Columba livia (rock pigeon): 102094190
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Entry
102094190 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
102094190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102094190
Membrane trafficking [BR:
clv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102094190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
RGS
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
102094190
NCBI-ProteinID:
XP_021153834
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
APSSGLGIVGSQQARRPPQARSLTGSPSHPSAGLVQRCVIIQKDQHGFGFTVSGDRVVLV
QSVRPGGAAMKAGVQEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLLGSPPPSVGL
SGSQQDVSTSGGPPPPPPPPPPPPQRITDPKPLQDPEVQKHATQILRNMLRQEEAELQRF
CEAYSRNPASAVEEQIEGARRRVSQLQLKILQETGGSVDLGRPGGDSGSAGFRAAEGELC
RGLGPTLRPHQISLSRNSVLSDHGLDSPRTSPVITARLFQHHRRQGSDTLFTPVAEQVLD
RPGRAHIIAPEEDYEPGYFNNESDSLFQDLAKLKSRPAHLGVFLRYIFSQADPSPLLFYL
CVDVCQQTASKDSRLLGKDIWNIFLDRNAPLRVKVSEQLLAEIESRLRNGDDVRAALFEA
QEMVMPEIQEQIQDYRTKRTMGLGSLYGENDLLDLDGDPQKERQVAEKQLAQLGDILSKY
EEDRSSPMAFALSTYMSHTGIRSREPRVAGAGEKAPSLPDRDKWLPFFPKTKKSSSAKKD
KDAVEDKKRNPILKYIGKPKISQSTFHVPLSPVEAVKPGNVRNIIQHFENNQHYESQEPG
AQRLSTGSFPEDLLESDSSRAEVKLGRSESLKGREEMKKSRKAENVPRSRSDVDMDAAAE
ATRLHQSASSSASSLSTRSLENPTPPYTPKMGRRSIESPNLGFGMDPFLPHLLEDEQGQL
SDLEPELDAQNWQHTVSRELVANLPQKEIDRQEVINELFATEWSHLRILRVLDLLFYQRM
KKEGLLSREELALLFPNLPELIEIHNSLSESMKKLREEGPIIKEIGDLMLSRFDGLAKEE
IEQVAADFCSYQSIALELIKTKQRKETRFQIFMQEAESNPQCRRLQLKDLIISEMQRLTK
YPLLLENIIKHTEAGTSEHEKLCRARDQCRDILKYVNEAVKRAENRHRLEGYQKRLDATS
LERTSNPLAAEFKSLDLTSRRMIHEGPLTWRIGKDKTVDLHVLLLEDLLVLLQKQDEKLV
LKCHSKTALGSSDNKQSFSPVLKLNALLIRSVATDKRALFIICTSELGPQIYELVALTSS
EKNTWMERLGGGGAGNWGNNPVLTGSLGTPGVSGTLCGVSSICPGVGAAPAPPAPARVLT
CSPRPRSLVLQDPDVSPVLSRGTSSSAEPEPEESCSAHDNPTALLSEEQPPALLEEPASS
EAEEEDEEPPAAPLPVGTKGGAXHPPGRAVGATNHLLLPGPSGTEGLADAALEDVENLRL
LILRRLLPCRDAEPEDDVTPTPSVAGGSSQAWDSVLSSQDSASQEVLGEPPGASEDTTPP
SSREEPGPAAEEPSGYKVVRKAQAEGAKEATPSPGSSQSETELQEGGGANVDGKETPQSR
SPDLAAGPHVPISPSGLMSPCPLTGAVFSKGTQVPGRGDTVTWNECPLGGAPCP
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
gcacccagctctggcttgggaatagtggggtcccaacaagccaggcgcccaccccaggct
cggagcctcactggttctccctcccatccctccgcaggtctggtccagcgctgcgtcatc
atccagaaggaccagcatggcttcggcttcaccgtcagcggggaccgcgtcgtcctggtg
cagtcggtgcggccagggggggctgccatgaaagccggggtgcaggagggggatcgcatc
atcaaggtgaatggcacgatggtgaccaacagttcccacctcgaggtggtgaagttgatc
aagtccggtgcttacgtcgctctgaccctcctgggctccccccctccctcagtggggctc
tccggctctcagcaagacgtgagcacatcggggggtcccccgccgcctccgccaccgccg
ccccccccgccgcagcgcatcaccgaccccaagcccttgcaggaccccgaagtccagaag
cacgcgacgcagattctccggaacatgctgcggcaggaggaggctgagttacagcgcttc
tgcgaggcgtacagccgaaacccggccagcgcggtggaggagcagatcgagggggcgcgc
cggcgggtcagccagctccagctcaagatcctccaggagaccggtggctccgtggatttg
gggcggccgggcggcgactccggctcagccggtttcagggcagcggaaggtgagttgtgc
cgcgggttgggaccgaccctgcgtccccatcagatctccctgagccgcaactccgtcctc
tccgaccacggcctggacagcccacgaacctccccggtcatcaccgcccgcctgttccag
caccatcgccggcagggatccgacaccctcttcacccccgtggccgagcaggtcttagac
cggccaggacgagcccacatcatcgcgccggaggaggattacgagccgggatatttcaat
aacgagagcgactcgctcttccaggacctggccaagctgaaatcccggccggcacacctc
ggggttttcttacgctacatcttctcccaggcggaccccagccccctgctcttctacttg
tgcgtggatgtttgccagcagacggccagcaaggattcccggctcttggggaaggacatc
