Columba livia (rock pigeon): 102093576
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Entry
102093576 CDS
T02912
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clv03016
]
102093576 (TARBP1)
03036 Chromosome and associated proteins [BR:
clv03036
]
102093576 (TARBP1)
Enzymes [BR:
clv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
102093576 (TARBP1)
Transfer RNA biogenesis [BR:
clv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102093576 (TARBP1)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102093576 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
RHH_9
Motif
Other DBs
NCBI-GeneID:
102093576
NCBI-ProteinID:
XP_005508701
UniProt:
A0A2I0MUX6
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MQFWETYILVMETLEGNQIHVIKPVLPKLNSLYEHAISGEKGCWLFHPSWHMCIYKRMFE
SENKTLTKEGILHFLELYETKHLPNALGFSEFVIGPLMDALSESSLYSRTPGQLMGSCPP
LGIRLQKFLATYLMLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALAYIPACKVLGA
EGLHALRDVLQCTMITHQILLRGAAQCYLLQTAMHLTDVAKVSLPEVSSFLLSLRPEESL
RRDTILWMELCSWLQVNDRCFRKSVTSDFEHQETSSLYQYVRSLVREYLKTPVSERESCS
MPDWFEAKLVATMILLAADVEQMRNKCSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPT
LKTDKSLQLLLKLLQTRSLKCSNTQDDGVLFFIWKSLMTPVESILEFILRQLTTNELSTV
GDLDRCDLYLAIIPEIVNLCLQVSWKKVPSIKNFILSLTNASICNLQEKKYEEEPKLKEQ
IKKVASMASLTAVCEILDQKPDARLESPPSVDALRRFISFSRFNEILKKPSYIEEKSSLC
EETTSQGWGKIVARYVHDQWICLRFVLNLFPTLAQEHEETSEMSLFTVERSRKILESALE
ALTILPSDQVLPVFDCMKVLVPKLLDSAESLCIEAFDLAWKIISSLSNTQLIFWSNLKAF
VQFIFDTEVLAVAASAKQQAYGKIKEIIFRLIDMSTTKTGVFNVVLSHCCQSWIFPTVDE
GSALTNAFLNAGNYCELITEACVFGTVFRRDQRLIQDVHAFIENLGEKCAANVVTESTNR
DDHYVRVCAIKFLCLLDGSNILHKTFMEDIFIKLLDKDELVSRSRTRYYANSLQHRIKNR
VWQTLLVLLPKLDQNFLCGILDKVFQAGFDNNQASVKYFIEWIVILSLHKYPQFLNKFWD
CFCYGEEKLKTSICTFLSVLSHFDIILQNTSEKKPALKKALIVVLQWCFNHNFSVRLYAL
VALKKIWGMCRMLHVEEFEALTPVIESSLQQVENMHGTGXXXXXWQRIQDHFFFATFHPL
EDYSLETIFYTLPRLSELAEDEWISLTKFDRFTDVPLPSTFQWYHSRMELLDLKPSDWSQ
QDMGSNSIETDSQTEWTDVQKKIIPWKNSTPSLDLEMVFQDRATKLGKSNSRLIVVASLI
DKPTNLGGLCRTSEIFGASALVVGSLHYVQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQ
QKKMEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGI
IRSLNVHVSGALLIWEYTRQQLIKQKQQK
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttgggaaacttatattttggtaatggaaactttggaaggaaaccagatccat
gtcataaagccagtattacccaaactaaacagcttgtatgagcatgctatatcaggggaa
aaaggttgttggttgtttcacccatcatggcacatgtgcatctataaacgaatgtttgag
agtgagaataaaacattgacaaaggaaggcattcttcattttctggagctttatgaaaca
aagcatctgccaaatgcacttggtttttcagagtttgttattggaccattaatggatgcc
ctctcagaaagttccctctatagcaggacaccaggtcagttaatgggatcctgtcctcct
ttgggaataaggctacagaagtttttggctacttacctcatgcttcttccagaggaagaa
aaaggtagtttcctgctaaaatttattcagaagatgacaagtagacattggtgtgctgtt
cccattttgtttctttctatggctctggcatatatccctgcatgtaaagtcctgggcgca
gaaggacttcatgctttaagagatgtcctccagtgtactatgattacacatcagattttg
ttgcgtggagctgctcagtgctatcttcttcaaacagctatgcatttgacagatgtggct
aaagtgtccctcccagaagtttcaagctttcttctgtcccttagaccagaggagtcgcta
aggagagatactattttatggatggagctttgcagttggttgcaagtaaatgacagatgc
ttcagaaagtctgtaacttctgattttgaacatcaagaaacatcgtcattatatcaatat
gtacgcagtcttgtgagagagtaccttaagacaccggtatctgaaagagaaagttgctct
