttgttctcgatgaggttgaggtactg
ctctctgaagctactgaacaggtttttactatattagattgttacaataaatccgttttt
gctgaagagtgggagtattcactgcaccagattattgctgttggaactcactataataaa
catatagcacgcttgataaaggagttcatgagcgatccctatgttgtgataacggctgtt
gaagaagcttccatctatggaaatgtgcaacaggtcgtgcagccatgcacaaacagtgag
aaaactgctgtgttactcaaaatattggattttacccctaatgatcttcagaaggtgctg
atattcactgactcagtaagtgaggcagaaatggttcatcaggcactgaagagcaactca
atattttccttgagaatacataaagagagcgagtttaatttcacatatatcttagagcag
tggacaaaaaagtatagttctggcactcatgttgtgttaattttaacagatgactgcatg
cagcctttgggaattacagatgcaacttgcgtggtacacttcagtttcccttctccaagc
atctttgttcagcgtctacacagcctgtctgataatttctgtaatgtgataaaggattct
tctgtagatcaggaatatacaaaggcaaggtcagtcattctgctaacagaagacaatgca
tgtcatgcacctgagatcctgcactatttgcagcacgcagaagctgaaataccaccagaa
ctgtgtgatattactgccaaggtactagaggctgaagaagagaagaaactttcaaggcca
ctgtgtgcctatcttaaaacatttgggatttgcaagaatagaacagcgtgtccagattgt
catcaaattaattttgaaatagatgtgccccagaatatactagacaaaattacacaaaca
tctggatgtgtgacaatactgcctctccacattgtaaatgcaacaaactactttggtcga
atagtagataaacaaaaggatcaatataccactcttgctaaagaaatgaatgagtatttt
aagaaacctggtagtaagatttcagttgaaaatgtggagaagctagcattgtatggatta
tgtgaggaaacacattttcacagggttcaggtggtagagatttccccaaaagaagaggaa
aattcgttctttagtgtcaaagttaaatatatagatgaaggcagaacaagtcaagttcag
aactatcagctgcttcacttacctgcaaggtttcagtgtctgccgcctcaggctgtggaa
tttgtggtttgtagactgaaacccattgataacgaaatagaatggaacccaaaggtaact
cattatattgattacaaaattaaaggaaaactacatgaagcaaaaatagtacttaccttg
ggaaatacagcttgggttgacccaatggtccgggttgccaggcttccaggtttgaacatg
tctgtcagcgaatacaacgttcggtctgagattttgtctacgggtctgggaactgacaat
ccggaacatataacgcaacttcagaagctgtgcagacacatgaaagtattagataattca
aagaacttggagcatttaagcataaaagagaatgcagctggtccagaggatgcatccaat
ccacagaatatgtccatgcaagaaaattctactgggaactctaattcttccaaaattaca
cctgggaatcatccatgtgatgatgtagctcaaactaaggaagcagaagactctaccctg
catcagcataaatgctttaatccagaaataaagtggtatcaaaatgaagagactgttaca
gtgaaggtaaaaatagcaagtgtggctgactgtaaatgtgagttctctggaaagaaggtg
gttttcagtgcttattcaggagacaaacgttatttggctgacatggagctacatcgagat
atacttgcagaaaagtctacctgtgtgattaaggaaacagaggttattattgttcttgtg
aaggagaataaagaaatgtggtgcaaattactgaagaacaagaatcttcatgtgtctttt
gattttgaacactgggaagactttgaagacaaaagcccttttccagttggtaataaaaaa
tggcattgcactgatgcagtgactgaagaattggtggactcctcagaagacagtggaaca
gaaagtgatgattaa
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