Columba livia (rock pigeon): 102093753
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Entry
102093753 CDS
T02912
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102093753 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clv03021
]
102093753 (TAF5)
03036 Chromosome and associated proteins [BR:
clv03036
]
102093753 (TAF5)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102093753 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
102093753 (TAF5)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102093753 (TAF5)
STAGA complex
102093753 (TAF5)
TFTC complex
102093753 (TAF5)
SAGA complex
102093753 (TAF5)
SLIK complex
102093753 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
102093753
NCBI-ProteinID:
XP_021151563
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MKLQKLCHVLLREPCFTSGAVSCCIFADSCRLSCKLLLYANGFAVGGGVAVEDQPDVSAV
LSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAK
SFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHL
QEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPE
FDVPLDDEDEEGENEEGKPKKKKPKKDSGGSKSKKQDPNAPPQNRIPLPELKDSDKLDKV
MNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTP
KKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSC
SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR
IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG
RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNTVRLWDAV
KAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcagaaactgtgtcatgttttactgagagaaccttgctttaccagcggagct
gttagctgctgtatatttgctgactcttgcaggctgtcttgcaagctcttgttatatgct
aatggttttgcagttggaggtggtgttgctgtggaagatcagccagatgtgagtgcagta
ttgtcagcctacaatcagcagggagacccgacgctgtacgaggagtactacagtggatta
aaacacttcattgagtgttccctggactgtcatcgggcagaattgtctcagctgttttat
cctctctttgtgcacatgtatttggaattggtctacaatcaacatgagagtgaagcaaag
tctttttttgaaagatttcatggggatcaggagtgctattaccaggatgacctgcgtgta
ttatcgagcttaaccaaaaaagaacacatgaaaggtaacgagaccatgctggatttccga
acaagcaagtttgtgctgcgtatttcccgtgactcttatcagctcttgaagaggcatctt
caggaaaagcagaacaatcagatctggaacattgttcaggaacatctttacattgatatc
tttgatggaatgcctcgcagcaaacagcagatagatgctatggttggaagcttggctggg
gaggcaaaacgagaggctaataaagcaaaggttttctttggcttattgaaagaaccagag
tttgatgtgccattggatgatgaagatgaagaaggagaaaatgaggaaggaaagccaaag
aagaaaaaacctaaaaaagatagtggagggtccaaaagtaaaaaacaagaccctaatgct
cctccccaaaatagaattcctctgcctgaactgaaagattctgacaagctggataaagta
atgaatatgaaagaagctgcaaggcgtgtgcgtcttggtccagagtgcctgccctccatc
tgtttctatacgttccttaatgcttaccagggtctgactgcagtggatattacagatgac
tcaagcatgattgtaggaggctttgctgactctactgtcagagtgtggtctgtgactcca
aagaagctacgtagtgtgaaaacagcagcagacctcagtctcatcgacaaagaatcagac
gatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaagattttatatggt
cacagtggacctgtctatggcaccagcttcagtcctgataggaactatctgttgtcctgt
tctgaggatggcactgtcagattgtggagtctccaaacattcacatgtttggtgggatat
aaaggacacaactatccagtatgggatacgcaattctctccttatggttattactttgtg
tcagggggacacgacagagtggctcgcctatgggcaacagatcactaccagcctttacgg
atatttgctggccatcttgctgatgtgacatgcacccgattccatccaaactccaactat
attgccacgggctctgcagacaggactgtacggctctgggatgttttgaatgggaattgc
gtaagaatattcactggacataagggaccaattcattcattggcattttctcctaatgga
cgattcctggctactggagcaacagatggaagagttctgctgtgggatattggacatggc
ttgatggttggagaattaaaaggtcacactgacactgtctatgcgctcagattcagtaga
gatggggaaattttagcatcaggttcaatggataacacagttcgtctgtgggatgctgtg
aaagcatttgaagatttagaaactgatgactttaccacagccactggacatataaacttg
cctgaaaactctcaggacttgttattaggtacatacatgaccaagtcaaccccggtcgta
catctccatttcacacgcagaaacttgctgctggcggcaggagcctacagctcacaatga
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integrated database retrieval system