atgccagactggtttgaagctaagcttgtcgcaacaatgattctattggcagcagatgtg
gagcagatgaggaataaatgcagtggaaaaagcaacatagaatggattgaactagaggct
ttcttgaaccctcttctggatgtcttgatgaaacttggcagtaatgcttacataccaaca
ctgaaaacagataaaagcctacagcttctcttgaagttattgcagacccgttcgttaaaa
tgttccaatacacaagatgatggggtattgttttttatttggaaatctctaatgacacct
gtagagagtattcttgagtttattctccgacagcttactacaaacgagttaagcactgtt
ggcgacctggatcgttgtgatctatacttagctataattccagagatagtgaacttgtgc
ttgcaagtcagctggaagaaagtaccatctatcaaaaatttcattttgtccctgacaaat
gcatccatttgtaatcttcaggagaaaaaatatgaagaggagccaaagcttaaggaacaa
attaaaaaagtagctagcatggcatcacttacagcagtttgtgagatactggatcagaaa
cctgacgcacgccttgaatctccgccttctgtggatgctctgaggagatttatttccttt
tctcggttcaatgaaatattgaagaagccatcttatattgaagaaaaaagtagcttatgt
gaagaaacaacatcccaaggatgggggaaaattgttgcacgctatgttcatgaccagtgg
atttgccttcgttttgttttaaatttatttccaacactggctcaagagcatgaagaaact
tcagaaatgtcattatttacagttgaaaggtcaagaaaaattctagagtctgcattagaa
gccctaacgattcttccttcagaccaagttctacctgtatttgactgcatgaaagtcctt
gttcccaagcttctggactcagcggagtctctctgcatagaagcatttgatttggcttgg
aaaattatatcctctttgagcaacacacagctaatattttggtccaatctaaaagctttt
gtgcagttcatctttgataccgaggttctagctgtggctgcaagtgcaaagcagcaagca
tatggcaaaataaaagagataattttcaggctcatagatatgtccactacaaagactgga
gtcttcaatgtagttcttagtcattgttgtcaatcctggatatttcccactgttgatgag
ggaagtgccttgacaaacgctttcttaaatgctggaaattattgtgaacttatcactgag
gcttgtgtctttggaactgtgtttaggagggatcaaagacttattcaggatgtgcatgcc
ttcatagaaaatcttggagaaaaatgtgctgcaaatgttgttacagaaagtacaaatcga
gatgatcactacgttcgggtttgtgctattaaatttctgtgcttgttggatggatcaaat
atcttgcataagacgttcatggaagacattttcatcaaactgcttgataaagatgaactg
gtatccagatctagaacacgctattatgcaaactctttacagcataggattaaaaaccgg
gtatggcagacactccttgttcttcttccgaagcttgaccagaattttttgtgtggaatc
cttgacaaagttttccaggctggatttgataacaatcaggcatctgtgaaatacttcata
gaatggattgttatcttgagtctacataaatacccccaattccttaataaattctgggat
tgcttttgctatggtgaagaaaagcttaaaacaagcatctgcacgtttttatcagtgtta
tcgcactttgacatcattcttcagaatacctcggagaagaagccagctttgaagaaggct
ctcatagttgtcctgcagtggtgtttcaaccataatttcagcgttcgactttatgcgtta
gttgccctcaaaaaaatctggggtatgtgcagaatgttgcatgtggaagaattcgaagct
ctgacacccgttattgaatctagccttcaacaggtggaaaacatgcatggcacaggnnnn
nnnnnnnnnnnctggcagcgaatccaagatcatttcttctttgcaacatttcatccactt
gaggattatagtctagagacaatattttacactcttccccgtctttcggaacttgctgaa
gacgaatggatctcgcttactaaatttgacagattcactgatgttcctttgccatcaacg
tttcagtggtatcattctcgaatggaacttcttgatctgaaaccaagtgactggtctcag
caagacatgggttcaaattcaattgaaacagatagccagacagaatggactgatgttcag
aaaaagattataccctggaagaacagcactcctagtttagacctggaaatggtatttcag
gatcgtgctactaaacttggtaaatcaaacagcagactgatagtggtggcttcgcttatt
gataaacctaccaatttaggaggtttatgtcgtacaagtgaaatatttggggcatctgca
ctagttgtcggcagtcttcattatgtacaggataagcagttccagcatcttagtgtttct
gcagagcagtggctccccctggttgaggtgaaaccatctcagcttgttgattatttacaa
cagaaaaaaatggaaggctacactattattggtgtggagcagactgctaaaagttttgat
cttacagagtattgcttcccagagaaatcactgttattgctgggaaatgaacatgaagga
atcccagcaaacctgattcaccacctcgatgtgtgtgtggaaattcctcagcagggtatt
attcgatcactcaatgttcatgtaagtggagctctgctgatttgggagtacacaaggcaa
caactgatcaagcaaaaacaacaaaaataa
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integrated database retrieval system
