Columba livia (rock pigeon): 102093805
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Entry
102093805 CDS
T02912
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clv00536
]
102093805 (COL13A1)
Glycosaminoglycan binding proteins [BR:
clv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102093805 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102093805
NCBI-ProteinID:
XP_021148562
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MSYCQKEDREGMLEEKSWEGVGETAFDRGCVAPPRTGEGERCCRLPLLLGSGLPGVSLLS
LVLSLLLYFRTSDLQSRVSHLEADRPTRLPAWLSADQMETAILGRVDQLLDEKLKFHLPR
HREVRDTHQRCSCPAGPPGDKGAMGIPGRPGLKGQPGEKGAPGAAGMSVIGPRGPPGQPG
TRGFPGFPGPIGLDGKPGHPGQKGEMGAAGPRGQPGPPGQKGEKGQCAEYPHRLLPLLNS
VRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPIGPAGPEGTPGQPGPVGPPGRAGEP
GKPGRDGKGLPGPPGPKGDPGVQGYPGRKGERGMPGLPGRHGSKGAPGVATAGMKGEPGT
PGEKGDPGVPGRMGPPGLPGKRGQRGEKGRAGDPGLPGLPGMKGDKGSAENALVGTKGEP
GPPGLPGPPGPKGEAGDIGWPGTAGPRGEKGERGSPGDQGPMGPRGPKGEPGKDEMMDYD
GNISEALQEIRTLALMGPPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEMGP
PGLPGRDGPPGIKGEPGHVGATGEKGEKGEPGQAGSPGLDGPTGEKGERGDQGIPGPSGL
PGPIGLPGLTGEKGEPGERGNKGNPGESIPGPPGPQGPPGPPGLQGLPGPKGEAGIDGMK
GEKGAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVSGPAGPKGERGSKGDPGIAGPM
GPAGLPGLQGLPGDKGVRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagctactgccaaaaagaggacagggagggaatgttggaggagaagagctgggaaggt
gtcggcgaaacagcttttgacagggggtgcgtggctccccccaggaccggcgaaggggag
agatgctgccgcctccctctcctgctgggctcggggctgcccggcgtctccctgctctct
ctggtgctgagcctcctgctgtactttcggacctccgatctgcagtcccgcgtgtcccac
ttagaagcggacagacccacacggctccctgcctggctctcagcagaccaaatggagaca
gctattttgggaagagttgaccaactgcttgatgagaaattaaagttccacttgccgaga
catcgagaagttcgagacacacaccagcgatgcagctgcccggcaggtccgcctggagac
aaaggtgcaatggggatccctgggcggccgggactaaaagggcaacctggagagaaggga
gctccaggagcagcgggcatgtctgtcatcgggccccgcggtccacccggacagcctgga
acgagaggtttccctggattcccgggccctattggcttggacggtaaaccgggtcatcct
ggacagaagggagagatgggtgccgcaggtcccaggggacaacctggacccccaggacaa
aaaggagaaaagggtcagtgtgcagagtacccgcacaggctgctgcctctcctcaattcc
gtgcggctggctccacctccggtcataaagagacgcactttccagggtgaacaaggacaa
gcaggaatccaaggtcccccgggaccccctggccccccagggcccattggaccagcagga
cctgagggaaccccaggacagcccgggccagtggggccacctggcagagcgggagaacct
gggaagcctggcagggatggaaagggcttacctgggcctcctggaccgaagggagaccct
ggggttcagggataccccggcagaaagggggagagaggcatgccggggctgccaggaaga
catggctctaagggcgctccgggggtggcgaccgcagggatgaagggcgagcctgggact
ccaggagaaaagggagatcctggagtcccagggaggatgggccccccaggtttgccaggg
aagagggggcagcggggtgagaagggacgcgctggtgaccctgggcttcctggactccct
ggcatgaagggagataagggaagtgctgagaatgccctggtgggaactaaaggagaacct
ggccctccaggtctgccagggccccccggaccaaagggagaagctggtgacattggctgg
cctggcactgcagggccacggggagaaaagggggaacgtggttcaccaggagaccaagga
cccatgggcccaaggggccccaaaggagagcctgggaaggatgagatgatggactatgac
ggtaacatcagtgaggctctccaggaaataagaactttggccttgatgggacccccagga
ctgccaggtgtggctggacctccagggccaccaggacagaagggtgaaattggcttgcca
ggtcctccaggccacgatggagaaaagggaccacgtggcaagcctggagaaatgggtcct
cccggactgccaggaagggatggaccacctggaataaagggagagccaggccatgtcggg
gccacaggagaaaagggcgagaaaggagagccaggacaagccggctcaccgggtcttgat
ggccccactggagagaaaggcgagcgaggcgaccaagggattccaggaccgtcaggattg
ccgggtcccattggacttccaggattgacaggagagaagggcgagcctggggagcgcgga
aacaaaggcaatccgggagaatcgatacctggtccccctggaccccaaggcccaccagga
cctccaggtcttcagggcctcccagggccgaagggggaagcagggattgatggaatgaaa
ggagagaagggtgcccagggtgaaaaaggagacagagggccactgggattacccggtgct
tcaggtttagacggcaggcctggaccaccgggcactccaggaccaatcggggtttcggga
ccagcaggaccaaaaggagaaaggggcagtaaaggagaccctggaattgcaggaccaatg
gggcccgcggggcttcctggtttacaaggtctacctggtgacaaaggagtccggggggag
aggggcaagaaaggctctagagggtctaaaggggataagggagaccaaggagcgcctgga
ttagatgcaccctgtccgttgggggaagatggccttccagttcaaggctgctggaataag
tga
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