Columba livia (rock pigeon): 102093881
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Entry
102093881 CDS
T02912
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102093881 (CTCF)
03036 Chromosome and associated proteins [BR:
clv03036
]
102093881 (CTCF)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102093881 (CTCF)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102093881 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
102093881
NCBI-ProteinID:
XP_005512673
UniProt:
A0A2I0LMM1
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MKRTNQSRQKCRSVKNINQEAEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIAPNQADGGEVVQDVNSGVQMVMMEQLDPTILQMKTEVIEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEEEPMICHTLPLPE
GFQVVKVGANGEVETLEQAELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVD
VSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLD
RHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRR
YKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS
GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY
IEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKP
YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDG
GEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQE
EAPAPPPSKKRRGRPPGKAATQPKQSQSAAIIQVEDQNTGEIENIIVEVKKEPDAETVEE
EEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaagaacataaatcaggaa
gctgaaatggaaggtgaggcagttgaagcaattgtggaggaatcggaaacatttataaag
gggaaagagagaaaaacctatcaaagacgccgtgaaggtgggcaggaggatgatgcttgt
catatagcaccaaaccaagcagatggaggggaagtagtgcaggatgtcaacagtggtgtg
cagatggtgatgatggaacaactggatccaactattctccaaatgaagactgaagtaata
gaaggtgcagtgcctcaagaaacagaggccacagtggatgatacacagatcataacactt
caggttgttaatatggaagagcagcctataaacctgggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacatctgtggaagaacttcagggagcttat
gaaaacgaggtttccaaagaggaagaacccatgatctgtcacaccctccctttaccagaa
ggcttccaggttgtgaaagtgggtgcaaatggtgaagtggagacactggaacaagctgaa
cttcagccacaggaagatcccaattggcaaaaagatccagactatcagccaccagccaaa
aaaacgaagaaaaacaaaaagagtaaacttcgctacaccgaggaaggcaaagatgtggat
gtctctgtctatgactttgaagaggagcagcaggagggtttattgtctgaggtcaatgca
gaaaaggtggtgggcaatatgaaaccaccaaaaccaacaaaaatcaaaaagaaaggtgta
aagaagacattccagtgtgaactgtgcagttacacttgtccgcgtcgttccaacttggac
cgccacatgaaaagccacactgacgaaagaccacacaagtgccacctctgtggcagggcc
ttccggacagtcacattgctgaggaaccacctcaacactcacacaggtactcgccctcac
aagtgcccagactgtgacatggcctttgtgaccagtggagagttggttcggcatcgccgc
tacaaacacacccatgagaaaccattcaaatgttcgatgtgtgattatgccagtgtggag
gttagcaaattgaaacgccacattcgttctcacactggagagcgcccgttccagtgcagc
ttgtgcagctatgccagcagggatacctacaaactgaagaggcacatgaggactcactct
ggagagaagccatatgaatgttacatctgccatgctcgcttcactcagagtggtaccatg
aagatgcacattttgcagaagcacacggagaacgtggccaaatttcactgtcctcactgt
gatactgttatagcgagaaagagtgacttgggtgtccatttgcgaaagcagcattcctac
atcgaacagggcaagaagtgtcgctattgtgacgctgtgtttcatgagcggtatgccctc
atacagcatcaaaagtctcacaagaatgagaagcgcttcaagtgtgaccagtgcgattat
gcatgcagacaggagcggcacatggtcatgcacaaaaggacccatactggagaaaagcct
tatgcctgtagccattgtgataaaaccttccgtcagaaacaactcctcgatatgcacttc
aaacgataccacgatcccaactttgtccctgctgcctttgtctgttccaagtgtggcaaa
acattcactcgcaggaacacaatggccagacatgctgataactgctctggcctagatggt
ggggaaggagagaatggaggagagacaaagaaaggcaaacgtggccggaagagaaagatg
cggtctaagaaagaagattcctccgatagtgaggaaaatgctgaaccagatttggatgat
aatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaagttgagcaagag
gaggctcctgcaccacctcccagtaagaaaagaagaggaagaccaccaggcaaagctgcc
acccaaccaaaacaatcccagtctgcagcaatcattcaggttgaagaccagaacactggt
gaaatcgaaaatattatagttgaagtaaagaaagaacctgatgcagaaacggtagaggaa
gaggaggaagctcagcctgctgtagtggaagctcccaacggagacctcactcctgagatg
attctcagcatgatggaccggtga
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integrated database retrieval system
