Columba livia (rock pigeon): 102094406
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Entry
102094406 CDS
T02912
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X2
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102094406 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102094406 (PAN3)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102094406 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
102094406 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
102094406
NCBI-ProteinID:
XP_005501484
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MMQRMTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFIT
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTE
NNLQTPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPVTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADIPAVPAFLPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLV
NTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSAD
AYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVT
GKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENL
QKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEED
LAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWI
DLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtacgcaggccatgatccactaacttcaccgaattcatccttgtttaatgactttgct
gccctaagcgtgtctcaaaggaggaagctggcaaaaccagcatttccttcgttcatcaca
gacttggaggacagatacaatacagtcttgcccaggaagtatcgactggggatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
gctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aataatttacagacaccaaatccgtctgcaagtgagtttattcctaaaggaggatcaacc
tctaggctgagtaatgtatcccagtccagtatgtctgccttctctcaagccttgttctcc
cacccctccatgggaagtcctgccactgctgggctagcaccaggaatgtcactatcagca
ggatcttctcctctccattcgcccaaaataactcctcatacatctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcttctgtc
gctaatgctgtctctcagcctccatctactggccaggtgatccagaaggagacagtgggt
ggaaccacatacttctacactgatacaactccagcacctgtcacaggaatggtttttcca
aactaccacatttaccatccagctgcacctcatgttgcttacatgcagccaaaagcaaat
gcaccttctttcttcatggcagatgaactcagacaggaactgatcaacagacatttaata
accatggcccagattgatcaggctgatattcctgcagttcctgcgtttttaccactgcca
ccacccaatcggatacagaaaacgagcaactttgggtacattacatcatgctataaagct
gtaaatagtaaagatgacctgccatattgccttcggaggatacatggttttcgtcttgtt
aacacgaagtgcatggtattggttgacatgtggaaaaaaattcagcactcaaatatagta
accttgcgtgaagtatttaccactaaagcatttggagaacattctcttgtgtttgcatat
gactttcatgccggaggagagactatgatgagcagacacttcaatgaccctagtgctgat
gcctatttcacaaaacgaaaatggggtcagcacgatggacctctaccacggcagcatgct
ggattgcttccagagtccttgatatgggcatatattgtgcagctcagttctgccttacgg
accattcacacagcagggctggcgtgccgagtcatggatccaacaaagattctagtaaca
ggcaaaacaaggttacgagttaattgtgttggcatctttgatgtgttgacatttgacaac
agtcaaaataatccactggcattaatggctcaatttcagcaagcagatctgatctccctg
gggaaagttgtattggctttggcttgcaattctttgtcaggaattcagagagagaatttg
cagaaagcaatggaactggtgacaatcaactattcctctgatctgaagaatctgattttg
tatttgctgactgaccaaaacaggcttcgcagcgtaaatgatatcatgcctatgattggt
gcacgattctacactcagttggatgctgctcagatgcgaaatgatgttatagaggaagac
cttgcaaaggaggtgcaaaatggaaggttgtttaggcttctagcaaaattgggaacaatc
aatgagaggccagagtttcagaaggacccaacgtggtcagaaactggagacaggtattta
ctaaagctctttcgagatcaccttttccatcaggtgacagaagcgggtactccttggatt
gacctcagtcacattatctcatgtcttaacaagttagatgctggtgtgccagaaaaaata
agcctcatttccagagatgagaagagtgtacttgtggtaacttacagcgatttaaaacgc
tgctttgaaaatacttttcaagaactgattgcagccgcaaatggtcagttgtag
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integrated database retrieval system