tggaacatcttcctggacaggaacgcgcctctgcgtgtgaaggtgtcggagcagctcctg
gccgagatcgagagtcgcctgcggaacggggacgatgtccgagccgccctctttgaagct
caggagatggtgatgcccgagatccaggagcagatccaggattacagaacgaagcgcacc
atgggcctggggagtctgtacggggagaacgacctcctggacctggatggggacccccag
aaggagcggcaagtggccgagaagcagctggcacaactgggcgacatcctgtcaaaatac
gaggaggacaggagctcccccatggccttcgccctcagcacctacatgagccacaccggc
atccgcagccgtgagccccgcgtggccggtgccggggagaaggcaccatccctcccggac
agggacaagtggctgcccttcttccccaagaccaagaagagcagcagcgcgaagaaggac
aaggatgctgtggaagacaagaagcgcaaccccatcctcaagtacattgggaagcccaaa
atctcccagagcacatttcatgtccctttgtcccccgttgaagcagtcaaacccggcaat
gtgaggaacatcatccagcactttgagaacaaccagcattacgagagccaggagcccggc
gcccagcgcctctccaccggcagcttccccgaggacctgctggagtcagacagttcccgt
gccgaagtcaagctgggccgctcggagagcttgaaaggccgggaggagatgaagaagtcg
cggaaagcagagaacgtgccgcgctcccgcagcgacgtggacatggacgcggcggccgag
gccaccaggctgcaccagtcggcgtcgtcctccgcgtccagcctgtccacgaggtcgctg
gaaaatcccacccccccatacacgccgaagatgggccgcaggagcatcgagtcgcccaac
ctgggtttcggcatggatcccttccttccccatctgctggaggacgagcagggccagctc
tccgacctggagcccgagctggacgcccagaactggcagcacacggtcagccgggagctg
gtggccaacctgccgcagaaggagatcgatcggcaagaggtgatcaacgagctctttgcc
accgaatggtctcacctccgcatcctccgagtcctcgacctccttttctaccagcggatg
aagaaggagggcctgctgtcccgggaagagctggcgctcctcttccccaacctccccgaa
ctgattgaaatccacaattctctctccgaatctatgaagaagctccgggaagaaggacca
atcatcaaggaaattggggatctcatgctgtctcggtttgatggcctggccaaagaggag
atcgagcaggtcgctgccgacttctgctcgtaccaatccatcgccctggagctgatcaaa
accaagcagcgcaaggagacccgtttccagatcttcatgcaggaagcggaaagcaatccg
cagtgccgacgcctgcagctcaaggacttgatcatctctgaaatgcagcgcctgaccaag
tacccgctgctgctggagaacatcatcaagcacaccgaggcgggcacctcggagcacgag
aagctgtgccgagcgcgggaccagtgccgggacatcctcaagtacgtcaacgaggccgtg
aaacgagcggagaaccggcaccggctggagggttaccagaaacgcctggacgccacctcg
ctggagaggaccagcaacccgctggccgcggagttcaagagcctggacctcacgtcccga
cgcatgatccacgaggggccgctcacctggcgcatcggcaaggacaagactgtggacctg
cacgttctgctcctcgaggacctcttggtgctgctccagaagcaggacgagaaactggtg
ctcaaatgccacagcaaaacagcgctgggctcctcggacaacaagcagagcttcagccct
gtcctcaagctcaacgcgctgctcatccgctccgtggccacagataaacgagcccttttc
atcatctgcacgtcggagctgggaccccagatttacgagctggtggcgctgacgtcctct
gagaaaaacacgtggatggagcggctgggggggggcggggctgggaactggggcaataac
ccagtgctgacaggttccctgggaactccgggggtgtctggcaccttgtgcggggtctcc
agcatctgccctggggtgggggctgcccctgcgcccccagctcctgctcgtgtcctgacg
tgctctccccgtccccgcagtctggttttacaggaccccgacgtgtcccccgtcctgtcc
cgaggcaccagctccagcgcagagcccgagcccgaggagagctgctcagcccacgacaat
cccactgcgctcctgagcgaggagcagcccccggcgctgctggaggagccggcgagcagc
gaggcggaggaagaggatgaagagccgcctgcagcccccctgcccgtggggacaaaaggg
ggcgcctgacaccccccgggccgagcggtcggggccaccaaccacctactgctgccagga
cccagcggcacggaggggctggcagatgcggcactggaggatgtggaaaacctgcggctc
ctgatcctgcggcggctcctgccctgccgggacgcggaacccgaggatgacgtgacaccc
acgccgtcggtggccggggggagcagccaggcctgggactcggtgctgtccagccaggac
tcggcgtctcaagaggtgctgggggagcccccgggcgcctctgaggacacgacccccccg
tccagccgggaggagccgggtccggctgctgaggagccgagcggctacaaagtcgtccga
aaagcccaggcggagggtgctaaggaggccacgccctcgccaggcagcagccaatcagaa
actgagctgcaggaaggaggcggagctaatgtagatggtaaagagaccccccaatcccgg
tccccagacctggcagcgggaccccacgtccccatatccccatcagggctgatgtcccca
tgtcccttgacaggagctgtgttctcgaaggggacacaagtccctggcaggggggacact
gtcacttggaatgagtgtcccttggggggggcaccgtgtccctga
DBGET
integrated database retrieval system
