Columba livia (rock pigeon): 102094270
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Entry
102094270 CDS
T02912
Symbol
UBE4B
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04120
Ubiquitin mediated proteolysis
clv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102094270 (UBE4B)
04120 Ubiquitin mediated proteolysis
102094270 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102094270 (UBE4B)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102094270 (UBE4B)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
U-box type E3
102094270 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
102094270
NCBI-ProteinID:
XP_021137481
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRETPPAGAPAPGPSHSLGLNVHSMTPA
TSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVD
SGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFLNSL
SAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSL
ILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTTFTSYVPMTGSSLTPPASSVATT
SVPPITASSHLTAASPSGTQPSSPSIYDNPFSLLLLAVSDVSEDSSDEENEDDEFSCVQF
GSSMGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQL
LSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVF
KQIFVPILQGLAAASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKS
LSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELA
RQELFKILHSILLNGETREAALNYMAAIINANTRGPSPCTDDRLVSTDGFMLNFLWVLQQ
LSTKIKLETVDPMYIFHPRCRIDLPTDETRVKATMEDVTAWIAELHRDPSPFSEPKFPTE
CFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRC
KAQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLPLTPDVPKV
FAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVE
VMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHI
STIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMK
NKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPR
LAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQR
SYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPL
MDTLMTDPVRLPSGTIMDRSIXXXXXXXXXXXXPFNRQTLTENMLEPVPELKEQIQAWMR
DKQNADH
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagattcgtcggaggcgccttgctcggctggcggggggc
ccgtcctcccaacccaccacgccgctcacgtccccccagcgagagaccccaccggccgga
gctcccgccccggggccatcccatagtctaggcctaaatgtccacagcatgaccccagct
acctctcctataggtgcatcaggagtagcccaccgaagccagagcagcgaaggagtgagt
tcactcagcagttctccatctaacagccttgaaacacaatctcagtctctgtctcggtct
cagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaggtagatgtggat
tcaggaattgaaaacatggaggttgatgagaacgatcgcagagagaaaaggagcctgaca
gataaggaacctctgtctgggtctgaagtatcagaggaacaagctttacagctggtctgt
aagatcttcagagtgtcttggaaggaccgagacagagatgttatcttcctgaattcgctc
tctgctcagtttaagcagaacccaaaggaagtgttttcagattttaaggacttaattggg
cagattttgatggaagtgctgatgatgtccacccaggccagggatgaaaacccgtttgcc
agtctgacagccacgtcccaaccgatcgctgcagccgcccgctctcctgacaggagcctc
attttaaacatgggctcgaacccgggaagcagccccatgttctgtaacgtgggctccttt
ggctccagttcgttatccagtctctatgggactagtccagctcctcctaccactttcaca
agctatgtaccaatgactggttcatctcttaccccaccagccagctcagttgccacaaca
tctgtgcctcccattactgccagctctcacctcacagcagccagcccttctgggacgcag
ccttcctctccgagtatatacgacaaccctttctccctcctcctccttgccgtttctgat
gtgtctgaggacagtagtgatgaagaaaatgaagatgatgagttttcttgtgtccagttt
gggtccagtatgggaggctctggcagctccagtgtttccgattcctgcagtgaccacttc
accattgaaaactgcaaggagacagagatgctgaactacctcatcgagtgttttgaccga
gtgggaatagaggagagaaaagcaccaaagatgtgtagccagccaacagtcagccagtta
ctgagcaacatccgatcccagtgcatttcacacgctgctttggtgctacagggatcctta
acacaaccaaggtcattgcagcagcagtctctgctcgtaccatatatgctgtgtaggaat
ctcccatttggcttcatccaagaattggtgagaacgacttatcaggatgaagaggtgttc
aaacagatctttgttcccatcttacaaggcctggctgcagcttccaaagagtgctccctt
gatagtgacaattttaaatacccccttatggcactatgtgaactttgtgaaatcaagttt
gggaaaacgcaccctatgtgcagtttggttgtctctttgcccttgtggttgcccaaatct
ttaagcacaggtgcaggaagagaactgcaaagactttcctaccttggagccttcttcagt
ctctctgtctttgctgaagatgataacaaagtagttgaaaagtacttctcagggcctgcc
attactcttgagaacacccgggttgtgagccagtctttgcaacattacctggaattagca
aggcaagagctgttcaagattctacacagtattttactgaatggcgaaactcgagaagca
gctctcaattacatggcagctattatcaacgccaacacccgtggccctagtccgtgtaca
gacgatcgtttggtatctacggatggctttatgctcaacttcctatgggtactacagcaa
ctaagtacgaagataaagctggaaacggttgatcccatgtacatatttcaccccaggtgt
cgtattgacctcccaacagatgagacaagagtaaaagcaacaatggaggatgttacagcc
tggattgctgaacttcacagggatccgtctccattttctgagccgaaattcccaacggaa
tgtttcttcctaaccctgcatgcccatcatctctcaatcctgcccagctgccgtcggtac
atccgcagactgcgcgccatcagggagctcaacaggactgttgaagatttgaagaacaat
gaaagtcagtggaaggattctcctctggctaccaggcatcgagaaatgctgaaacgctgc
aaggcgcagctcaagaagctggtgaggtgcaaggcttgtgccgatgccggtttgctggat
gaaaactttctcaggaggtgtctgaatttctacggcatggtgattcagctgatgctgcgc
attctcgaccctgcctatcccaacataaaattgcctttaactcctgacgttccgaaggta
tttgcagcattgccggagttttatgtggaagacgttgctgaatttttattttttattgta
caatatgctcctcaggtgctttatgagccctgcactcaggacatagtgatgttcctcgtt
gtgatgctgtgcaaccagaactacatccgaaatccttatttagtagccaagctggtggaa
gtgatgttcatgacaaacccagctgttcagccccggacacaaaagttctttgagatgatt
gagaatcatcctctctccactaaattgttagtcccctccttgatgaagttttacacagat
gttgaacatactggagccactagcgaattctatgacaagtttaccatccgctaccacatc
agcaccattttcaaaagcctctggcagaatatagctcaccatggtacatttatggaagag
ttcaactctgggaagcagtttgttcgctacatcaacatgctgataaatgacacaactttc
ttgctggatgagagtttggagtccctaaaacgtatccatgaagtgcaagaggagatgaag
aataaagaacagtgggacctgctgcccagggatcagcagcaggcccggcaatcgcagctg
gctcaggatgagcgtgtgtctcgttcatatcttgccctggcaacagaaactgttgatatg
ttccatatccttaccaagcaggttcaaaagccttttctcagacctgaacttggaccgcga
ttggctgctatgttgaactttaacttacagcaactgtgtggccccaagtgccgcgacctg
aaagtcgaaaaccctgagaaatacgggtttgaaccaaagaagctgttggaccaactgacc
gacatttacctacagctggattgtgctcgctttgctaaagcaattgctgatgatcagagg
tcctacagcaaagagctctttgaagaggtgatctccaagatgagaaaggccggcatcaag
tccaccatagcaatagagaaattcaaactgctggccgagaaagtggaggaaatcgttgcc
aagaacgcccgtgcggaaattgattacagcgatgctccggatgaattcagagatccgctg
atggacactctgatgactgatcctgtcaggctgccgtccggaaccatcatggacaggtcc
atcatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctttcaatcgccagacgctg
acagaaaatatgctggaaccagtgccagaacttaaagagcaaatccaagcctggatgaga
gacaagcagaacgctgaccattaa
DBGET
integrated database retrieval system
